Wall clock time and date at job start Sat Mar 6 2021 15:00:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86300 * 109.47208 * 2 1 4 4 C 1.50696 * 109.47191 * 119.99867 * 2 1 3 5 5 C 1.34845 * 125.90396 * 217.25083 * 4 2 1 6 6 C 1.40940 * 107.47367 * 179.97438 * 5 4 2 7 7 C 1.34853 * 107.46893 * 359.97438 * 6 5 4 8 8 N 1.36572 * 108.19777 * 359.77297 * 7 6 5 9 9 C 1.40197 * 125.66883 * 180.26265 * 8 7 6 10 10 C 1.38822 * 120.06494 * 55.63359 * 9 8 7 11 11 C 1.38126 * 119.93450 * 179.74338 * 10 9 8 12 12 C 1.38280 * 120.06136 * 0.50532 * 11 10 9 13 13 C 1.50700 * 119.93108 * 179.74702 * 12 11 10 14 14 C 1.50700 * 109.47151 * 270.02089 * 13 12 11 15 15 O 1.21287 * 119.99877 * 0.02562 * 14 13 12 16 16 N 1.34774 * 120.00074 * 179.97438 * 14 13 12 17 17 C 1.46506 * 119.99589 * 180.02562 * 16 14 13 18 18 H 1.08991 * 109.47331 * 325.00031 * 17 16 14 19 19 C 1.53006 * 109.47051 * 85.00504 * 17 16 14 20 20 C 1.53002 * 109.47038 * 179.97438 * 19 17 16 21 21 C 1.53002 * 109.46863 * 299.99986 * 20 19 17 22 22 H 1.09001 * 109.46919 * 299.99724 * 21 20 19 23 23 O 1.42903 * 109.46749 * 180.02562 * 21 20 19 24 24 C 1.52990 * 109.47556 * 60.00125 * 21 20 19 25 25 C 1.53002 * 109.46933 * 299.99832 * 24 21 20 26 26 C 1.38271 * 120.13322 * 359.76958 * 12 11 10 27 27 C 1.38124 * 120.06898 * 359.97438 * 26 12 11 28 28 H 0.96696 * 114.00314 * 59.99669 * 1 2 3 29 29 H 1.08995 * 109.46674 * 239.99609 * 2 1 3 30 30 H 1.48494 * 110.00406 * 60.00104 * 3 2 1 31 31 H 1.48497 * 109.99887 * 181.32218 * 3 2 1 32 32 H 1.08001 * 126.25979 * 359.93894 * 5 4 2 33 33 H 1.08003 * 126.26626 * 180.02562 * 6 5 4 34 34 H 1.07996 * 125.90225 * 179.97438 * 7 6 5 35 35 H 1.08000 * 120.03327 * 359.97438 * 10 9 8 36 36 H 1.07994 * 119.97248 * 180.25427 * 11 10 9 37 37 H 1.08999 * 109.47747 * 30.02201 * 13 12 11 38 38 H 1.08996 * 109.47123 * 150.02337 * 13 12 11 39 39 H 0.96999 * 120.00175 * 0.02562 * 16 14 13 40 40 H 1.08998 * 109.46948 * 299.99494 * 19 17 16 41 41 H 1.09002 * 109.46997 * 59.99635 * 19 17 16 42 42 H 1.08998 * 109.47126 * 179.97438 * 20 19 17 43 43 H 1.09001 * 109.47127 * 59.99582 * 20 19 17 44 44 H 0.96699 * 113.99961 * 59.99582 * 23 21 20 45 45 H 1.09005 * 109.47570 * 180.02562 * 24 21 20 46 46 H 1.09001 * 109.47334 * 59.99853 * 24 21 20 47 47 H 1.09002 * 109.47277 * 299.99619 * 25 24 21 48 48 H 1.09003 * 109.46824 * 179.97438 * 25 24 21 49 49 H 1.08003 * 119.97054 * 179.97438 * 26 12 11 50 50 H 1.07999 * 120.03699 * 179.97438 * 27 26 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 3.0147 -0.3656 1.9557 6 6 3.1256 -1.2883 3.0153 7 6 2.1057 -2.1628 2.8991 8 7 1.3643 -1.8107 1.8076 9 6 0.2140 -2.4709 1.3532 10 6 -0.8643 -2.6571 2.2075 11 6 -1.9983 -3.3032 1.7554 12 6 -2.0561 -3.7736 0.4563 13 6 -3.2927 -4.4831 -0.0321 14 6 -3.1607 -5.9611 0.2309 15 8 -2.1611 -6.3955 0.7631 16 7 -4.1538 -6.8002 -0.1243 17 6 -4.0256 -8.2369 0.1320 18 1 -2.9851 -8.5367 0.0078 19 6 -4.4773 -8.5423 1.5616 20 6 -4.3440 -10.0429 1.8290 21 6 -5.2196 -10.8166 0.8412 22 1 -6.2600 -10.5164 0.9655 23 8 -5.0955 -12.2181 1.0913 24 6 -4.7680 -10.5113 -0.5883 25 6 -4.9012 -9.0107 -0.8557 26 6 -0.9815 -3.5947 -0.3952 27 6 0.1532 -2.9447 0.0496 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5139 -0.8899 30 1 1.5616 2.4679 1.2084 31 1 3.5346 1.7702 -0.0322 32 1 3.6765 0.4651 1.7599 33 1 3.8876 -1.2934 3.7808 34 1 1.9074 -2.9955 3.5576 35 1 -0.8180 -2.2938 3.2235 36 1 -2.8391 -3.4447 2.4182 37 1 -4.1653 -4.0969 0.4946 38 1 -3.4099 -4.3137 -1.1024 39 1 -4.9534 -6.4528 -0.5495 40 1 -3.8538 -7.9907 2.2652 41 1 -5.5179 -8.2424 1.6857 42 1 -4.6654 -10.2604 2.8476 43 1 -3.3036 -10.3431 1.7047 44 1 -5.3653 -12.4842 1.9810 45 1 -5.3920 -11.0622 -1.2921 46 1 -3.7275 -10.8115 -0.7126 47 1 -5.9417 -8.7105 -0.7315 48 1 -4.5790 -8.7932 -1.8740 49 1 -1.0293 -3.9635 -1.4091 50 1 0.9924 -2.8055 -0.6158 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13287746.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:36 Heat of formation + Delta-G solvation = -41.047467 kcal Electronic energy + Delta-G solvation = -31349.007246 eV Core-core repulsion = 27115.173101 eV Total energy + Delta-G solvation = -4233.834145 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.56967 -41.28140 -40.10343 -39.25741 -37.63146 -37.00057 -34.80290 -34.44976 -32.08041 -31.98546 -31.87191 -31.10071 -29.57154 -27.51268 -25.90211 -23.97966 -23.87797 -23.81006 -22.76283 -21.51558 -21.39980 -20.96264 -20.41162 -18.66244 -18.32243 -18.29963 -18.11671 -17.63351 -16.97725 -16.54654 -16.18579 -15.99394 -15.70585 -15.63597 -15.58335 -15.28304 -14.93180 -14.83347 -14.53027 -14.47802 -14.42368 -14.24044 -14.10865 -13.42628 -13.40416 -13.34052 -13.21861 -13.14352 -13.07000 -12.96476 -12.66211 -12.60152 -12.44050 -12.27138 -12.06323 -11.86634 -11.82636 -11.37810 -10.94443 -10.80519 -10.51541 -10.16071 -10.10459 -9.89686 -9.13069 -8.94802 -4.97769 0.11683 0.44487 1.09735 1.43549 1.63334 1.71750 2.02829 2.03853 2.07049 2.17567 2.77562 3.13739 3.29228 3.49516 3.57838 3.60879 3.76997 3.81159 3.86703 3.94087 3.96700 4.05308 4.09936 4.14805 4.19220 4.25230 4.30929 4.31811 4.35256 4.38003 4.43237 4.50371 4.55484 4.61722 4.68156 4.74575 4.86296 4.89404 4.93537 4.99559 5.01784 5.03325 5.15608 5.25264 5.26929 5.27857 5.31023 5.43840 5.45633 5.55176 5.84457 6.01063 6.27679 6.43142 6.56834 6.62217 6.64456 7.21113 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.048 4.048 3 Si 0.710 3.290 4 C 0.036 3.964 5 C -0.201 4.201 6 C -0.188 4.188 7 C -0.004 4.004 8 N -0.388 5.388 9 C 0.139 3.861 10 C -0.111 4.111 11 C -0.089 4.089 12 C -0.064 4.064 13 C -0.103 4.103 14 C 0.514 3.486 15 O -0.526 6.526 16 N -0.730 5.730 17 C 0.143 3.857 18 H 0.090 0.910 19 C -0.126 4.126 20 C -0.150 4.150 21 C 0.103 3.897 22 H 0.056 0.944 23 O -0.568 6.568 24 C -0.110 4.110 25 C -0.123 4.123 26 C -0.089 4.089 27 C -0.098 4.098 28 H 0.382 0.618 29 H 0.072 0.928 30 H -0.253 1.253 31 H -0.255 1.255 32 H 0.139 0.861 33 H 0.144 0.856 34 H 0.167 0.833 35 H 0.126 0.874 36 H 0.127 0.873 37 H 0.105 0.895 38 H 0.106 0.894 39 H 0.401 0.599 40 H 0.071 0.929 41 H 0.066 0.934 42 H 0.069 0.931 43 H 0.074 0.926 44 H 0.380 0.620 45 H 0.076 0.924 46 H 0.074 0.926 47 H 0.071 0.929 48 H 0.077 0.923 49 H 0.127 0.873 50 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.074 1.621 -4.291 7.611 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.158 4.158 3 Si 0.609 3.391 4 C -0.074 4.074 5 C -0.225 4.225 6 C -0.212 4.212 7 C -0.131 4.131 8 N -0.061 5.061 9 C 0.050 3.950 10 C -0.130 4.130 11 C -0.108 4.108 12 C -0.064 4.064 13 C -0.143 4.143 14 C 0.300 3.700 15 O -0.401 6.401 16 N -0.382 5.382 17 C 0.039 3.961 18 H 0.108 0.892 19 C -0.165 4.165 20 C -0.189 4.189 21 C 0.044 3.956 22 H 0.074 0.926 23 O -0.374 6.374 24 C -0.148 4.148 25 C -0.161 4.161 26 C -0.108 4.108 27 C -0.117 4.117 28 H 0.229 0.771 29 H 0.090 0.910 30 H -0.177 1.177 31 H -0.180 1.180 32 H 0.156 0.844 33 H 0.161 0.839 34 H 0.184 0.816 35 H 0.144 0.856 36 H 0.145 0.855 37 H 0.124 0.876 38 H 0.124 0.876 39 H 0.235 0.765 40 H 0.090 0.910 41 H 0.084 0.916 42 H 0.087 0.913 43 H 0.093 0.907 44 H 0.227 0.773 45 H 0.095 0.905 46 H 0.093 0.907 47 H 0.090 0.910 48 H 0.096 0.904 49 H 0.145 0.855 50 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -4.817 1.435 -3.642 6.207 hybrid contribution -0.453 -0.421 0.776 0.992 sum -5.270 1.014 -2.867 6.084 Atomic orbital electron populations 1.86526 1.16986 1.81772 1.49592 1.24414 0.85767 1.10217 0.95369 0.95628 0.80551 0.75648 0.87253 1.19974 0.97131 0.91414 0.98843 1.20631 1.00128 1.03177 0.98564 1.20879 1.01150 0.97698 1.01512 1.22029 0.95192 1.03262 0.92665 1.41438 1.20052 1.22043 1.22550 1.17559 0.86053 0.97259 0.94147 1.20973 0.92039 1.00159 0.99856 1.20783 0.97604 0.97429 0.94980 1.19246 0.94892 0.98199 0.94112 1.20684 0.97976 0.91506 1.04087 1.20591 0.82872 0.88368 0.78141 1.90765 1.29689 1.78231 1.41450 1.46091 1.21186 1.07549 1.63398 1.21032 1.01271 0.79447 0.94391 0.89155 1.21857 1.01902 0.95886 0.96875 1.22240 1.01858 0.95118 0.99634 1.21844 0.97751 0.80909 0.95062 0.92624 1.86519 1.90077 1.23389 1.37402 1.21406 1.03160 0.94899 0.95368 1.21767 1.00273 0.94615 0.99475 1.20775 0.92195 0.98122 0.99694 1.20860 0.98634 0.97760 0.94414 0.77056 0.91017 1.17694 1.17989 0.84391 0.83865 0.81610 0.85616 0.85527 0.87636 0.87599 0.76507 0.90984 0.91572 0.91271 0.90730 0.77285 0.90484 0.90737 0.90992 0.90406 0.85527 0.85911 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.35 10.78 -35.23 -0.38 -0.73 16 2 C -0.05 -0.05 2.48 36.00 0.09 0.04 16 3 Si 0.71 -0.20 30.99 -169.99 -5.27 -5.47 16 4 C 0.04 0.16 6.12 -81.68 -0.50 -0.34 16 5 C -0.20 -0.92 9.40 -39.76 -0.37 -1.30 16 6 C -0.19 -0.77 10.86 -39.76 -0.43 -1.20 16 7 C 0.00 -0.01 11.21 -16.64 -0.19 -0.20 16 8 N -0.39 -1.80 2.84 -56.73 -0.16 -1.97 16 9 C 0.14 0.53 4.67 -83.59 -0.39 0.14 16 10 C -0.11 -0.33 9.76 -39.41 -0.38 -0.72 16 11 C -0.09 -0.14 9.69 -39.61 -0.38 -0.53 16 12 C -0.06 -0.05 4.37 -104.59 -0.46 -0.51 16 13 C -0.10 0.21 5.83 -29.03 -0.17 0.04 16 14 C 0.51 0.25 7.79 -10.99 -0.09 0.16 16 15 O -0.53 -2.72 15.70 5.55 0.09 -2.63 16 16 N -0.73 1.44 5.08 -53.80 -0.27 1.16 16 17 C 0.14 -0.13 2.46 -67.92 -0.17 -0.30 16 18 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 19 C -0.13 0.09 5.49 -26.73 -0.15 -0.06 16 20 C -0.15 0.11 5.55 -26.73 -0.15 -0.04 16 21 C 0.10 -0.07 3.47 -26.73 -0.09 -0.16 16 22 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 23 O -0.57 -0.42 13.32 -35.23 -0.47 -0.89 16 24 C -0.11 0.10 5.57 -26.74 -0.15 -0.05 16 25 C -0.12 0.31 5.39 -26.73 -0.14 0.16 16 26 C -0.09 -0.11 9.69 -39.61 -0.38 -0.49 16 27 C -0.10 -0.25 8.49 -39.40 -0.33 -0.59 16 28 H 0.38 -1.68 8.74 45.56 0.40 -1.28 16 29 H 0.07 -0.04 7.96 -51.93 -0.41 -0.45 16 30 H -0.25 -0.91 7.11 56.52 0.40 -0.51 16 31 H -0.25 -0.52 6.96 56.52 0.39 -0.13 16 32 H 0.14 0.50 6.52 -52.49 -0.34 0.16 16 33 H 0.14 0.30 8.06 -52.48 -0.42 -0.13 16 34 H 0.17 0.32 8.06 -52.49 -0.42 -0.11 16 35 H 0.13 0.30 8.06 -52.49 -0.42 -0.12 16 36 H 0.13 -0.03 8.06 -52.49 -0.42 -0.45 16 37 H 0.11 -0.43 8.08 -51.93 -0.42 -0.85 16 38 H 0.11 -0.45 8.08 -51.93 -0.42 -0.87 16 39 H 0.40 -1.96 8.60 -40.82 -0.35 -2.31 16 40 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 41 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 44 H 0.38 -1.15 9.08 45.56 0.41 -0.74 16 45 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 46 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 47 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 48 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 49 H 0.13 -0.09 8.06 -52.48 -0.42 -0.51 16 50 H 0.12 0.25 8.06 -52.49 -0.42 -0.17 16 LS Contribution 407.34 15.07 6.14 6.14 Total: 0.00 -11.28 407.34 -12.24 -23.52 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -7.08 Total: -13.21 kcal Atomic # 6 Polarization: -1.09 SS G_CDS: -4.84 Total: -5.93 kcal Atomic # 7 Polarization: -0.37 SS G_CDS: -0.43 Total: -0.80 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.76 Total: -4.25 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.27 Total: -5.47 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -11.28 -12.24 -23.52 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13287746.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.523 kcal (2) G-P(sol) polarization free energy of solvation -11.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.806 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.241 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.524 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.047 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds