Wall clock time and date at job start Sat Mar 6 2021 15:00:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.34657 * 124.85076 * 2 1 4 4 C 1.36768 * 108.39686 * 180.26087 * 3 2 1 5 5 C 1.47265 * 126.94308 * 179.69666 * 4 3 2 6 6 O 1.21626 * 119.99891 * 180.02562 * 5 4 3 7 7 N 1.34770 * 119.99819 * 0.02562 * 5 4 3 8 8 C 1.46499 * 120.00106 * 180.02562 * 7 5 4 9 9 H 1.09003 * 109.47253 * 34.99003 * 8 7 5 10 10 C 1.53000 * 109.47619 * 154.99862 * 8 7 5 11 11 C 1.52995 * 109.47078 * 179.97438 * 10 8 7 12 12 C 1.53002 * 109.47212 * 299.99642 * 11 10 8 13 13 H 1.08996 * 109.47518 * 300.00381 * 12 11 10 14 14 O 1.42901 * 109.47109 * 180.02562 * 12 11 10 15 15 C 1.53000 * 109.46806 * 60.00192 * 12 11 10 16 16 C 1.52998 * 109.47399 * 300.00052 * 15 12 11 17 17 C 1.46690 * 106.11411 * 359.59634 * 4 3 2 18 18 C 1.34482 * 106.33151 * 0.40025 * 17 4 3 19 19 C 1.50708 * 125.57220 * 179.75831 * 18 17 4 20 20 O 1.42904 * 109.47164 * 149.99653 * 19 18 17 21 21 Si 1.86304 * 109.46917 * 29.99525 * 19 18 17 22 22 H 1.08998 * 109.46661 * 90.03323 * 1 2 3 23 23 H 1.09004 * 109.47352 * 210.02934 * 1 2 3 24 24 H 1.08996 * 109.47278 * 330.03560 * 1 2 3 25 25 H 1.08002 * 125.79869 * 359.97438 * 3 2 1 26 26 H 0.96998 * 120.00179 * 359.97438 * 7 5 4 27 27 H 1.08997 * 109.46516 * 300.00030 * 10 8 7 28 28 H 1.09002 * 109.46794 * 59.99503 * 10 8 7 29 29 H 1.08996 * 109.47190 * 60.00224 * 11 10 8 30 30 H 1.09005 * 109.47160 * 179.97438 * 11 10 8 31 31 H 0.96700 * 114.00028 * 179.97438 * 14 12 11 32 32 H 1.09002 * 109.46794 * 60.00268 * 15 12 11 33 33 H 1.09007 * 109.47081 * 179.97438 * 15 12 11 34 34 H 1.09003 * 109.46607 * 300.00095 * 16 15 12 35 35 H 1.08996 * 109.46959 * 180.02562 * 16 15 12 36 36 H 1.07999 * 126.83431 * 180.12143 * 17 4 3 37 37 H 1.09000 * 109.47190 * 269.99908 * 19 18 17 38 38 H 0.96697 * 113.99310 * 180.02562 * 20 19 18 39 39 H 1.48503 * 109.99840 * 60.00602 * 21 19 18 40 40 H 1.48499 * 109.99736 * 181.31561 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 -0.0059 5 6 4.7284 1.5958 -0.0143 6 8 5.8446 1.1128 -0.0194 7 7 4.5733 2.9345 -0.0163 8 6 5.7493 3.8081 -0.0251 9 1 6.5396 3.3476 -0.6182 10 6 5.3757 5.1604 -0.6355 11 6 6.6037 6.0728 -0.6441 12 6 7.0959 6.2791 0.7898 13 1 6.3055 6.7393 1.3826 14 8 8.2426 7.1318 0.7817 15 6 7.4696 4.9268 1.4001 16 6 6.2416 4.0143 1.4088 17 6 3.5375 -0.7492 0.0002 18 6 2.2448 -1.1197 0.0002 19 6 1.7397 -2.5397 0.0003 20 8 0.4807 -2.5974 0.6739 21 14 2.9649 -3.6344 0.8787 22 1 -0.3632 -0.0006 -1.0277 23 1 -0.3634 -0.8897 0.5143 24 1 -0.3633 0.8903 0.5133 25 1 1.8767 2.1241 -0.0004 26 1 3.6831 3.3197 -0.0125 27 1 5.0246 5.0133 -1.6568 28 1 4.5855 5.6208 -0.0424 29 1 7.3941 5.6126 -1.2370 30 1 6.3376 7.0361 -1.0794 31 1 8.6088 7.3068 1.6594 32 1 8.2601 4.4667 0.8073 33 1 7.8208 5.0738 2.4216 34 1 5.4512 4.4746 2.0016 35 1 6.5078 3.0511 1.8440 36 1 4.3981 -1.4017 -0.0002 37 1 1.6181 -2.8821 -1.0273 38 1 0.0957 -3.4836 0.7125 39 1 3.1396 -3.1779 2.2810 40 1 2.4938 -5.0425 0.8580 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13287730.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:29 Heat of formation + Delta-G solvation = -72.668550 kcal Electronic energy + Delta-G solvation = -22204.261177 eV Core-core repulsion = 18793.035639 eV Total energy + Delta-G solvation = -3411.225538 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.38536 -40.71146 -39.23213 -37.97533 -36.81441 -34.34023 -33.68715 -31.85880 -31.62615 -29.37643 -27.46468 -26.18680 -24.03096 -23.82787 -22.51350 -21.24527 -20.77870 -20.13671 -18.67954 -18.55236 -18.16718 -17.10111 -16.91861 -16.66911 -16.09612 -15.83760 -15.52084 -15.47490 -15.36919 -14.68276 -14.57138 -14.45129 -14.11928 -13.86758 -13.46108 -13.31673 -13.24717 -13.18821 -13.05587 -12.93610 -12.56284 -12.36102 -12.15568 -12.01058 -11.69502 -11.26484 -10.90360 -10.78990 -10.63538 -9.92168 -9.49869 -9.13306 -4.93636 0.81752 1.03938 1.51005 1.58270 1.87777 2.05134 2.32210 2.75352 2.93248 3.23303 3.60240 3.62533 3.73967 3.84632 3.85752 4.04197 4.14128 4.21004 4.21936 4.23344 4.30251 4.33107 4.42567 4.46368 4.53505 4.66729 4.72225 4.85795 4.95784 5.01492 5.04198 5.08584 5.11599 5.14563 5.29688 5.38696 5.63084 5.76470 6.04371 6.15910 6.25658 6.72307 6.72590 7.53449 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.423 5.423 3 C 0.048 3.952 4 C -0.227 4.227 5 C 0.593 3.407 6 O -0.540 6.540 7 N -0.730 5.730 8 C 0.146 3.854 9 H 0.092 0.908 10 C -0.123 4.123 11 C -0.110 4.110 12 C 0.103 3.897 13 H 0.055 0.945 14 O -0.568 6.568 15 C -0.150 4.150 16 C -0.127 4.127 17 C -0.134 4.134 18 C 0.024 3.976 19 C -0.049 4.049 20 O -0.542 6.542 21 Si 0.708 3.292 22 H 0.071 0.929 23 H 0.114 0.886 24 H 0.080 0.920 25 H 0.170 0.830 26 H 0.396 0.604 27 H 0.077 0.923 28 H 0.070 0.930 29 H 0.074 0.926 30 H 0.075 0.925 31 H 0.379 0.621 32 H 0.075 0.925 33 H 0.068 0.932 34 H 0.064 0.936 35 H 0.073 0.927 36 H 0.158 0.842 37 H 0.080 0.920 38 H 0.383 0.617 39 H -0.252 1.252 40 H -0.258 1.258 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.106 0.224 -0.418 5.128 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.097 5.097 3 C -0.088 4.088 4 C -0.237 4.237 5 C 0.382 3.618 6 O -0.418 6.418 7 N -0.381 5.381 8 C 0.041 3.959 9 H 0.110 0.890 10 C -0.161 4.161 11 C -0.148 4.148 12 C 0.044 3.956 13 H 0.073 0.927 14 O -0.374 6.374 15 C -0.188 4.188 16 C -0.166 4.166 17 C -0.158 4.158 18 C -0.085 4.085 19 C -0.158 4.158 20 O -0.351 6.351 21 Si 0.606 3.394 22 H 0.090 0.910 23 H 0.132 0.868 24 H 0.098 0.902 25 H 0.187 0.813 26 H 0.230 0.770 27 H 0.096 0.904 28 H 0.088 0.912 29 H 0.093 0.907 30 H 0.094 0.906 31 H 0.227 0.773 32 H 0.093 0.907 33 H 0.086 0.914 34 H 0.083 0.917 35 H 0.092 0.908 36 H 0.176 0.824 37 H 0.098 0.902 38 H 0.233 0.767 39 H -0.176 1.176 40 H -0.183 1.183 Dipole moment (debyes) X Y Z Total from point charges -4.546 -0.101 -0.343 4.560 hybrid contribution -1.722 0.010 0.712 1.864 sum -6.268 -0.091 0.369 6.279 Atomic orbital electron populations 1.22474 0.76337 1.05905 1.03678 1.43453 1.07103 1.04941 1.54187 1.21914 0.90162 0.91778 1.04948 1.20260 0.91475 0.93803 1.18168 1.17370 0.88041 0.81241 0.75178 1.90783 1.25762 1.75140 1.50084 1.45883 1.09477 1.05812 1.76887 1.20991 0.88483 0.89738 0.96679 0.89010 1.21764 0.98216 0.94218 1.01947 1.21401 0.97451 1.00213 0.95708 1.21853 0.87541 0.89255 0.96945 0.92705 1.86516 1.46714 1.69541 1.34652 1.22236 0.98743 0.96159 1.01655 1.21868 0.97458 1.00412 0.96841 1.21538 0.94470 0.93158 1.06618 1.19647 0.90216 0.86858 1.11812 1.24455 0.92656 0.97288 1.01440 1.86417 1.34316 1.34682 1.79714 0.94263 0.86302 0.76142 0.82659 0.91002 0.86782 0.90155 0.81306 0.77021 0.90419 0.91163 0.90685 0.90614 0.77344 0.90664 0.91354 0.91712 0.90794 0.82422 0.90185 0.76701 1.17615 1.18251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 10.71 59.85 0.64 0.54 16 2 N -0.42 -0.29 3.09 -119.89 -0.37 -0.66 16 3 C 0.05 0.01 10.83 -16.84 -0.18 -0.18 16 4 C -0.23 -0.59 6.29 -103.35 -0.65 -1.24 16 5 C 0.59 2.18 7.77 -12.59 -0.10 2.09 16 6 O -0.54 -4.05 16.63 5.25 0.09 -3.96 16 7 N -0.73 -0.24 5.07 -54.93 -0.28 -0.52 16 8 C 0.15 0.06 2.45 -67.93 -0.17 -0.10 16 9 H 0.09 0.24 7.58 -51.93 -0.39 -0.15 16 10 C -0.12 0.18 5.39 -26.73 -0.14 0.04 16 11 C -0.11 0.02 5.57 -26.73 -0.15 -0.13 16 12 C 0.10 -0.01 3.47 -26.73 -0.09 -0.10 16 13 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 14 O -0.57 -0.68 13.32 -35.23 -0.47 -1.15 16 15 C -0.15 0.00 5.55 -26.73 -0.15 -0.14 16 16 C -0.13 -0.06 5.49 -26.73 -0.15 -0.20 16 17 C -0.13 -0.34 9.49 -37.50 -0.36 -0.69 16 18 C 0.02 0.04 6.17 -81.86 -0.51 -0.47 16 19 C -0.05 0.04 2.97 36.01 0.11 0.15 16 20 O -0.54 0.61 9.69 -35.23 -0.34 0.27 16 21 Si 0.71 -0.58 31.12 -169.99 -5.29 -5.87 16 22 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 23 H 0.11 -0.13 5.13 -51.93 -0.27 -0.40 16 24 H 0.08 -0.27 8.13 -51.93 -0.42 -0.70 16 25 H 0.17 -0.59 7.45 -52.49 -0.39 -0.98 16 26 H 0.40 -0.99 7.54 -40.82 -0.31 -1.30 16 27 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 31 H 0.38 -0.99 9.08 45.56 0.41 -0.57 16 32 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.07 0.19 8.14 -51.93 -0.42 -0.23 16 36 H 0.16 0.21 6.89 -52.49 -0.36 -0.16 16 37 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 38 H 0.38 -1.87 8.74 45.56 0.40 -1.47 16 39 H -0.25 -0.79 7.11 56.52 0.40 -0.38 16 40 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 LS Contribution 325.22 15.07 4.90 4.90 Total: 0.00 -9.62 325.22 -8.82 -18.44 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -5.17 Total: -10.99 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -1.89 Total: -0.45 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.65 Total: -1.18 kcal Atomic # 8 Polarization: -4.13 SS G_CDS: -0.72 Total: -4.85 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: -5.29 Total: -5.87 kcal Total LS contribution 4.90 Total: 4.90 kcal Total: -9.62 -8.82 -18.44 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13287730.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.231 kcal (2) G-P(sol) polarization free energy of solvation -9.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.821 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.437 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds