Wall clock time and date at job start Sat Mar 6 2021 15:00:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86300 * 109.47208 * 2 1 4 4 C 1.50696 * 109.47191 * 119.99867 * 2 1 3 5 5 C 1.34845 * 125.90396 * 217.25083 * 4 2 1 6 6 C 1.40940 * 107.47367 * 179.97438 * 5 4 2 7 7 C 1.34853 * 107.46893 * 359.97438 * 6 5 4 8 8 N 1.36572 * 108.19777 * 359.77297 * 7 6 5 9 9 C 1.40197 * 125.66883 * 180.26265 * 8 7 6 10 10 C 1.38822 * 120.06494 * 55.63359 * 9 8 7 11 11 C 1.38126 * 119.93450 * 179.74338 * 10 9 8 12 12 C 1.38280 * 120.06136 * 0.50532 * 11 10 9 13 13 C 1.50700 * 119.93108 * 179.74702 * 12 11 10 14 14 C 1.50700 * 109.47151 * 270.02089 * 13 12 11 15 15 O 1.21287 * 119.99877 * 0.02562 * 14 13 12 16 16 N 1.34774 * 120.00074 * 179.97438 * 14 13 12 17 17 C 1.46506 * 119.99589 * 180.02562 * 16 14 13 18 18 H 1.08991 * 109.47331 * 325.00031 * 17 16 14 19 19 C 1.53006 * 109.47051 * 85.00504 * 17 16 14 20 20 C 1.53002 * 109.47038 * 179.97438 * 19 17 16 21 21 C 1.53002 * 109.46863 * 299.99986 * 20 19 17 22 22 H 1.09001 * 109.46919 * 299.99724 * 21 20 19 23 23 O 1.42903 * 109.46749 * 180.02562 * 21 20 19 24 24 C 1.52990 * 109.47556 * 60.00125 * 21 20 19 25 25 C 1.53002 * 109.46933 * 299.99832 * 24 21 20 26 26 C 1.38271 * 120.13322 * 359.76958 * 12 11 10 27 27 C 1.38124 * 120.06898 * 359.97438 * 26 12 11 28 28 H 0.96696 * 114.00314 * 59.99669 * 1 2 3 29 29 H 1.08995 * 109.46674 * 239.99609 * 2 1 3 30 30 H 1.48494 * 110.00406 * 60.00104 * 3 2 1 31 31 H 1.48497 * 109.99887 * 181.32218 * 3 2 1 32 32 H 1.08001 * 126.25979 * 359.93894 * 5 4 2 33 33 H 1.08003 * 126.26626 * 180.02562 * 6 5 4 34 34 H 1.07996 * 125.90225 * 179.97438 * 7 6 5 35 35 H 1.08000 * 120.03327 * 359.97438 * 10 9 8 36 36 H 1.07994 * 119.97248 * 180.25427 * 11 10 9 37 37 H 1.08999 * 109.47747 * 30.02201 * 13 12 11 38 38 H 1.08996 * 109.47123 * 150.02337 * 13 12 11 39 39 H 0.96999 * 120.00175 * 0.02562 * 16 14 13 40 40 H 1.08998 * 109.46948 * 299.99494 * 19 17 16 41 41 H 1.09002 * 109.46997 * 59.99635 * 19 17 16 42 42 H 1.08998 * 109.47126 * 179.97438 * 20 19 17 43 43 H 1.09001 * 109.47127 * 59.99582 * 20 19 17 44 44 H 0.96699 * 113.99961 * 59.99582 * 23 21 20 45 45 H 1.09005 * 109.47570 * 180.02562 * 24 21 20 46 46 H 1.09001 * 109.47334 * 59.99853 * 24 21 20 47 47 H 1.09002 * 109.47277 * 299.99619 * 25 24 21 48 48 H 1.09003 * 109.46824 * 179.97438 * 25 24 21 49 49 H 1.08003 * 119.97054 * 179.97438 * 26 12 11 50 50 H 1.07999 * 120.03699 * 179.97438 * 27 26 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 3.0147 -0.3656 1.9557 6 6 3.1256 -1.2883 3.0153 7 6 2.1057 -2.1628 2.8991 8 7 1.3643 -1.8107 1.8076 9 6 0.2140 -2.4709 1.3532 10 6 -0.8643 -2.6571 2.2075 11 6 -1.9983 -3.3032 1.7554 12 6 -2.0561 -3.7736 0.4563 13 6 -3.2927 -4.4831 -0.0321 14 6 -3.1607 -5.9611 0.2309 15 8 -2.1611 -6.3955 0.7631 16 7 -4.1538 -6.8002 -0.1243 17 6 -4.0256 -8.2369 0.1320 18 1 -2.9851 -8.5367 0.0078 19 6 -4.4773 -8.5423 1.5616 20 6 -4.3440 -10.0429 1.8290 21 6 -5.2196 -10.8166 0.8412 22 1 -6.2600 -10.5164 0.9655 23 8 -5.0955 -12.2181 1.0913 24 6 -4.7680 -10.5113 -0.5883 25 6 -4.9012 -9.0107 -0.8557 26 6 -0.9815 -3.5947 -0.3952 27 6 0.1532 -2.9447 0.0496 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5139 -0.8899 30 1 1.5616 2.4679 1.2084 31 1 3.5346 1.7702 -0.0322 32 1 3.6765 0.4651 1.7599 33 1 3.8876 -1.2934 3.7808 34 1 1.9074 -2.9955 3.5576 35 1 -0.8180 -2.2938 3.2235 36 1 -2.8391 -3.4447 2.4182 37 1 -4.1653 -4.0969 0.4946 38 1 -3.4099 -4.3137 -1.1024 39 1 -4.9534 -6.4528 -0.5495 40 1 -3.8538 -7.9907 2.2652 41 1 -5.5179 -8.2424 1.6857 42 1 -4.6654 -10.2604 2.8476 43 1 -3.3036 -10.3431 1.7047 44 1 -5.3653 -12.4842 1.9810 45 1 -5.3920 -11.0622 -1.2921 46 1 -3.7275 -10.8115 -0.7126 47 1 -5.9417 -8.7105 -0.7315 48 1 -4.5790 -8.7932 -1.8740 49 1 -1.0293 -3.9635 -1.4091 50 1 0.9924 -2.8055 -0.6158 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_13287746.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:35 Heat of formation + Delta-G solvation = -42.622323 kcal Electronic energy + Delta-G solvation = -31349.075537 eV Core-core repulsion = 27115.173101 eV Total energy + Delta-G solvation = -4233.902436 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.79464 -41.28364 -40.12520 -39.30580 -37.65536 -36.99629 -34.91940 -34.44847 -32.19009 -31.97583 -31.88225 -31.28049 -29.57300 -27.53581 -26.05320 -23.99586 -23.92672 -23.82131 -22.78637 -21.66270 -21.48342 -20.91871 -20.57665 -18.84564 -18.32201 -18.28929 -18.06362 -17.62096 -17.04607 -16.56957 -16.21077 -16.02266 -15.83122 -15.69219 -15.52777 -15.45799 -14.93884 -14.85470 -14.62798 -14.60960 -14.50522 -14.30381 -14.17911 -13.54223 -13.37277 -13.33930 -13.28829 -13.27474 -13.10794 -12.90231 -12.77433 -12.62176 -12.40953 -12.20257 -12.12140 -12.03504 -11.75261 -11.30401 -11.01171 -10.79069 -10.55849 -10.35063 -10.07286 -10.00997 -9.31628 -9.20278 -5.00309 -0.01355 0.33268 0.94321 1.30991 1.65294 1.65551 1.76441 1.87996 2.06410 2.13444 2.70137 3.26694 3.29206 3.57736 3.62667 3.69306 3.71714 3.74369 3.85802 3.97260 4.02323 4.05597 4.11859 4.17061 4.19631 4.28973 4.30511 4.32042 4.36344 4.40413 4.41715 4.43596 4.58809 4.60882 4.63883 4.79747 4.87462 4.94118 4.95988 4.99725 5.02094 5.04737 5.07564 5.10123 5.18100 5.23308 5.28824 5.32162 5.48532 5.51759 5.74321 5.77972 6.01787 6.38498 6.58519 6.83922 6.84726 7.29961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.057 4.057 3 Si 0.817 3.183 4 C 0.021 3.979 5 C -0.227 4.227 6 C -0.199 4.199 7 C -0.020 4.020 8 N -0.394 5.394 9 C 0.118 3.882 10 C -0.128 4.128 11 C -0.095 4.095 12 C -0.065 4.065 13 C -0.096 4.096 14 C 0.512 3.488 15 O -0.582 6.582 16 N -0.714 5.714 17 C 0.144 3.856 18 H 0.058 0.942 19 C -0.121 4.121 20 C -0.146 4.146 21 C 0.103 3.897 22 H 0.073 0.927 23 O -0.590 6.590 24 C -0.114 4.114 25 C -0.112 4.112 26 C -0.092 4.092 27 C -0.105 4.105 28 H 0.403 0.597 29 H 0.091 0.909 30 H -0.309 1.309 31 H -0.287 1.287 32 H 0.141 0.859 33 H 0.157 0.843 34 H 0.179 0.821 35 H 0.121 0.879 36 H 0.143 0.857 37 H 0.133 0.867 38 H 0.137 0.863 39 H 0.419 0.581 40 H 0.047 0.953 41 H 0.084 0.916 42 H 0.077 0.923 43 H 0.052 0.948 44 H 0.394 0.606 45 H 0.078 0.922 46 H 0.055 0.945 47 H 0.094 0.906 48 H 0.085 0.915 49 H 0.148 0.852 50 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.630 1.753 -5.977 10.643 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.165 4.165 3 Si 0.721 3.279 4 C -0.089 4.089 5 C -0.252 4.252 6 C -0.223 4.223 7 C -0.148 4.148 8 N -0.066 5.066 9 C 0.029 3.971 10 C -0.147 4.147 11 C -0.114 4.114 12 C -0.065 4.065 13 C -0.135 4.135 14 C 0.300 3.700 15 O -0.461 6.461 16 N -0.367 5.367 17 C 0.039 3.961 18 H 0.077 0.923 19 C -0.159 4.159 20 C -0.185 4.185 21 C 0.045 3.955 22 H 0.090 0.910 23 O -0.399 6.399 24 C -0.152 4.152 25 C -0.150 4.150 26 C -0.110 4.110 27 C -0.125 4.125 28 H 0.255 0.745 29 H 0.109 0.891 30 H -0.237 1.237 31 H -0.214 1.214 32 H 0.159 0.841 33 H 0.175 0.825 34 H 0.196 0.804 35 H 0.139 0.861 36 H 0.161 0.839 37 H 0.151 0.849 38 H 0.155 0.845 39 H 0.257 0.743 40 H 0.066 0.934 41 H 0.103 0.897 42 H 0.095 0.905 43 H 0.071 0.929 44 H 0.243 0.757 45 H 0.097 0.903 46 H 0.074 0.926 47 H 0.113 0.887 48 H 0.103 0.897 49 H 0.165 0.835 50 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -7.440 1.552 -5.377 9.310 hybrid contribution 0.311 -0.510 1.346 1.472 sum -7.129 1.042 -4.031 8.256 Atomic orbital electron populations 1.86485 1.16598 1.82368 1.51247 1.24642 0.86316 1.10938 0.94636 0.94605 0.76968 0.72357 0.83939 1.20595 0.97108 0.91476 0.99743 1.20847 1.00977 1.03925 0.99410 1.21152 1.01611 0.97692 1.01863 1.22353 0.95419 1.03848 0.93190 1.41632 1.20305 1.22135 1.22574 1.17783 0.86104 0.98270 0.94950 1.21087 0.92723 1.01070 0.99795 1.21054 0.97553 0.96983 0.95799 1.19584 0.95908 0.97382 0.93642 1.20763 0.97433 0.89014 1.06301 1.21056 0.82286 0.89530 0.77136 1.90758 1.31938 1.79269 1.44110 1.45945 1.21382 1.06862 1.62479 1.20919 0.99940 0.80292 0.94901 0.92329 1.21789 1.02367 0.95415 0.96353 1.22194 1.00697 0.95293 1.00309 1.21913 0.98425 0.80289 0.94877 0.90955 1.86484 1.90364 1.24244 1.38799 1.21445 1.02046 0.96157 0.95519 1.21691 1.01074 0.93027 0.99176 1.21079 0.91749 0.97402 1.00788 1.20961 0.99321 0.98177 0.93997 0.74531 0.89100 1.23690 1.21437 0.84144 0.82535 0.80418 0.86088 0.83934 0.84861 0.84524 0.74310 0.93373 0.89701 0.90480 0.92917 0.75669 0.90288 0.92600 0.88731 0.89670 0.83469 0.85871 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.62 10.78 -148.98 -1.61 -2.23 16 2 C -0.06 -0.13 2.48 71.23 0.18 0.05 16 3 Si 0.82 -0.06 30.99 68.60 2.13 2.06 16 4 C 0.02 0.22 6.12 41.04 0.25 0.47 16 5 C -0.23 -2.54 9.40 22.15 0.21 -2.33 16 6 C -0.20 -2.02 10.86 22.15 0.24 -1.78 16 7 C -0.02 -0.21 11.21 83.18 0.93 0.73 16 8 N -0.39 -4.35 2.84 -333.41 -0.95 -5.29 16 9 C 0.12 1.05 4.67 38.08 0.18 1.23 16 10 C -0.13 -0.93 9.76 22.38 0.22 -0.71 16 11 C -0.10 -0.30 9.69 22.25 0.22 -0.08 16 12 C -0.06 -0.05 4.37 -19.85 -0.09 -0.13 16 13 C -0.10 0.63 5.83 29.10 0.17 0.80 16 14 C 0.51 0.02 7.79 87.66 0.68 0.70 16 15 O -0.58 -6.52 15.70 -3.05 -0.05 -6.56 16 16 N -0.71 3.89 5.08 -442.51 -2.25 1.65 16 17 C 0.14 -0.29 2.46 44.99 0.11 -0.18 16 18 H 0.06 0.29 7.58 -2.39 -0.02 0.27 16 19 C -0.12 0.18 5.49 30.60 0.17 0.35 16 20 C -0.15 0.14 5.55 30.60 0.17 0.31 16 21 C 0.10 -0.18 3.47 30.59 0.11 -0.08 16 22 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 23 O -0.59 -0.93 13.32 -148.98 -1.98 -2.91 16 24 C -0.11 0.22 5.57 30.59 0.17 0.39 16 25 C -0.11 0.71 5.39 30.60 0.16 0.87 16 26 C -0.09 -0.17 9.69 22.25 0.22 0.05 16 27 C -0.11 -0.60 8.49 22.38 0.19 -0.41 16 28 H 0.40 -4.00 8.74 -74.06 -0.65 -4.64 16 29 H 0.09 -0.15 7.96 -2.39 -0.02 -0.17 16 30 H -0.31 -2.84 7.11 99.48 0.71 -2.14 16 31 H -0.29 -1.43 6.96 99.48 0.69 -0.74 16 32 H 0.14 1.31 6.52 -2.91 -0.02 1.29 16 33 H 0.16 0.92 8.06 -2.91 -0.02 0.90 16 34 H 0.18 1.08 8.06 -2.91 -0.02 1.05 16 35 H 0.12 0.84 8.06 -2.91 -0.02 0.82 16 36 H 0.14 -0.14 8.06 -2.91 -0.02 -0.17 16 37 H 0.13 -1.57 8.08 -2.39 -0.02 -1.58 16 38 H 0.14 -1.69 8.08 -2.39 -0.02 -1.71 16 39 H 0.42 -5.36 8.60 -92.71 -0.80 -6.15 16 40 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 41 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 42 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 43 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 44 H 0.39 -2.40 9.08 -74.06 -0.67 -3.07 16 45 H 0.08 -0.17 8.14 -2.38 -0.02 -0.19 16 46 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 47 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 48 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 49 H 0.15 -0.44 8.06 -2.91 -0.02 -0.46 16 50 H 0.12 0.58 8.06 -2.91 -0.02 0.55 16 Total: 0.00 -30.15 407.34 -1.35 -31.50 By element: Atomic # 1 Polarization: -17.31 SS G_CDS: -1.13 Total: -18.44 kcal Atomic # 6 Polarization: -4.26 SS G_CDS: 4.48 Total: 0.22 kcal Atomic # 7 Polarization: -0.45 SS G_CDS: -3.19 Total: -3.65 kcal Atomic # 8 Polarization: -8.07 SS G_CDS: -3.64 Total: -11.71 kcal Atomic # 14 Polarization: -0.06 SS G_CDS: 2.13 Total: 2.06 kcal Total: -30.15 -1.35 -31.50 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13287746.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.121 kcal (2) G-P(sol) polarization free energy of solvation -30.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.270 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.352 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.501 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.622 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds