Wall clock time and date at job start Sat Mar 6 2021 15:00:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86307 * 109.47148 * 2 1 4 4 C 1.50700 * 109.47336 * 239.99790 * 2 1 3 5 5 C 1.38307 * 120.34759 * 120.02416 * 4 2 1 6 6 N 1.31957 * 121.08173 * 180.02562 * 5 4 2 7 7 C 1.31662 * 121.88036 * 359.67922 * 6 5 4 8 8 C 1.39567 * 120.56026 * 0.58099 * 7 6 5 9 9 C 1.47846 * 120.55622 * 179.72697 * 8 7 6 10 10 O 1.21550 * 119.99863 * 179.72160 * 9 8 7 11 11 N 1.34773 * 120.00039 * 359.72890 * 9 8 7 12 12 C 1.46506 * 119.99969 * 179.97438 * 11 9 8 13 13 H 1.08999 * 109.47194 * 34.71875 * 12 11 9 14 14 C 1.52993 * 109.47100 * 154.71955 * 12 11 9 15 15 C 1.53006 * 109.47061 * 179.97438 * 14 12 11 16 16 C 1.53000 * 109.47260 * 300.00424 * 15 14 12 17 17 H 1.09004 * 109.47226 * 299.99900 * 16 15 14 18 18 O 1.42895 * 109.47448 * 179.97438 * 16 15 14 19 19 C 1.52996 * 109.47253 * 59.99476 * 16 15 14 20 20 C 1.52997 * 109.46691 * 274.72265 * 12 11 9 21 21 C 1.38399 * 120.34675 * 299.99950 * 4 2 1 22 22 H 0.96694 * 113.99896 * 300.00359 * 1 2 3 23 23 H 1.08996 * 109.47313 * 119.99449 * 2 1 3 24 24 H 1.48500 * 109.99795 * 178.67905 * 3 2 1 25 25 H 1.48497 * 109.99761 * 299.99524 * 3 2 1 26 26 H 1.08007 * 119.46102 * 359.97438 * 5 4 2 27 27 H 1.07993 * 119.72267 * 180.31660 * 7 6 5 28 28 H 0.97005 * 120.00161 * 359.71831 * 11 9 8 29 29 H 1.08996 * 109.47599 * 300.00068 * 14 12 11 30 30 H 1.09001 * 109.47077 * 60.00676 * 14 12 11 31 31 H 1.08999 * 109.47016 * 60.00053 * 15 14 12 32 32 H 1.08998 * 109.47401 * 180.02562 * 15 14 12 33 33 H 0.96694 * 114.00086 * 180.02562 * 18 16 15 34 34 H 1.08999 * 109.46985 * 60.00395 * 19 16 15 35 35 H 1.09005 * 109.47475 * 180.02562 * 19 16 15 36 36 H 1.09001 * 109.47659 * 299.99430 * 20 12 11 37 37 H 1.08995 * 109.47574 * 60.00208 * 20 12 11 38 38 H 1.08001 * 120.85218 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7274 -0.0454 -2.1453 6 7 3.1748 -0.6532 -3.2277 7 6 2.8929 -1.9134 -3.4843 8 6 2.0910 -2.6527 -2.6135 9 6 1.7696 -4.0661 -2.9048 10 8 1.0745 -4.7020 -2.1367 11 7 2.2475 -4.6495 -4.0218 12 6 1.9294 -6.0502 -4.3101 13 1 0.9208 -6.2729 -3.9619 14 6 2.0131 -6.2921 -5.8185 15 6 1.6816 -7.7551 -6.1196 16 6 2.6817 -8.6631 -5.4011 17 1 3.6903 -8.4400 -5.7494 18 8 2.3718 -10.0295 -5.6818 19 6 2.5980 -8.4211 -3.8927 20 6 2.9292 -6.9585 -3.5916 21 6 1.6014 -2.0354 -1.4565 22 1 -0.3933 0.4417 0.7650 23 1 1.7923 -0.5137 0.8900 24 1 3.5346 1.7703 0.0322 25 1 1.5616 2.4678 -1.2085 26 1 2.9863 0.9886 -1.9713 27 1 3.2819 -2.3778 -4.3784 28 1 2.7989 -4.1408 -4.6367 29 1 1.3009 -5.6450 -6.3304 30 1 3.0217 -6.0695 -6.1667 31 1 0.6731 -7.9782 -5.7713 32 1 1.7416 -7.9276 -7.1942 33 1 2.9665 -10.6629 -5.2574 34 1 1.5896 -8.6442 -3.5444 35 1 3.3109 -9.0676 -3.3809 36 1 3.9378 -6.7359 -3.9398 37 1 2.8695 -6.7862 -2.5170 38 1 0.9822 -2.5789 -0.7583 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_13287814.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:39 Heat of formation + Delta-G solvation = -88.328141 kcal Electronic energy + Delta-G solvation = -21560.777194 eV Core-core repulsion = 18176.184084 eV Total energy + Delta-G solvation = -3384.593110 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.130 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.08396 -40.85419 -39.54717 -37.87798 -37.08818 -34.84355 -33.98098 -33.18749 -31.92003 -29.53347 -27.35103 -25.91855 -23.98782 -23.83379 -23.06731 -21.66921 -21.01062 -19.14496 -18.61371 -18.28237 -18.19744 -18.08421 -17.03044 -16.55595 -16.34145 -15.87700 -15.54362 -15.43952 -15.24711 -14.91672 -14.64652 -14.48197 -14.33764 -14.18295 -13.83681 -13.39328 -13.29233 -13.06151 -12.66954 -12.51545 -12.22197 -12.17718 -11.80177 -11.55975 -11.32409 -11.20825 -10.87189 -10.79554 -10.64975 -10.26589 -10.17419 -4.97597 -0.74929 -0.16084 1.21660 1.52016 1.63637 1.82026 1.91644 2.46857 2.90952 3.15786 3.24394 3.39090 3.53932 3.55945 3.59321 3.66773 3.69202 3.95857 4.01266 4.06434 4.13858 4.17447 4.25577 4.35052 4.39746 4.42575 4.59683 4.69733 4.75963 4.84345 4.91365 4.97888 5.05696 5.08391 5.14684 5.19866 5.23899 5.37599 6.27571 6.45718 6.83759 6.85115 6.94763 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.081 4.081 3 Si 0.782 3.218 4 C -0.141 4.141 5 C 0.109 3.891 6 N -0.495 5.495 7 C 0.144 3.856 8 C -0.192 4.192 9 C 0.567 3.433 10 O -0.569 6.569 11 N -0.704 5.704 12 C 0.143 3.857 13 H 0.068 0.932 14 C -0.114 4.114 15 C -0.112 4.112 16 C 0.103 3.897 17 H 0.072 0.928 18 O -0.589 6.589 19 C -0.145 4.145 20 C -0.122 4.122 21 C 0.001 3.999 22 H 0.408 0.592 23 H 0.101 0.899 24 H -0.278 1.278 25 H -0.290 1.290 26 H 0.158 0.842 27 H 0.198 0.802 28 H 0.416 0.584 29 H 0.085 0.915 30 H 0.096 0.904 31 H 0.058 0.942 32 H 0.080 0.920 33 H 0.394 0.606 34 H 0.056 0.944 35 H 0.079 0.921 36 H 0.085 0.915 37 H 0.050 0.950 38 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.313 2.268 1.292 4.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.191 4.191 3 Si 0.686 3.314 4 C -0.143 4.143 5 C -0.047 4.047 6 N -0.203 5.203 7 C -0.015 4.015 8 C -0.197 4.197 9 C 0.354 3.646 10 O -0.449 6.449 11 N -0.355 5.355 12 C 0.039 3.961 13 H 0.086 0.914 14 C -0.152 4.152 15 C -0.150 4.150 16 C 0.044 3.956 17 H 0.090 0.910 18 O -0.398 6.398 19 C -0.183 4.183 20 C -0.161 4.161 21 C -0.025 4.025 22 H 0.260 0.740 23 H 0.118 0.882 24 H -0.205 1.205 25 H -0.218 1.218 26 H 0.175 0.825 27 H 0.215 0.785 28 H 0.255 0.745 29 H 0.103 0.897 30 H 0.114 0.886 31 H 0.077 0.923 32 H 0.098 0.902 33 H 0.244 0.756 34 H 0.075 0.925 35 H 0.098 0.902 36 H 0.104 0.896 37 H 0.069 0.931 38 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 3.436 2.826 -0.079 4.449 hybrid contribution -0.007 -1.111 0.663 1.294 sum 3.429 1.715 0.584 3.878 Atomic orbital electron populations 1.86435 1.16891 1.82618 1.51633 1.24857 0.86281 1.11814 0.96136 0.93848 0.77670 0.74593 0.85326 1.20716 1.00081 0.94906 0.98586 1.22877 0.93021 0.99647 0.89141 1.67733 1.22378 1.11145 1.19043 1.23513 0.91068 0.88887 0.98002 1.21089 1.04233 0.95494 0.98926 1.18094 0.79111 0.85832 0.81570 1.90798 1.39570 1.65548 1.49010 1.45834 1.53035 1.13281 1.23386 1.21088 0.99156 0.79423 0.96419 0.91410 1.21716 1.04624 0.96150 0.92718 1.21429 0.99057 0.93221 1.01337 1.21910 0.98662 0.81709 0.93274 0.90964 1.86482 1.60520 1.16820 1.75974 1.22180 1.02496 0.96504 0.97158 1.21798 0.99985 0.94153 1.00138 1.21697 0.92681 0.93335 0.94811 0.74047 0.88156 1.20493 1.21753 0.82502 0.78492 0.74524 0.89657 0.88598 0.92303 0.90181 0.75614 0.92512 0.90197 0.89634 0.93072 0.83610 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 0.48 12.75 -148.98 -1.90 -1.42 16 2 C -0.08 0.14 2.82 71.24 0.20 0.34 16 3 Si 0.78 -3.40 29.82 68.60 2.05 -1.36 16 4 C -0.14 -0.60 5.42 -19.81 -0.11 -0.71 16 5 C 0.11 0.56 9.84 84.69 0.83 1.40 16 6 N -0.50 -2.70 10.35 -194.75 -2.01 -4.71 16 7 C 0.14 0.14 10.71 85.04 0.91 1.05 16 8 C -0.19 -0.81 5.89 -19.99 -0.12 -0.93 16 9 C 0.57 3.17 7.75 86.79 0.67 3.85 16 10 O -0.57 -7.97 16.08 -3.87 -0.06 -8.03 16 11 N -0.70 1.22 5.03 -445.42 -2.24 -1.02 16 12 C 0.14 -0.11 2.46 44.99 0.11 0.00 16 13 H 0.07 0.34 7.57 -2.39 -0.02 0.32 16 14 C -0.11 0.61 5.39 30.59 0.16 0.78 16 15 C -0.11 0.20 5.57 30.60 0.17 0.37 16 16 C 0.10 -0.19 3.47 30.59 0.11 -0.08 16 17 H 0.07 -0.35 8.14 -2.38 -0.02 -0.37 16 18 O -0.59 -0.77 13.32 -148.98 -1.98 -2.75 16 19 C -0.14 0.19 5.54 30.58 0.17 0.36 16 20 C -0.12 0.13 5.49 30.58 0.17 0.29 16 21 C 0.00 0.01 9.31 22.73 0.21 0.22 16 22 H 0.41 -4.74 8.74 -74.06 -0.65 -5.39 16 23 H 0.10 -0.58 7.96 -2.39 -0.02 -0.60 16 24 H -0.28 -0.06 7.11 99.48 0.71 0.65 16 25 H -0.29 -0.85 7.11 99.48 0.71 -0.14 16 26 H 0.16 0.50 4.88 -2.91 -0.01 0.49 16 27 H 0.20 -1.52 6.42 -2.91 -0.02 -1.54 16 28 H 0.42 -3.57 6.67 -92.70 -0.62 -4.19 16 29 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 30 H 0.10 -0.90 8.14 -2.39 -0.02 -0.91 16 31 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 32 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 33 H 0.39 -2.53 9.08 -74.06 -0.67 -3.21 16 34 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 35 H 0.08 -0.27 8.14 -2.38 -0.02 -0.28 16 36 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 37 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 38 H 0.15 1.04 7.74 -2.91 -0.02 1.02 16 Total: 0.00 -23.79 313.58 -3.45 -27.25 By element: Atomic # 1 Polarization: -14.08 SS G_CDS: -0.79 Total: -14.88 kcal Atomic # 6 Polarization: 3.43 SS G_CDS: 3.49 Total: 6.93 kcal Atomic # 7 Polarization: -1.47 SS G_CDS: -4.26 Total: -5.73 kcal Atomic # 8 Polarization: -8.26 SS G_CDS: -3.95 Total: -12.21 kcal Atomic # 14 Polarization: -3.40 SS G_CDS: 2.05 Total: -1.36 kcal Total: -23.79 -3.45 -27.25 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13287814.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.082 kcal (2) G-P(sol) polarization free energy of solvation -23.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.454 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.246 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.328 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds