Wall clock time and date at job start Sat Mar 6 2021 15:00:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36419 * 125.79953 * 2 1 4 4 C 1.47377 * 127.19580 * 0.03123 * 3 2 1 5 5 O 1.21612 * 119.99874 * 0.02562 * 4 3 2 6 6 N 1.34770 * 120.00162 * 180.02562 * 4 3 2 7 7 C 1.46496 * 120.00196 * 179.97438 * 6 4 3 8 8 H 1.09004 * 109.47258 * 324.99869 * 7 6 4 9 9 C 1.53002 * 109.47402 * 84.99973 * 7 6 4 10 10 C 1.53000 * 109.47311 * 180.02562 * 9 7 6 11 11 C 1.52997 * 109.47102 * 300.00177 * 10 9 7 12 12 H 1.09006 * 109.47202 * 299.99701 * 11 10 9 13 13 O 1.42903 * 109.46699 * 180.02562 * 11 10 9 14 14 C 1.52992 * 109.47370 * 60.00110 * 11 10 9 15 15 C 1.53005 * 109.47296 * 205.00087 * 7 6 4 16 16 C 1.47023 * 105.61077 * 179.79565 * 3 2 1 17 17 C 1.34176 * 105.95581 * 0.38462 * 16 3 2 18 18 C 1.50700 * 125.43614 * 179.86551 * 17 16 3 19 19 O 1.42896 * 109.47341 * 299.72023 * 18 17 16 20 20 Si 1.86300 * 109.46849 * 179.71909 * 18 17 16 21 21 O 1.33647 * 125.80137 * 180.02562 * 2 1 3 22 22 H 1.08994 * 109.46961 * 179.97438 * 1 2 3 23 23 H 1.09001 * 109.46935 * 299.98883 * 1 2 3 24 24 H 1.09006 * 109.46829 * 59.98635 * 1 2 3 25 25 H 0.97010 * 120.00312 * 0.02562 * 6 4 3 26 26 H 1.08995 * 109.47056 * 300.00651 * 9 7 6 27 27 H 1.09008 * 109.46521 * 59.99776 * 9 7 6 28 28 H 1.08998 * 109.46699 * 179.97438 * 10 9 7 29 29 H 1.08997 * 109.46828 * 60.00351 * 10 9 7 30 30 H 0.96693 * 114.00298 * 60.00239 * 13 11 10 31 31 H 1.09001 * 109.47530 * 179.97438 * 14 11 10 32 32 H 1.09006 * 109.47292 * 59.99646 * 14 11 10 33 33 H 1.08997 * 109.47402 * 299.99830 * 15 7 6 34 34 H 1.09000 * 109.46860 * 59.99969 * 15 7 6 35 35 H 1.08000 * 127.02066 * 180.25640 * 16 3 2 36 36 H 1.09000 * 109.46989 * 59.72353 * 18 17 16 37 37 H 0.96693 * 114.00306 * 299.99773 * 19 18 17 38 38 H 1.48506 * 110.00048 * 58.68772 * 20 18 17 39 39 H 1.48502 * 109.99996 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8740 2.5158 0.0006 5 8 0.6890 2.7892 0.0017 6 7 2.7930 3.5015 0.0000 7 6 2.3646 4.9024 0.0001 8 1 1.4530 5.0037 -0.5889 9 6 2.0960 5.3536 1.4372 10 6 1.6479 6.8166 1.4372 11 6 2.7482 7.6869 0.8266 12 1 3.6599 7.5862 1.4155 13 8 2.3298 9.0533 0.8272 14 6 3.0167 7.2358 -0.6104 15 6 3.4653 5.7725 -0.6103 16 6 3.6849 0.5991 0.0051 17 6 3.5859 -0.7390 -0.0011 18 6 4.7459 -1.7010 -0.0020 19 8 5.5423 -1.4858 -1.1688 20 14 4.1026 -3.4494 -0.0029 21 8 2.2888 -1.0839 -0.0005 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3633 0.5137 0.8901 24 1 -0.3633 0.5141 -0.8899 25 1 3.7383 3.2835 -0.0012 26 1 1.3119 4.7338 1.8720 27 1 3.0076 5.2524 2.0261 28 1 1.4561 7.1377 2.4610 29 1 0.7362 6.9172 0.8484 30 1 2.1420 9.4068 1.7074 31 1 3.8003 7.8562 -1.0456 32 1 2.1050 7.3365 -1.1993 33 1 4.3769 5.6714 -0.0214 34 1 3.6566 5.4511 -1.6341 35 1 4.5928 1.1840 0.0103 36 1 5.3538 -1.5380 0.8880 37 1 5.0650 -1.6138 -1.9999 38 1 3.2463 -3.6750 -1.1951 39 1 5.2369 -4.4079 -0.0032 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13308374.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:43 Heat of formation + Delta-G solvation = -113.253209 kcal Electronic energy + Delta-G solvation = -22444.968830 eV Core-core repulsion = 18934.264747 eV Total energy + Delta-G solvation = -3510.704083 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.135 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -43.75030 -40.95288 -39.45049 -38.23184 -36.96372 -34.61709 -33.92124 -33.11125 -31.93536 -29.90826 -29.02790 -25.88981 -24.44085 -23.92817 -23.09293 -21.80373 -21.35747 -20.41249 -19.01982 -18.24360 -17.95097 -17.71330 -17.37609 -16.74862 -16.27602 -16.03545 -15.85421 -15.58759 -15.46363 -14.76094 -14.68313 -14.31536 -14.19470 -14.07546 -13.95055 -13.85012 -13.38688 -13.29944 -13.03749 -12.98190 -12.87015 -12.46356 -12.23784 -12.11952 -11.79568 -11.34510 -11.08865 -10.91261 -10.79184 -10.72793 -10.06773 -9.56636 -5.03152 0.30340 0.81816 1.09191 1.40633 1.66338 1.87626 2.14479 2.37110 3.05453 3.16168 3.32407 3.53027 3.65224 3.75409 3.76144 3.96524 4.07738 4.10773 4.13677 4.22824 4.24467 4.33732 4.37147 4.41424 4.57629 4.59156 4.63458 4.74444 4.78454 4.92014 4.97342 5.03262 5.06621 5.08582 5.18791 5.20722 5.29203 5.49104 5.88630 6.16925 6.51119 6.67337 7.25425 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.095 3.905 3 C -0.254 4.254 4 C 0.593 3.407 5 O -0.538 6.538 6 N -0.722 5.722 7 C 0.145 3.855 8 H 0.092 0.908 9 C -0.127 4.127 10 C -0.149 4.149 11 C 0.103 3.897 12 H 0.056 0.944 13 O -0.568 6.568 14 C -0.110 4.110 15 C -0.124 4.124 16 C -0.148 4.148 17 C -0.055 4.055 18 C -0.034 4.034 19 O -0.521 6.521 20 Si 0.702 3.298 21 O -0.167 6.167 22 H 0.080 0.920 23 H 0.099 0.901 24 H 0.098 0.902 25 H 0.400 0.600 26 H 0.073 0.927 27 H 0.066 0.934 28 H 0.069 0.931 29 H 0.074 0.926 30 H 0.380 0.620 31 H 0.076 0.924 32 H 0.074 0.926 33 H 0.071 0.929 34 H 0.077 0.923 35 H 0.158 0.842 36 H 0.137 0.863 37 H 0.381 0.619 38 H -0.256 1.256 39 H -0.248 1.248 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.481 -1.288 2.466 3.151 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.041 3.959 3 C -0.259 4.259 4 C 0.381 3.619 5 O -0.416 6.416 6 N -0.372 5.372 7 C 0.040 3.960 8 H 0.110 0.890 9 C -0.165 4.165 10 C -0.188 4.188 11 C 0.044 3.956 12 H 0.074 0.926 13 O -0.374 6.374 14 C -0.148 4.148 15 C -0.162 4.162 16 C -0.168 4.168 17 C -0.103 4.103 18 C -0.144 4.144 19 O -0.328 6.328 20 Si 0.601 3.399 21 O -0.064 6.064 22 H 0.099 0.901 23 H 0.118 0.882 24 H 0.116 0.884 25 H 0.235 0.765 26 H 0.091 0.909 27 H 0.084 0.916 28 H 0.088 0.912 29 H 0.093 0.907 30 H 0.227 0.773 31 H 0.095 0.905 32 H 0.093 0.907 33 H 0.090 0.910 34 H 0.096 0.904 35 H 0.175 0.825 36 H 0.155 0.845 37 H 0.229 0.771 38 H -0.180 1.180 39 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges 1.061 -2.109 1.824 2.983 hybrid contribution 0.762 0.681 -0.383 1.091 sum 1.823 -1.427 1.441 2.727 Atomic orbital electron populations 1.20562 0.83272 1.04062 1.05470 1.22915 0.94087 0.82872 0.95979 1.21145 0.93227 0.93837 1.17647 1.17166 0.85449 0.83677 0.75575 1.90800 1.16487 1.84071 1.50263 1.45835 1.09734 1.05785 1.75870 1.21043 0.98745 0.79312 0.96851 0.88982 1.21865 1.02164 0.95889 0.96620 1.22234 0.99847 0.94955 1.01734 1.21849 0.95597 0.81251 0.96907 0.92625 1.86516 1.90117 1.26198 1.34555 1.21409 1.02913 0.94726 0.95710 1.21780 0.98105 0.94324 1.01998 1.22577 0.96460 0.93497 1.04230 1.22553 0.82931 0.95564 1.09276 1.24337 0.90285 1.07669 0.92070 1.86658 1.38701 1.91721 1.15670 0.94370 0.81859 0.73690 0.90006 1.83681 1.16360 1.34993 1.71394 0.90120 0.88231 0.88365 0.76533 0.90864 0.91571 0.91247 0.90680 0.77298 0.90499 0.90698 0.91007 0.90400 0.82466 0.84522 0.77065 1.18007 1.17261 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.03 9.14 36.01 0.33 0.35 16 2 C 0.09 0.13 7.37 -34.96 -0.26 -0.12 16 3 C -0.25 -0.44 6.31 -103.27 -0.65 -1.09 16 4 C 0.59 1.55 7.78 -12.54 -0.10 1.45 16 5 O -0.54 -2.89 15.32 5.27 0.08 -2.81 16 6 N -0.72 0.01 5.07 -54.90 -0.28 -0.27 16 7 C 0.14 -0.01 2.45 -67.93 -0.17 -0.18 16 8 H 0.09 0.17 7.58 -51.93 -0.39 -0.22 16 9 C -0.13 0.03 5.49 -26.73 -0.15 -0.12 16 10 C -0.15 0.09 5.54 -26.73 -0.15 -0.06 16 11 C 0.10 -0.04 3.47 -26.74 -0.09 -0.14 16 12 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 13 O -0.57 -0.49 13.32 -35.23 -0.47 -0.96 16 14 C -0.11 0.05 5.58 -26.71 -0.15 -0.10 16 15 C -0.12 0.21 5.40 -26.70 -0.14 0.06 16 16 C -0.15 -0.02 10.46 -37.45 -0.39 -0.42 16 17 C -0.06 -0.01 6.20 -35.74 -0.22 -0.23 16 18 C -0.03 0.04 2.97 36.01 0.11 0.15 16 19 O -0.52 0.14 12.87 -35.23 -0.45 -0.31 16 20 Si 0.70 -0.98 32.08 -169.99 -5.45 -6.43 16 21 O -0.17 -0.16 8.89 7.67 0.07 -0.10 16 22 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 23 H 0.10 -0.02 8.08 -51.93 -0.42 -0.44 16 24 H 0.10 0.00 8.08 -51.93 -0.42 -0.42 16 25 H 0.40 -0.86 7.77 -40.82 -0.32 -1.18 16 26 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 27 H 0.07 -0.06 8.14 -51.92 -0.42 -0.48 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 30 H 0.38 -1.12 9.08 45.56 0.41 -0.71 16 31 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 35 H 0.16 -0.28 7.74 -52.49 -0.41 -0.69 16 36 H 0.14 -0.39 7.96 -51.93 -0.41 -0.80 16 37 H 0.38 -1.08 8.70 45.56 0.40 -0.68 16 38 H -0.26 -0.35 7.11 56.52 0.40 0.06 16 39 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 LS Contribution 326.36 15.07 4.92 4.92 Total: 0.00 -7.54 326.36 -8.60 -16.15 By element: Atomic # 1 Polarization: -4.76 SS G_CDS: -4.98 Total: -9.75 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -2.03 Total: -0.43 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -0.28 Total: -0.27 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -0.77 Total: -4.18 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.45 Total: -6.43 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -7.54 -8.60 -16.15 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13308374.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.106 kcal (2) G-P(sol) polarization free energy of solvation -7.542 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.605 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.147 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.253 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds