Wall clock time and date at job start Sat Mar 6 2021 15:00:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86307 * 109.47148 * 2 1 4 4 C 1.50700 * 109.47336 * 239.99790 * 2 1 3 5 5 C 1.38307 * 120.34759 * 120.02416 * 4 2 1 6 6 N 1.31957 * 121.08173 * 180.02562 * 5 4 2 7 7 C 1.31662 * 121.88036 * 359.67922 * 6 5 4 8 8 C 1.39567 * 120.56026 * 0.58099 * 7 6 5 9 9 C 1.47846 * 120.55622 * 179.72697 * 8 7 6 10 10 O 1.21550 * 119.99863 * 179.72160 * 9 8 7 11 11 N 1.34773 * 120.00039 * 359.72890 * 9 8 7 12 12 C 1.46506 * 119.99969 * 179.97438 * 11 9 8 13 13 H 1.08999 * 109.47194 * 34.71875 * 12 11 9 14 14 C 1.52993 * 109.47100 * 154.71955 * 12 11 9 15 15 C 1.53006 * 109.47061 * 179.97438 * 14 12 11 16 16 C 1.53000 * 109.47260 * 300.00424 * 15 14 12 17 17 H 1.09004 * 109.47226 * 299.99900 * 16 15 14 18 18 O 1.42895 * 109.47448 * 179.97438 * 16 15 14 19 19 C 1.52996 * 109.47253 * 59.99476 * 16 15 14 20 20 C 1.52997 * 109.46691 * 274.72265 * 12 11 9 21 21 C 1.38399 * 120.34675 * 299.99950 * 4 2 1 22 22 H 0.96694 * 113.99896 * 300.00359 * 1 2 3 23 23 H 1.08996 * 109.47313 * 119.99449 * 2 1 3 24 24 H 1.48500 * 109.99795 * 178.67905 * 3 2 1 25 25 H 1.48497 * 109.99761 * 299.99524 * 3 2 1 26 26 H 1.08007 * 119.46102 * 359.97438 * 5 4 2 27 27 H 1.07993 * 119.72267 * 180.31660 * 7 6 5 28 28 H 0.97005 * 120.00161 * 359.71831 * 11 9 8 29 29 H 1.08996 * 109.47599 * 300.00068 * 14 12 11 30 30 H 1.09001 * 109.47077 * 60.00676 * 14 12 11 31 31 H 1.08999 * 109.47016 * 60.00053 * 15 14 12 32 32 H 1.08998 * 109.47401 * 180.02562 * 15 14 12 33 33 H 0.96694 * 114.00086 * 180.02562 * 18 16 15 34 34 H 1.08999 * 109.46985 * 60.00395 * 19 16 15 35 35 H 1.09005 * 109.47475 * 180.02562 * 19 16 15 36 36 H 1.09001 * 109.47659 * 299.99430 * 20 12 11 37 37 H 1.08995 * 109.47574 * 60.00208 * 20 12 11 38 38 H 1.08001 * 120.85218 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7274 -0.0454 -2.1453 6 7 3.1748 -0.6532 -3.2277 7 6 2.8929 -1.9134 -3.4843 8 6 2.0910 -2.6527 -2.6135 9 6 1.7696 -4.0661 -2.9048 10 8 1.0745 -4.7020 -2.1367 11 7 2.2475 -4.6495 -4.0218 12 6 1.9294 -6.0502 -4.3101 13 1 0.9208 -6.2729 -3.9619 14 6 2.0131 -6.2921 -5.8185 15 6 1.6816 -7.7551 -6.1196 16 6 2.6817 -8.6631 -5.4011 17 1 3.6903 -8.4400 -5.7494 18 8 2.3718 -10.0295 -5.6818 19 6 2.5980 -8.4211 -3.8927 20 6 2.9292 -6.9585 -3.5916 21 6 1.6014 -2.0354 -1.4565 22 1 -0.3933 0.4417 0.7650 23 1 1.7923 -0.5137 0.8900 24 1 3.5346 1.7703 0.0322 25 1 1.5616 2.4678 -1.2085 26 1 2.9863 0.9886 -1.9713 27 1 3.2819 -2.3778 -4.3784 28 1 2.7989 -4.1408 -4.6367 29 1 1.3009 -5.6450 -6.3304 30 1 3.0217 -6.0695 -6.1667 31 1 0.6731 -7.9782 -5.7713 32 1 1.7416 -7.9276 -7.1942 33 1 2.9665 -10.6629 -5.2574 34 1 1.5896 -8.6442 -3.5444 35 1 3.3109 -9.0676 -3.3809 36 1 3.9378 -6.7359 -3.9398 37 1 2.8695 -6.7862 -2.5170 38 1 0.9822 -2.5789 -0.7583 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13287814.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:40 Heat of formation + Delta-G solvation = -83.332462 kcal Electronic energy + Delta-G solvation = -21560.560565 eV Core-core repulsion = 18176.184084 eV Total energy + Delta-G solvation = -3384.376481 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.130 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.97152 -40.79524 -39.48530 -37.94475 -37.04663 -34.75693 -33.87980 -33.11956 -31.98678 -29.52821 -27.34778 -25.81723 -24.00532 -23.80266 -23.07867 -21.58268 -21.02877 -19.07484 -18.66864 -18.28098 -18.13320 -18.05529 -16.97884 -16.49932 -16.23472 -15.86380 -15.59836 -15.46074 -15.18361 -14.89493 -14.57331 -14.42038 -14.26293 -14.17314 -13.84177 -13.43340 -13.34099 -13.09369 -12.67347 -12.53157 -12.28120 -12.17701 -11.85115 -11.42446 -11.33398 -11.07539 -10.85589 -10.74359 -10.56143 -10.26317 -10.15470 -5.12883 -0.62512 -0.04812 1.09212 1.50243 1.68562 1.79796 1.89002 2.57168 2.93209 3.11407 3.15653 3.43658 3.49227 3.58485 3.61469 3.64483 3.71252 3.90041 4.01450 4.03050 4.09187 4.15049 4.18027 4.29559 4.32898 4.35458 4.53848 4.73615 4.77714 4.83705 4.89129 4.92740 4.98788 5.02831 5.14744 5.20740 5.24693 5.36503 6.29121 6.46182 6.56733 6.64923 7.03566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.070 4.070 3 Si 0.687 3.313 4 C -0.133 4.133 5 C 0.122 3.878 6 N -0.477 5.477 7 C 0.138 3.862 8 C -0.187 4.187 9 C 0.567 3.433 10 O -0.526 6.526 11 N -0.722 5.722 12 C 0.143 3.857 13 H 0.094 0.906 14 C -0.125 4.125 15 C -0.110 4.110 16 C 0.103 3.897 17 H 0.056 0.944 18 O -0.568 6.568 19 C -0.150 4.150 20 C -0.127 4.127 21 C 0.015 3.985 22 H 0.387 0.613 23 H 0.082 0.918 24 H -0.250 1.250 25 H -0.246 1.246 26 H 0.154 0.846 27 H 0.163 0.837 28 H 0.400 0.600 29 H 0.079 0.921 30 H 0.072 0.928 31 H 0.075 0.925 32 H 0.077 0.923 33 H 0.380 0.620 34 H 0.075 0.925 35 H 0.070 0.930 36 H 0.067 0.933 37 H 0.073 0.927 38 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.263 1.948 1.862 3.519 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.181 4.181 3 Si 0.587 3.413 4 C -0.135 4.135 5 C -0.034 4.034 6 N -0.184 5.184 7 C -0.021 4.021 8 C -0.192 4.192 9 C 0.353 3.647 10 O -0.402 6.402 11 N -0.373 5.373 12 C 0.039 3.961 13 H 0.112 0.888 14 C -0.163 4.163 15 C -0.148 4.148 16 C 0.044 3.956 17 H 0.074 0.926 18 O -0.373 6.373 19 C -0.188 4.188 20 C -0.166 4.166 21 C -0.011 4.011 22 H 0.235 0.765 23 H 0.099 0.901 24 H -0.174 1.174 25 H -0.170 1.170 26 H 0.171 0.829 27 H 0.180 0.820 28 H 0.235 0.765 29 H 0.098 0.902 30 H 0.091 0.909 31 H 0.094 0.906 32 H 0.096 0.904 33 H 0.227 0.773 34 H 0.094 0.906 35 H 0.088 0.912 36 H 0.086 0.914 37 H 0.091 0.909 38 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 2.377 2.514 0.485 3.494 hybrid contribution 0.330 -0.980 0.513 1.154 sum 2.707 1.535 0.998 3.268 Atomic orbital electron populations 1.86486 1.16711 1.81961 1.49958 1.24606 0.86208 1.10688 0.96585 0.94886 0.80864 0.77656 0.87907 1.20424 1.00335 0.95040 0.97663 1.22686 0.92642 0.99237 0.88835 1.67702 1.21734 1.10287 1.18683 1.23035 0.92044 0.89597 0.97419 1.21053 1.03790 0.95718 0.98663 1.17969 0.79580 0.85756 0.81372 1.90818 1.37407 1.64610 1.47378 1.45963 1.53891 1.13272 1.24203 1.21105 1.00418 0.79474 0.95089 0.88765 1.21780 1.03105 0.96985 0.94391 1.21402 0.99794 0.92288 1.01299 1.21850 0.97964 0.82184 0.93617 0.92578 1.86518 1.59454 1.15878 1.75499 1.22232 1.03322 0.96469 0.96781 1.21860 0.99157 0.94065 1.01528 1.21612 0.92290 0.92838 0.94381 0.76494 0.90055 1.17448 1.17004 0.82902 0.81992 0.76450 0.90250 0.90886 0.90648 0.90396 0.77271 0.90632 0.91176 0.91440 0.90865 0.82795 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.27 12.75 -35.23 -0.45 -0.18 16 2 C -0.07 0.07 2.82 36.01 0.10 0.17 16 3 Si 0.69 -1.51 29.82 -169.99 -5.07 -6.58 16 4 C -0.13 -0.23 5.42 -104.54 -0.57 -0.80 16 5 C 0.12 0.28 9.84 -17.47 -0.17 0.10 16 6 N -0.48 -1.29 10.35 -12.91 -0.13 -1.42 16 7 C 0.14 0.10 10.71 -17.13 -0.18 -0.09 16 8 C -0.19 -0.33 5.89 -104.82 -0.62 -0.95 16 9 C 0.57 1.33 7.75 -12.33 -0.10 1.23 16 10 O -0.53 -3.11 16.08 5.32 0.09 -3.02 16 11 N -0.72 0.53 5.03 -54.75 -0.28 0.25 16 12 C 0.14 -0.07 2.46 -67.93 -0.17 -0.24 16 13 H 0.09 0.15 7.57 -51.93 -0.39 -0.25 16 14 C -0.12 0.27 5.39 -26.73 -0.14 0.13 16 15 C -0.11 0.09 5.57 -26.73 -0.15 -0.06 16 16 C 0.10 -0.07 3.47 -26.73 -0.09 -0.16 16 17 H 0.06 -0.08 8.14 -51.93 -0.42 -0.51 16 18 O -0.57 -0.40 13.32 -35.23 -0.47 -0.87 16 19 C -0.15 0.12 5.54 -26.75 -0.15 -0.02 16 20 C -0.13 0.07 5.49 -26.75 -0.15 -0.07 16 21 C 0.02 0.04 9.31 -38.87 -0.36 -0.33 16 22 H 0.39 -2.16 8.74 45.56 0.40 -1.77 16 23 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 24 H -0.25 0.00 7.11 56.52 0.40 0.41 16 25 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 26 H 0.15 0.18 4.88 -52.48 -0.26 -0.08 16 27 H 0.16 -0.47 6.42 -52.49 -0.34 -0.81 16 28 H 0.40 -1.38 6.67 -40.82 -0.27 -1.66 16 29 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 30 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 32 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 33 H 0.38 -1.18 9.08 45.56 0.41 -0.76 16 34 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 35 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 38 H 0.15 0.38 7.74 -52.49 -0.41 -0.02 16 LS Contribution 313.58 15.07 4.73 4.73 Total: 0.00 -9.43 313.58 -8.60 -18.03 By element: Atomic # 1 Polarization: -5.57 SS G_CDS: -4.27 Total: -9.84 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -2.74 Total: -1.10 kcal Atomic # 7 Polarization: -0.76 SS G_CDS: -0.41 Total: -1.17 kcal Atomic # 8 Polarization: -3.23 SS G_CDS: -0.83 Total: -4.07 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.07 Total: -6.58 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -9.43 -8.60 -18.03 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13287814.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.302 kcal (2) G-P(sol) polarization free energy of solvation -9.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.735 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.597 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.031 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds