Wall clock time and date at job start Sat Mar 6 2021 15:00:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86307 * 109.47091 * 2 1 4 4 C 1.50695 * 109.47645 * 119.99554 * 2 1 3 5 5 C 1.38591 * 120.31889 * 65.00368 * 4 2 1 6 6 C 1.38633 * 118.48737 * 180.02562 * 5 4 2 7 7 C 1.39268 * 119.06016 * 359.97438 * 6 5 4 8 8 C 1.48168 * 119.72158 * 179.97438 * 7 6 5 9 9 O 1.21515 * 120.00005 * 0.02562 * 8 7 6 10 10 N 1.34780 * 120.00070 * 180.02562 * 8 7 6 11 11 C 1.46492 * 119.99930 * 180.02562 * 10 8 7 12 12 H 1.09002 * 109.47696 * 34.99761 * 11 10 8 13 13 C 1.53002 * 109.47204 * 155.00105 * 11 10 8 14 14 C 1.53000 * 109.47233 * 180.02562 * 13 11 10 15 15 C 1.52997 * 109.47060 * 299.99657 * 14 13 11 16 16 H 1.09002 * 109.47153 * 300.00319 * 15 14 13 17 17 O 1.42895 * 109.47503 * 180.02562 * 15 14 13 18 18 C 1.52999 * 109.47317 * 59.99960 * 15 14 13 19 19 C 1.52997 * 109.47244 * 274.99857 * 11 10 8 20 20 N 1.32746 * 120.55652 * 0.27658 * 7 6 5 21 21 C 1.31500 * 121.63966 * 359.43572 * 20 7 6 22 22 H 0.96700 * 114.00607 * 59.99563 * 1 2 3 23 23 H 1.09001 * 109.47227 * 240.00216 * 2 1 3 24 24 H 1.48509 * 109.99802 * 298.68513 * 3 2 1 25 25 H 1.48500 * 110.00107 * 59.99545 * 3 2 1 26 26 H 1.08000 * 120.75442 * 359.97438 * 5 4 2 27 27 H 1.08000 * 120.46489 * 180.02562 * 6 5 4 28 28 H 0.96998 * 119.99716 * 359.97438 * 10 8 7 29 29 H 1.08992 * 109.47063 * 59.99836 * 13 11 10 30 30 H 1.09004 * 109.46733 * 299.99549 * 13 11 10 31 31 H 1.09002 * 109.47398 * 59.99826 * 14 13 11 32 32 H 1.09001 * 109.47194 * 180.02562 * 14 13 11 33 33 H 0.96698 * 114.00355 * 180.02562 * 17 15 14 34 34 H 1.09000 * 109.47486 * 180.02562 * 18 15 14 35 35 H 1.09002 * 109.46716 * 60.00091 * 18 15 14 36 36 H 1.09002 * 109.47153 * 300.00242 * 19 11 10 37 37 H 1.09001 * 109.47289 * 60.00326 * 19 11 10 38 38 H 1.08000 * 119.54694 * 180.31548 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.6880 -2.0634 1.4056 6 6 2.1672 -2.6784 2.5519 7 6 2.8730 -1.9195 3.4822 8 6 3.3913 -2.5618 4.7127 9 8 3.2002 -3.7461 4.9066 10 7 4.0746 -1.8326 5.6170 11 6 4.5875 -2.4678 6.8334 12 1 4.8958 -3.4887 6.6079 13 6 5.7882 -1.6758 7.3549 14 6 6.3243 -2.3396 8.6249 15 6 5.2267 -2.3625 9.6906 16 1 4.9183 -1.3417 9.9165 17 8 5.7274 -2.9819 10.8770 18 6 4.0259 -3.1543 9.1692 19 6 3.4897 -2.4901 7.8988 20 7 3.0802 -0.6242 3.2786 21 6 2.6417 -0.0170 2.1978 22 1 -0.3934 0.4417 -0.7650 23 1 1.7923 -0.5138 -0.8900 24 1 1.5877 2.4586 -1.2243 25 1 1.5614 2.4680 1.2084 26 1 1.1369 -2.6256 0.6663 27 1 1.9963 -3.7314 2.7206 28 1 4.2275 -0.8873 5.4620 29 1 5.4799 -0.6550 7.5804 30 1 6.5704 -1.6600 6.5959 31 1 6.6327 -3.3604 8.3990 32 1 7.1794 -1.7751 8.9968 33 1 5.0835 -3.0313 11.5967 34 1 3.2438 -3.1703 9.9282 35 1 4.3343 -4.1751 8.9432 36 1 3.1814 -1.4692 8.1243 37 1 2.6342 -3.0543 7.5273 38 1 2.8338 1.0374 2.0641 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13287726.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:27 Heat of formation + Delta-G solvation = -84.617956 kcal Electronic energy + Delta-G solvation = -21448.562203 eV Core-core repulsion = 18064.129979 eV Total energy + Delta-G solvation = -3384.432225 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.130 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.85677 -40.69655 -39.41426 -38.05561 -36.96222 -34.65329 -33.71542 -32.99366 -31.90520 -29.65987 -27.59900 -25.02107 -24.13702 -23.89062 -22.85686 -21.55783 -21.11535 -19.18562 -18.78582 -18.20371 -18.17540 -17.22207 -16.84969 -16.49315 -16.17532 -15.85572 -15.60116 -15.51408 -15.09944 -14.93431 -14.48938 -14.32925 -14.14114 -14.03786 -14.00172 -13.35985 -13.26742 -13.00864 -12.60629 -12.45057 -12.20583 -12.14388 -11.77023 -11.33611 -11.27714 -11.06567 -10.83248 -10.75412 -10.56626 -10.29725 -10.01039 -5.13733 -0.54551 0.08582 1.05480 1.42844 1.65315 1.79024 2.00474 2.67104 2.92710 3.14125 3.20489 3.53014 3.56887 3.66718 3.69234 3.73718 3.87842 3.99120 4.10413 4.16839 4.18572 4.21425 4.26454 4.37421 4.40854 4.54606 4.62921 4.81401 4.84115 4.95045 4.97774 5.00693 5.06204 5.09570 5.22026 5.31077 5.36827 5.48989 6.22222 6.35814 6.65658 6.69870 7.17148 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.076 4.076 3 Si 0.683 3.317 4 C -0.103 4.103 5 C -0.053 4.053 6 C -0.108 4.108 7 C 0.079 3.921 8 C 0.574 3.426 9 O -0.528 6.528 10 N -0.707 5.707 11 C 0.141 3.859 12 H 0.093 0.907 13 C -0.124 4.124 14 C -0.109 4.109 15 C 0.102 3.898 16 H 0.056 0.944 17 O -0.568 6.568 18 C -0.149 4.149 19 C -0.128 4.128 20 N -0.452 5.452 21 C 0.106 3.894 22 H 0.384 0.616 23 H 0.084 0.916 24 H -0.255 1.255 25 H -0.250 1.250 26 H 0.146 0.854 27 H 0.153 0.847 28 H 0.412 0.588 29 H 0.073 0.927 30 H 0.079 0.921 31 H 0.074 0.926 32 H 0.077 0.923 33 H 0.379 0.621 34 H 0.069 0.931 35 H 0.075 0.925 36 H 0.067 0.933 37 H 0.072 0.928 38 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.930 3.490 -2.939 4.656 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.186 4.186 3 Si 0.584 3.416 4 C -0.105 4.105 5 C -0.078 4.078 6 C -0.128 4.128 7 C -0.059 4.059 8 C 0.359 3.641 9 O -0.404 6.404 10 N -0.358 5.358 11 C 0.037 3.963 12 H 0.111 0.889 13 C -0.162 4.162 14 C -0.147 4.147 15 C 0.044 3.956 16 H 0.074 0.926 17 O -0.374 6.374 18 C -0.188 4.188 19 C -0.166 4.166 20 N -0.163 5.163 21 C -0.054 4.054 22 H 0.233 0.767 23 H 0.102 0.898 24 H -0.180 1.180 25 H -0.174 1.174 26 H 0.164 0.836 27 H 0.171 0.829 28 H 0.248 0.752 29 H 0.091 0.909 30 H 0.098 0.902 31 H 0.093 0.907 32 H 0.096 0.904 33 H 0.227 0.773 34 H 0.088 0.912 35 H 0.093 0.907 36 H 0.086 0.914 37 H 0.091 0.909 38 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 1.694 3.559 -1.937 4.392 hybrid contribution -2.202 -0.080 -1.023 2.429 sum -0.508 3.479 -2.960 4.596 Atomic orbital electron populations 1.86580 1.17272 1.80294 1.50094 1.24728 0.84908 1.11360 0.97590 0.95057 0.91407 0.74166 0.81012 1.20522 0.98567 0.94946 0.96450 1.21539 0.95647 0.93822 0.96839 1.22207 0.95324 1.02328 0.92983 1.21165 0.98638 0.90274 0.95796 1.17849 0.78201 0.85934 0.82150 1.90817 1.57615 1.14837 1.77110 1.45890 1.55418 1.14006 1.20495 1.21114 0.93323 0.98410 0.83428 0.88888 1.21766 0.97213 0.99659 0.97525 1.21404 0.97846 1.02428 0.93066 1.21856 0.93312 0.95108 0.85365 0.92585 1.86515 1.43348 1.83065 1.24457 1.22244 0.98076 1.00864 0.97569 1.21882 0.98629 1.01582 0.94549 1.67538 1.18388 1.09437 1.20967 1.22604 0.94468 0.99869 0.88461 0.76705 0.89830 1.18009 1.17416 0.83600 0.82944 0.75204 0.90850 0.90240 0.90691 0.90446 0.77318 0.91246 0.90653 0.91422 0.90903 0.81878 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.26 12.82 -35.23 -0.45 -0.19 16 2 C -0.08 0.14 2.81 36.00 0.10 0.24 16 3 Si 0.68 -1.80 29.87 -169.99 -5.08 -6.87 16 4 C -0.10 0.01 5.40 -104.36 -0.56 -0.55 16 5 C -0.05 -0.01 9.83 -39.31 -0.39 -0.40 16 6 C -0.11 -0.15 9.63 -39.05 -0.38 -0.52 16 7 C 0.08 0.18 6.75 -83.01 -0.56 -0.38 16 8 C 0.57 1.81 7.78 -12.18 -0.09 1.72 16 9 O -0.53 -3.15 15.99 5.35 0.09 -3.06 16 10 N -0.71 -0.54 5.07 -54.65 -0.28 -0.81 16 11 C 0.14 0.04 2.45 -67.94 -0.17 -0.13 16 12 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 13 C -0.12 0.18 5.39 -26.73 -0.14 0.03 16 14 C -0.11 0.04 5.57 -26.73 -0.15 -0.11 16 15 C 0.10 -0.02 3.47 -26.73 -0.09 -0.12 16 16 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 17 O -0.57 -0.57 13.32 -35.23 -0.47 -1.04 16 18 C -0.15 0.05 5.55 -26.70 -0.15 -0.10 16 19 C -0.13 -0.03 5.50 -26.70 -0.15 -0.17 16 20 N -0.45 -0.66 9.54 -9.80 -0.09 -0.76 16 21 C 0.11 0.01 9.84 -17.56 -0.17 -0.16 16 22 H 0.38 -1.70 8.74 45.56 0.40 -1.30 16 23 H 0.08 -0.31 7.96 -51.93 -0.41 -0.73 16 24 H -0.26 0.13 7.11 56.52 0.40 0.54 16 25 H -0.25 -0.09 7.05 56.52 0.40 0.31 16 26 H 0.15 -0.23 8.06 -52.49 -0.42 -0.65 16 27 H 0.15 0.13 7.64 -52.49 -0.40 -0.27 16 28 H 0.41 -0.28 7.93 -40.82 -0.32 -0.60 16 29 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.38 -1.06 9.08 45.56 0.41 -0.64 16 34 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 36 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 38 H 0.16 -0.35 4.88 -52.49 -0.26 -0.60 16 LS Contribution 315.89 15.07 4.76 4.76 Total: 0.00 -8.02 315.89 -8.83 -16.85 By element: Atomic # 1 Polarization: -3.81 SS G_CDS: -4.40 Total: -8.22 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -2.90 Total: -0.64 kcal Atomic # 7 Polarization: -1.20 SS G_CDS: -0.37 Total: -1.57 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -0.84 Total: -4.30 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.08 Total: -6.87 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -8.02 -8.83 -16.85 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13287726.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.770 kcal (2) G-P(sol) polarization free energy of solvation -8.021 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.848 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.618 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds