Wall clock time and date at job start Sat Mar 6 2021 15:00:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86304 * 109.46757 * 2 1 4 4 C 1.50697 * 109.47072 * 119.99859 * 2 1 3 5 5 C 1.38329 * 119.87336 * 65.00502 * 4 2 1 6 6 C 1.38003 * 120.12894 * 179.97438 * 5 4 2 7 7 C 1.39400 * 119.86913 * 359.97438 * 6 5 4 8 8 C 1.48277 * 120.12239 * 180.02562 * 7 6 5 9 9 C 1.39505 * 119.97194 * 179.97438 * 8 7 6 10 10 C 1.37671 * 120.02286 * 179.97438 * 9 8 7 11 11 C 1.39708 * 119.97725 * 0.02562 * 10 9 8 12 12 C 1.47714 * 120.02550 * 179.97438 * 11 10 9 13 13 O 1.21566 * 120.00116 * 0.02562 * 12 11 10 14 14 N 1.34782 * 120.00043 * 180.02562 * 12 11 10 15 15 C 1.46499 * 120.00074 * 179.97438 * 14 12 11 16 16 H 1.09001 * 109.46813 * 35.00305 * 15 14 12 17 17 C 1.53000 * 109.46840 * 155.00031 * 15 14 12 18 18 C 1.52997 * 109.47060 * 180.02562 * 17 15 14 19 19 C 1.53006 * 109.47127 * 300.00449 * 18 17 15 20 20 H 1.09001 * 109.47002 * 299.99574 * 19 18 17 21 21 O 1.42900 * 109.46976 * 179.97438 * 19 18 17 22 22 C 1.52997 * 109.47164 * 59.99836 * 19 18 17 23 23 C 1.52996 * 109.47185 * 275.00149 * 15 14 12 24 24 C 1.39713 * 119.94576 * 0.25328 * 11 10 9 25 25 C 1.37664 * 119.98040 * 359.46727 * 24 11 10 26 26 C 1.39402 * 119.74813 * 0.27266 * 7 6 5 27 27 C 1.37997 * 119.86906 * 359.43049 * 26 7 6 28 28 H 0.96697 * 113.99918 * 299.99679 * 1 2 3 29 29 H 1.08996 * 109.47302 * 240.00372 * 2 1 3 30 30 H 1.48498 * 109.99876 * 178.68073 * 3 2 1 31 31 H 1.48502 * 110.00084 * 299.99843 * 3 2 1 32 32 H 1.07999 * 119.93225 * 359.97438 * 5 4 2 33 33 H 1.08002 * 120.06163 * 180.02562 * 6 5 4 34 34 H 1.08002 * 119.99217 * 359.97438 * 9 8 7 35 35 H 1.07998 * 120.01261 * 179.97438 * 10 9 8 36 36 H 0.97002 * 119.99499 * 0.02562 * 14 12 11 37 37 H 1.09002 * 109.47398 * 300.00326 * 17 15 14 38 38 H 1.09001 * 109.47194 * 60.00507 * 17 15 14 39 39 H 1.08998 * 109.47533 * 59.99948 * 18 17 15 40 40 H 1.08996 * 109.47853 * 180.02562 * 18 17 15 41 41 H 0.96708 * 114.00004 * 59.99909 * 21 19 18 42 42 H 1.09002 * 109.47045 * 180.02562 * 22 19 18 43 43 H 1.09001 * 109.47375 * 59.99966 * 22 19 18 44 44 H 1.08992 * 109.47554 * 299.99819 * 23 15 14 45 45 H 1.09004 * 109.47108 * 60.00069 * 23 15 14 46 46 H 1.08010 * 120.00671 * 179.71788 * 24 11 10 47 47 H 1.07993 * 119.98984 * 180.27713 * 25 24 11 48 48 H 1.08003 * 120.06153 * 179.72151 * 26 7 6 49 49 H 1.08000 * 119.93917 * 180.27238 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6832 -2.0611 1.3958 6 6 2.1412 -2.7170 2.5203 7 6 2.8556 -2.0157 3.4903 8 6 3.3508 -2.7150 4.7005 9 6 4.0659 -2.0102 5.6690 10 6 4.5258 -2.6583 6.7932 11 6 4.2765 -4.0224 6.9637 12 6 4.7698 -4.7189 8.1693 13 8 5.3926 -4.1051 9.0138 14 7 4.5294 -6.0350 8.3330 15 6 5.0192 -6.7259 9.5284 16 1 4.9732 -6.0506 10.3828 17 6 4.1476 -7.9535 9.8009 18 6 4.6587 -8.6747 11.0496 19 6 6.1065 -9.1165 10.8268 20 1 6.1529 -9.7919 9.9726 21 8 6.5840 -9.7896 11.9934 22 6 6.9781 -7.8889 10.5543 23 6 6.4669 -7.1677 9.3049 24 6 3.5652 -4.7283 5.9902 25 6 3.1013 -4.0771 4.8696 26 6 3.0982 -0.6535 3.3208 27 6 2.6407 -0.0095 2.1893 28 1 -0.3933 0.4416 0.7651 29 1 1.7924 -0.5138 -0.8900 30 1 3.5345 1.7704 0.0321 31 1 1.5614 2.4679 -1.2085 32 1 1.1299 -2.6034 0.6433 33 1 1.9471 -3.7718 2.6481 34 1 4.2590 -0.9559 5.5369 35 1 5.0797 -2.1127 7.5427 36 1 4.0328 -6.5248 7.6589 37 1 3.1162 -7.6387 9.9600 38 1 4.1937 -8.6287 8.9465 39 1 4.6123 -7.9994 11.9039 40 1 4.0381 -9.5495 11.2437 41 1 6.0774 -10.5796 12.2268 42 1 8.0094 -8.2036 10.3951 43 1 6.9317 -7.2134 11.4085 44 1 6.5130 -7.8429 8.4506 45 1 7.0878 -6.2931 9.1107 46 1 3.3758 -5.7839 6.1189 47 1 2.5477 -4.6217 4.1192 48 1 3.6473 -0.1043 4.0713 49 1 2.8318 1.0449 2.0548 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13158362.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:06 Heat of formation + Delta-G solvation = -72.809103 kcal Electronic energy + Delta-G solvation = -29606.542423 eV Core-core repulsion = 25464.068380 eV Total energy + Delta-G solvation = -4142.474043 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.55988 -40.89842 -39.94415 -39.05779 -37.57880 -36.97468 -34.70573 -33.92701 -32.67041 -31.96432 -31.67925 -31.05764 -29.27707 -26.96928 -24.75512 -24.67687 -23.95082 -23.20441 -22.65219 -22.13007 -21.36371 -20.99829 -19.29769 -18.49301 -18.25998 -17.80084 -17.49295 -16.94705 -16.50796 -16.38136 -16.08762 -15.95856 -15.68682 -15.54761 -15.48555 -15.11929 -15.00535 -14.95728 -14.79670 -14.35283 -14.29676 -14.15909 -14.09752 -13.64430 -13.58012 -13.37159 -13.19744 -12.85570 -12.77854 -12.60747 -12.50029 -12.21968 -12.05683 -12.03154 -11.92578 -11.69139 -11.30761 -10.93627 -10.85603 -10.79683 -10.46889 -10.13610 -10.11034 -10.05761 -9.13664 -5.08767 -0.72965 0.26756 0.30538 0.46829 1.23291 1.58614 1.84117 1.92985 2.02671 2.56890 2.95541 3.17120 3.31919 3.42200 3.47595 3.52058 3.57276 3.61981 3.73121 3.77078 3.87861 3.92615 3.95989 4.03206 4.10133 4.16084 4.19049 4.26010 4.28121 4.29535 4.34024 4.41982 4.53301 4.56816 4.60544 4.75945 4.77089 4.82780 4.87324 4.91076 4.95970 5.00399 5.06159 5.10418 5.11943 5.17115 5.22505 5.27303 5.33861 5.40359 5.44100 5.56890 5.72840 5.82635 6.42562 6.50262 6.66021 7.17881 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.686 3.314 4 C -0.114 4.114 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.118 4.118 10 C -0.054 4.054 11 C -0.137 4.137 12 C 0.560 3.440 13 O -0.532 6.532 14 N -0.724 5.724 15 C 0.143 3.857 16 H 0.093 0.907 17 C -0.124 4.124 18 C -0.149 4.149 19 C 0.103 3.897 20 H 0.056 0.944 21 O -0.567 6.567 22 C -0.111 4.111 23 C -0.127 4.127 24 C -0.082 4.082 25 C -0.118 4.118 26 C -0.100 4.100 27 C -0.113 4.113 28 H 0.379 0.621 29 H 0.114 0.886 30 H -0.257 1.257 31 H -0.254 1.254 32 H 0.129 0.871 33 H 0.129 0.871 34 H 0.135 0.865 35 H 0.140 0.860 36 H 0.399 0.601 37 H 0.075 0.925 38 H 0.071 0.929 39 H 0.076 0.924 40 H 0.072 0.928 41 H 0.379 0.621 42 H 0.074 0.926 43 H 0.074 0.926 44 H 0.067 0.933 45 H 0.076 0.924 46 H 0.128 0.872 47 H 0.133 0.867 48 H 0.132 0.868 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.426 -1.878 -0.934 4.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.180 4.180 3 Si 0.587 3.413 4 C -0.114 4.114 5 C -0.108 4.108 6 C -0.123 4.123 7 C -0.049 4.049 8 C -0.018 4.018 9 C -0.136 4.136 10 C -0.073 4.073 11 C -0.140 4.140 12 C 0.348 3.652 13 O -0.409 6.409 14 N -0.376 5.376 15 C 0.039 3.961 16 H 0.111 0.889 17 C -0.162 4.162 18 C -0.187 4.187 19 C 0.044 3.956 20 H 0.074 0.926 21 O -0.373 6.373 22 C -0.149 4.149 23 C -0.165 4.165 24 C -0.101 4.101 25 C -0.136 4.136 26 C -0.118 4.118 27 C -0.131 4.131 28 H 0.227 0.773 29 H 0.131 0.869 30 H -0.182 1.182 31 H -0.179 1.179 32 H 0.147 0.853 33 H 0.147 0.853 34 H 0.153 0.847 35 H 0.158 0.842 36 H 0.235 0.765 37 H 0.093 0.907 38 H 0.089 0.911 39 H 0.094 0.906 40 H 0.090 0.910 41 H 0.226 0.774 42 H 0.093 0.907 43 H 0.092 0.908 44 H 0.086 0.914 45 H 0.095 0.905 46 H 0.146 0.854 47 H 0.151 0.849 48 H 0.150 0.850 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.965 -0.664 -1.308 2.452 hybrid contribution -0.610 -1.424 -0.563 1.649 sum -2.575 -2.089 -1.871 3.807 Atomic orbital electron populations 1.86514 1.16974 1.81705 1.49264 1.25076 0.85332 1.10164 0.97462 0.94760 0.81132 0.78006 0.87353 1.20456 0.99160 0.95049 0.96771 1.20973 0.98603 0.93734 0.97538 1.21315 0.97323 1.00116 0.93506 1.18819 0.98773 0.93488 0.93834 1.18991 0.96216 0.93316 0.93241 1.21252 0.98328 1.00504 0.93488 1.21235 0.96176 0.92944 0.96902 1.19982 1.03127 0.95102 0.95746 1.18276 0.79297 0.81715 0.85962 1.90804 1.40203 1.66141 1.43752 1.45983 1.58028 1.09386 1.24174 1.21068 0.93190 0.93647 0.88213 0.88904 1.21750 0.99628 0.96201 0.98670 1.22222 0.96814 1.01234 0.98427 1.21859 0.92399 0.93781 0.87561 0.92608 1.86543 1.59379 1.44651 1.46710 1.21440 0.99560 0.95691 0.98219 1.21897 0.95968 1.00811 0.97856 1.21196 0.96088 0.99552 0.93227 1.21158 1.00653 0.93747 0.98066 1.21230 0.99370 0.93605 0.97597 1.20944 0.98651 0.99365 0.94099 0.77317 0.86861 1.18201 1.17884 0.85310 0.85304 0.84732 0.84212 0.76523 0.90681 0.91077 0.90559 0.90973 0.77391 0.90713 0.90754 0.91446 0.90517 0.85441 0.84929 0.85000 0.85252 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.09 12.83 -35.23 -0.45 -0.36 16 2 C -0.07 0.05 2.80 36.00 0.10 0.15 16 3 Si 0.69 -0.94 29.79 -169.99 -5.06 -6.01 16 4 C -0.11 0.05 5.36 -104.55 -0.56 -0.51 16 5 C -0.09 0.02 9.67 -39.63 -0.38 -0.36 16 6 C -0.10 0.06 9.43 -39.24 -0.37 -0.31 16 7 C -0.05 0.01 5.88 -104.90 -0.62 -0.61 16 8 C -0.02 0.00 5.88 -104.82 -0.62 -0.61 16 9 C -0.12 0.02 9.41 -39.32 -0.37 -0.35 16 10 C -0.05 -0.05 9.58 -39.24 -0.38 -0.43 16 11 C -0.14 -0.12 5.88 -104.93 -0.62 -0.74 16 12 C 0.56 1.26 7.73 -12.39 -0.10 1.16 16 13 O -0.53 -3.18 16.00 5.31 0.08 -3.09 16 14 N -0.72 0.48 5.03 -54.79 -0.28 0.21 16 15 C 0.14 -0.06 2.45 -67.93 -0.17 -0.22 16 16 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 17 C -0.12 0.30 5.39 -26.73 -0.14 0.16 16 18 C -0.15 0.28 5.55 -26.73 -0.15 0.13 16 19 C 0.10 -0.06 3.47 -26.73 -0.09 -0.16 16 20 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 21 O -0.57 -0.43 13.32 -35.23 -0.47 -0.90 16 22 C -0.11 -0.04 5.57 -26.71 -0.15 -0.19 16 23 C -0.13 0.01 5.50 -26.71 -0.15 -0.14 16 24 C -0.08 0.10 9.52 -39.24 -0.37 -0.27 16 25 C -0.12 0.13 9.41 -39.32 -0.37 -0.24 16 26 C -0.10 0.08 9.43 -39.24 -0.37 -0.29 16 27 C -0.11 0.12 8.65 -39.63 -0.34 -0.22 16 28 H 0.38 -1.51 8.70 45.56 0.40 -1.11 16 29 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 30 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 31 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 32 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 33 H 0.13 -0.31 6.19 -52.49 -0.33 -0.63 16 34 H 0.13 -0.29 6.19 -52.49 -0.32 -0.61 16 35 H 0.14 0.16 7.64 -52.49 -0.40 -0.24 16 36 H 0.40 -1.34 6.62 -40.82 -0.27 -1.61 16 37 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 41 H 0.38 -1.24 9.08 45.56 0.41 -0.83 16 42 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 43 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 44 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 45 H 0.08 0.14 8.14 -51.93 -0.42 -0.29 16 46 H 0.13 -0.52 6.39 -52.48 -0.34 -0.86 16 47 H 0.13 -0.40 6.19 -52.49 -0.32 -0.73 16 48 H 0.13 -0.35 6.19 -52.48 -0.33 -0.68 16 49 H 0.13 -0.39 4.89 -52.49 -0.26 -0.65 16 LS Contribution 392.67 15.07 5.92 5.92 Total: 0.00 -9.31 392.67 -12.45 -21.76 By element: Atomic # 1 Polarization: -7.49 SS G_CDS: -5.98 Total: -13.47 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -6.21 Total: -4.06 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -0.28 Total: 0.21 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.84 Total: -4.35 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.06 Total: -6.01 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -9.31 -12.45 -21.76 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13158362.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.049 kcal (2) G-P(sol) polarization free energy of solvation -9.311 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.450 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.760 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds