Wall clock time and date at job start Sat Mar 6 2021 15:00:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86308 * 109.47341 * 2 1 4 4 C 1.50705 * 109.46918 * 119.99772 * 2 1 3 5 5 C 1.34703 * 125.66646 * 64.99746 * 4 2 1 6 6 C 1.40970 * 107.02930 * 179.97438 * 5 4 2 7 7 C 1.35930 * 106.74021 * 0.02562 * 6 5 4 8 8 C 1.47821 * 125.92439 * 179.97438 * 7 6 5 9 9 C 1.39796 * 120.00346 * 0.02562 * 8 7 6 10 10 C 1.37810 * 120.24871 * 180.02562 * 9 8 7 11 11 C 1.38784 * 120.24060 * 359.97438 * 10 9 8 12 12 O 1.35651 * 119.99918 * 179.97438 * 11 10 9 13 13 C 1.40245 * 119.99428 * 0.02562 * 11 10 9 14 14 C 1.47566 * 120.11668 * 180.02562 * 13 11 10 15 15 O 1.21588 * 120.00388 * 359.97438 * 14 13 11 16 16 N 1.34779 * 119.99849 * 180.02562 * 14 13 11 17 17 C 1.46506 * 120.00145 * 180.02562 * 16 14 13 18 18 H 1.08993 * 109.47326 * 34.98906 * 17 16 14 19 19 C 1.52995 * 109.47201 * 154.99454 * 17 16 14 20 20 C 1.52996 * 109.47038 * 179.97438 * 19 17 16 21 21 C 1.52996 * 109.47665 * 300.00391 * 20 19 17 22 22 H 1.08999 * 109.46954 * 299.99779 * 21 20 19 23 23 O 1.42896 * 109.47378 * 179.97438 * 21 20 19 24 24 C 1.52998 * 109.47037 * 59.99389 * 21 20 19 25 25 C 1.52996 * 109.47547 * 300.00416 * 24 21 20 26 26 C 1.39215 * 119.99691 * 179.97438 * 8 7 6 27 27 O 1.34352 * 125.66321 * 245.30786 * 4 2 1 28 28 H 0.96702 * 114.00015 * 60.00210 * 1 2 3 29 29 H 1.09000 * 109.47314 * 239.99811 * 2 1 3 30 30 H 1.48497 * 109.99851 * 59.99467 * 3 2 1 31 31 H 1.48498 * 109.99974 * 181.31637 * 3 2 1 32 32 H 1.07999 * 126.47999 * 0.04395 * 5 4 2 33 33 H 1.08002 * 126.62517 * 179.97438 * 6 5 4 34 34 H 1.08009 * 119.87952 * 359.97438 * 9 8 7 35 35 H 1.07998 * 119.88201 * 179.97438 * 10 9 8 36 36 H 0.96700 * 113.99544 * 90.00140 * 12 11 10 37 37 H 0.97002 * 119.99912 * 359.97438 * 16 14 13 38 38 H 1.08998 * 109.47183 * 299.99651 * 19 17 16 39 39 H 1.08999 * 109.47110 * 59.99837 * 19 17 16 40 40 H 1.09010 * 109.47102 * 59.99968 * 20 19 17 41 41 H 1.09004 * 109.47434 * 179.97438 * 20 19 17 42 42 H 0.96705 * 114.00373 * 179.97438 * 23 21 20 43 43 H 1.09006 * 109.47268 * 60.00403 * 24 21 20 44 44 H 1.09002 * 109.47227 * 179.97438 * 24 21 20 45 45 H 1.08999 * 109.46972 * 299.99933 * 25 24 21 46 46 H 1.09001 * 109.47093 * 180.02562 * 25 24 21 47 47 H 1.07997 * 120.12125 * 359.74080 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.7569 -2.0166 1.5095 6 6 2.3822 -2.2611 2.7491 7 6 2.9083 -1.0778 3.1623 8 6 3.6587 -0.8529 4.4159 9 6 3.8805 -1.9146 5.2979 10 6 4.5789 -1.7105 6.4683 11 6 5.0676 -0.4495 6.7797 12 8 5.7540 -0.2540 7.9333 13 6 4.8510 0.6228 5.9022 14 6 5.3700 1.9646 6.2304 15 8 5.9863 2.1423 7.2634 16 7 5.1599 2.9936 5.3856 17 6 5.6756 4.3257 5.7111 18 1 6.6293 4.2293 6.2299 19 6 5.8749 5.1246 4.4216 20 6 6.4128 6.5159 4.7617 21 6 5.4130 7.2432 5.6629 22 1 4.4593 7.3393 5.1440 23 8 5.9158 8.5424 5.9809 24 6 5.2137 6.4442 6.9523 25 6 4.6757 5.0529 6.6124 26 6 4.1453 0.4160 4.7177 27 8 2.6222 -0.1447 2.2343 28 1 -0.3933 0.4417 -0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 1.5614 2.4679 1.2084 31 1 3.5346 1.7703 -0.0321 32 1 1.2375 -2.7400 0.8984 33 1 2.4326 -3.2058 3.2701 34 1 3.5024 -2.8984 5.0616 35 1 4.7465 -2.5349 7.1456 36 1 6.7082 -0.3870 7.8505 37 1 4.6679 2.8520 4.5617 38 1 6.5870 4.6063 3.7795 39 1 4.9211 5.2210 3.9029 40 1 7.3666 6.4198 5.2807 41 1 6.5553 7.0850 3.8429 42 1 5.3318 9.0616 6.5505 43 1 6.1675 6.3481 7.4713 44 1 4.5017 6.9626 7.5946 45 1 3.7219 5.1490 6.0935 46 1 4.5333 4.4839 7.5311 47 1 3.9794 1.2365 4.0353 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13259648.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:19 Heat of formation + Delta-G solvation = -114.992837 kcal Electronic energy + Delta-G solvation = -32106.260637 eV Core-core repulsion = 27608.356745 eV Total energy + Delta-G solvation = -4497.903892 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -43.76158 -41.65639 -40.42087 -39.19277 -38.11795 -37.82351 -36.91098 -34.64895 -34.21183 -32.88012 -32.48270 -31.95103 -30.20171 -29.29082 -26.40810 -25.41659 -23.95052 -23.77388 -23.27071 -22.62059 -21.58630 -21.38381 -20.94134 -19.65342 -19.00138 -18.78269 -18.24577 -17.80416 -17.59419 -17.09542 -16.72295 -16.60666 -16.29221 -16.14180 -15.89200 -15.68589 -15.54577 -15.43095 -14.79093 -14.67009 -14.54851 -14.41544 -14.21431 -14.14309 -13.94431 -13.59415 -13.41793 -13.33815 -13.22104 -13.15366 -13.03083 -12.74430 -12.47640 -12.25027 -12.15736 -11.88912 -11.78667 -11.35735 -11.10657 -10.87476 -10.73652 -10.66351 -10.45103 -10.35608 -10.06915 -8.95538 -5.19668 -0.60940 -0.27403 0.70275 1.03983 1.37401 1.53077 1.57333 1.90001 1.90769 1.99560 2.59261 3.03587 3.12045 3.14297 3.38206 3.46341 3.55808 3.58084 3.63725 3.73507 3.91942 3.92640 3.94655 4.05379 4.08492 4.12125 4.18340 4.20664 4.31053 4.33391 4.37377 4.53340 4.57096 4.58403 4.71310 4.75949 4.77930 4.88414 4.94917 4.95511 5.02297 5.04869 5.06244 5.10266 5.19082 5.26859 5.35864 5.39693 5.44066 5.94502 6.38765 6.40099 6.63118 6.66622 7.17638 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.035 4.035 3 Si 0.705 3.295 4 C -0.009 4.009 5 C -0.164 4.164 6 C -0.186 4.186 7 C 0.034 3.966 8 C -0.034 4.034 9 C -0.052 4.052 10 C -0.148 4.148 11 C 0.180 3.820 12 O -0.475 6.475 13 C -0.164 4.164 14 C 0.561 3.439 15 O -0.514 6.514 16 N -0.727 5.727 17 C 0.145 3.855 18 H 0.094 0.906 19 C -0.125 4.125 20 C -0.109 4.109 21 C 0.103 3.897 22 H 0.056 0.944 23 O -0.568 6.568 24 C -0.149 4.149 25 C -0.128 4.128 26 C -0.055 4.055 27 O -0.173 6.173 28 H 0.390 0.610 29 H 0.095 0.905 30 H -0.249 1.249 31 H -0.252 1.252 32 H 0.157 0.843 33 H 0.157 0.843 34 H 0.141 0.859 35 H 0.147 0.853 36 H 0.400 0.600 37 H 0.398 0.602 38 H 0.078 0.922 39 H 0.071 0.929 40 H 0.075 0.925 41 H 0.077 0.923 42 H 0.380 0.620 43 H 0.075 0.925 44 H 0.069 0.931 45 H 0.065 0.935 46 H 0.074 0.926 47 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.044 -1.035 -6.762 7.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.145 4.145 3 Si 0.604 3.396 4 C -0.058 4.058 5 C -0.183 4.183 6 C -0.205 4.205 7 C -0.016 4.016 8 C -0.034 4.034 9 C -0.070 4.070 10 C -0.166 4.166 11 C 0.133 3.867 12 O -0.286 6.286 13 C -0.168 4.168 14 C 0.348 3.652 15 O -0.390 6.390 16 N -0.379 5.379 17 C 0.041 3.959 18 H 0.112 0.888 19 C -0.163 4.163 20 C -0.147 4.147 21 C 0.044 3.956 22 H 0.074 0.926 23 O -0.373 6.373 24 C -0.187 4.187 25 C -0.167 4.167 26 C -0.074 4.074 27 O -0.071 6.071 28 H 0.239 0.761 29 H 0.113 0.887 30 H -0.173 1.173 31 H -0.176 1.176 32 H 0.174 0.826 33 H 0.175 0.825 34 H 0.159 0.841 35 H 0.165 0.835 36 H 0.259 0.741 37 H 0.233 0.767 38 H 0.096 0.904 39 H 0.089 0.911 40 H 0.094 0.906 41 H 0.096 0.904 42 H 0.227 0.773 43 H 0.094 0.906 44 H 0.088 0.912 45 H 0.084 0.916 46 H 0.092 0.908 47 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -0.966 -0.391 -5.143 5.248 hybrid contribution -0.499 -0.851 -0.106 0.993 sum -1.465 -1.242 -5.249 5.589 Atomic orbital electron populations 1.86472 1.16363 1.81993 1.50217 1.23786 0.86166 1.11630 0.92878 0.95229 0.80963 0.76377 0.87046 1.21375 1.00891 0.92615 0.90947 1.21545 1.03230 0.95664 0.97855 1.21863 1.02604 0.98441 0.97580 1.20299 1.03267 0.87476 0.90535 1.17582 1.00226 0.94183 0.91416 1.21126 0.95326 0.98437 0.92138 1.21406 1.00828 0.96829 0.97536 1.18591 0.93109 0.90553 0.84415 1.84753 1.23957 1.92173 1.27746 1.20291 1.05322 0.94865 0.96274 1.17975 0.79807 0.83775 0.83616 1.90837 1.39855 1.84210 1.24101 1.46020 1.58365 1.09056 1.24445 1.21059 0.98313 0.80639 0.95917 0.88835 1.21781 1.02395 0.95423 0.96719 1.21393 0.99073 0.94096 1.00125 1.21844 0.96505 0.82742 0.94517 0.92625 1.86514 1.50730 1.27571 1.72524 1.22232 1.02541 0.95756 0.98205 1.21871 0.98654 0.95561 1.00575 1.21270 0.94598 0.96528 0.95005 1.83935 1.58559 1.38014 1.26608 0.76056 0.88704 1.17278 1.17615 0.82568 0.82523 0.84106 0.83519 0.74133 0.76727 0.90371 0.91076 0.90647 0.90446 0.77272 0.90636 0.91196 0.91593 0.90772 0.85058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.48 12.86 -35.23 -0.45 0.03 16 2 C -0.03 0.03 2.97 36.01 0.11 0.14 16 3 Si 0.70 -1.25 32.11 -169.99 -5.46 -6.71 16 4 C -0.01 -0.02 6.24 -35.56 -0.22 -0.24 16 5 C -0.16 -0.28 10.78 -39.80 -0.43 -0.71 16 6 C -0.19 -0.23 10.26 -39.38 -0.40 -0.64 16 7 C 0.03 0.08 7.03 -36.49 -0.26 -0.18 16 8 C -0.03 -0.04 5.87 -105.03 -0.62 -0.66 16 9 C -0.05 0.02 9.54 -39.16 -0.37 -0.36 16 10 C -0.15 0.01 9.96 -39.54 -0.39 -0.38 16 11 C 0.18 0.35 6.72 -38.63 -0.26 0.09 16 12 O -0.47 -1.19 11.55 -40.60 -0.47 -1.66 16 13 C -0.16 -0.37 5.88 -104.90 -0.62 -0.99 16 14 C 0.56 1.89 7.73 -12.45 -0.10 1.79 16 15 O -0.51 -3.31 14.81 -16.66 -0.25 -3.56 16 16 N -0.73 -0.60 5.03 -54.84 -0.28 -0.88 16 17 C 0.14 0.09 2.45 -67.93 -0.17 -0.08 16 18 H 0.09 0.22 7.58 -51.93 -0.39 -0.18 16 19 C -0.13 0.14 5.39 -26.74 -0.14 0.00 16 20 C -0.11 0.02 5.57 -26.74 -0.15 -0.13 16 21 C 0.10 0.00 3.47 -26.73 -0.09 -0.09 16 22 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 23 O -0.57 -0.65 13.32 -35.23 -0.47 -1.12 16 24 C -0.15 0.00 5.54 -26.73 -0.15 -0.15 16 25 C -0.13 -0.09 5.49 -26.73 -0.15 -0.23 16 26 C -0.06 -0.07 9.20 -38.78 -0.36 -0.43 16 27 O -0.17 -0.56 8.80 4.56 0.04 -0.52 16 28 H 0.39 -2.49 8.74 45.56 0.40 -2.09 16 29 H 0.10 -0.32 7.96 -51.93 -0.41 -0.73 16 30 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 31 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 32 H 0.16 -0.01 8.06 -52.49 -0.42 -0.43 16 33 H 0.16 -0.21 7.24 -52.49 -0.38 -0.59 16 34 H 0.14 -0.38 6.96 -52.48 -0.37 -0.75 16 35 H 0.15 -0.30 8.06 -52.49 -0.42 -0.73 16 36 H 0.40 -0.52 9.06 45.56 0.41 -0.11 16 37 H 0.40 -0.43 6.63 -40.82 -0.27 -0.70 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 40 H 0.07 0.05 8.14 -51.92 -0.42 -0.38 16 41 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 42 H 0.38 -1.00 9.08 45.56 0.41 -0.59 16 43 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 44 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 45 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 46 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 47 H 0.13 -0.01 6.24 -52.49 -0.33 -0.33 16 LS Contribution 391.66 15.07 5.90 5.90 Total: 0.00 -11.70 391.66 -10.97 -22.67 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -4.77 Total: -10.92 kcal Atomic # 6 Polarization: 1.52 SS G_CDS: -4.76 Total: -3.24 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.28 Total: -0.88 kcal Atomic # 8 Polarization: -5.24 SS G_CDS: -1.60 Total: -6.83 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.46 Total: -6.71 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -11.70 -10.97 -22.67 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13259648.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.323 kcal (2) G-P(sol) polarization free energy of solvation -11.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.026 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.670 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds