Wall clock time and date at job start Sat Mar 6 2021 15:00:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86296 * 109.47260 * 2 1 4 4 C 1.50704 * 109.47260 * 120.00187 * 2 1 3 5 5 C 1.33741 * 125.12061 * 64.96698 * 4 2 1 6 6 C 1.37793 * 115.08153 * 179.73303 * 5 4 2 7 7 C 1.34985 * 114.70220 * 0.50420 * 6 5 4 8 8 C 1.47551 * 125.27803 * 179.79246 * 7 6 5 9 9 C 1.39824 * 120.00091 * 179.72126 * 8 7 6 10 10 C 1.36562 * 120.00533 * 179.97438 * 9 8 7 11 11 C 1.39839 * 119.99519 * 0.02562 * 10 9 8 12 12 C 1.47559 * 119.99589 * 180.02562 * 11 10 9 13 13 O 1.21590 * 120.00678 * 359.97438 * 12 11 10 14 14 N 1.34782 * 119.99367 * 180.02562 * 12 11 10 15 15 C 1.46500 * 119.99474 * 179.97438 * 14 12 11 16 16 H 1.08996 * 109.47738 * 34.99759 * 15 14 12 17 17 C 1.53002 * 109.47089 * 154.99416 * 15 14 12 18 18 C 1.52997 * 109.47415 * 179.97438 * 17 15 14 19 19 C 1.53006 * 109.47164 * 300.00027 * 18 17 15 20 20 H 1.09000 * 109.47050 * 300.00004 * 19 18 17 21 21 O 1.42895 * 109.47000 * 179.97438 * 19 18 17 22 22 C 1.52999 * 109.46626 * 59.99702 * 19 18 17 23 23 C 1.52996 * 109.47249 * 274.99290 * 15 14 12 24 24 C 1.39825 * 119.99968 * 0.27258 * 11 10 9 25 25 C 1.36570 * 119.99697 * 359.39750 * 24 11 10 26 26 S 1.75861 * 125.11688 * 244.97549 * 4 2 1 27 27 H 0.96701 * 113.99852 * 300.00017 * 1 2 3 28 28 H 1.09000 * 109.47158 * 239.99613 * 2 1 3 29 29 H 1.48502 * 109.99893 * 178.68343 * 3 2 1 30 30 H 1.48500 * 109.99865 * 300.00013 * 3 2 1 31 31 H 1.08004 * 122.45768 * 359.97438 * 5 4 2 32 32 H 1.08006 * 122.65443 * 180.29795 * 6 5 4 33 33 H 1.08000 * 119.99948 * 0.02562 * 9 8 7 34 34 H 1.08001 * 120.00386 * 179.97438 * 10 9 8 35 35 H 0.96992 * 120.00293 * 359.97438 * 14 12 11 36 36 H 1.09000 * 109.46986 * 59.99786 * 17 15 14 37 37 H 1.09001 * 109.47601 * 300.00509 * 17 15 14 38 38 H 1.09001 * 109.46922 * 180.02562 * 18 17 15 39 39 H 1.09000 * 109.47140 * 59.99976 * 18 17 15 40 40 H 0.96708 * 113.99472 * 179.97438 * 21 19 18 41 41 H 1.09000 * 109.47160 * 60.00369 * 22 19 18 42 42 H 1.09002 * 109.46719 * 180.02562 * 22 19 18 43 43 H 1.09000 * 109.47054 * 300.00354 * 23 15 14 44 44 H 1.09001 * 109.46997 * 60.00087 * 23 15 14 45 45 H 1.07997 * 120.00544 * 179.72414 * 24 11 10 46 46 H 1.07998 * 119.99791 * 180.31465 * 25 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 1.7514 -2.0087 1.4967 6 6 2.3045 -2.4442 2.6812 7 6 2.9343 -1.4872 3.3952 8 6 3.6018 -1.6940 4.6947 9 6 4.2276 -0.6217 5.3377 10 6 4.8450 -0.8128 6.5407 11 6 4.8518 -2.0813 7.1292 12 6 5.5184 -2.2878 8.4294 13 8 6.0622 -1.3552 8.9888 14 7 5.5254 -3.5106 8.9963 15 6 6.1877 -3.7157 10.2869 16 1 6.0629 -2.8266 10.9048 17 6 5.5637 -4.9202 10.9946 18 6 6.2558 -5.1349 12.3421 19 6 7.7466 -5.3932 12.1144 20 1 7.8710 -6.2823 11.4963 21 8 8.3931 -5.5931 13.3730 22 6 8.3705 -4.1887 11.4067 23 6 7.6786 -3.9737 10.0597 24 6 4.2314 -3.1551 6.4833 25 6 3.6082 -2.9623 5.2834 26 16 2.8423 0.0429 2.5325 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5139 -0.8899 29 1 3.5346 1.7702 0.0321 30 1 1.5615 2.4678 -1.2085 31 1 1.2155 -2.6682 0.8302 32 1 2.2366 -3.4695 3.0139 33 1 4.2220 0.3581 4.8834 34 1 5.3287 0.0154 7.0372 35 1 5.0920 -4.2546 8.5500 36 1 5.6885 -5.8094 10.3767 37 1 4.5016 -4.7365 11.1564 38 1 5.8115 -5.9932 12.8460 39 1 6.1314 -4.2457 12.9602 40 1 9.3426 -5.7630 13.3047 41 1 8.2461 -3.2995 12.0248 42 1 9.4325 -4.3729 11.2440 43 1 7.8034 -4.8630 9.4418 44 1 8.1231 -3.1157 9.5555 45 1 4.2405 -4.1357 6.9356 46 1 3.1246 -3.7905 4.7869 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_13308390.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:45 Heat of formation + Delta-G solvation = -64.924842 kcal Electronic energy + Delta-G solvation = -28136.924790 eV Core-core repulsion = 24083.944881 eV Total energy + Delta-G solvation = -4052.979910 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.123 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.56431 -40.31613 -39.51370 -38.93274 -37.38744 -37.01206 -34.73502 -33.41396 -32.26853 -31.89468 -30.64357 -29.30482 -27.11173 -24.83273 -24.04954 -23.84989 -23.56858 -22.85616 -21.59148 -21.03948 -20.25419 -19.23326 -18.60077 -18.20463 -17.74346 -17.34449 -16.74277 -16.47043 -16.22833 -16.18457 -16.04744 -15.71342 -15.55215 -15.43150 -14.99733 -14.81854 -14.52504 -14.45090 -14.32838 -14.16340 -13.90658 -13.61347 -13.37750 -13.31631 -13.27666 -13.08339 -12.99298 -12.57957 -12.46390 -12.29994 -12.19594 -12.07159 -11.76344 -11.58842 -11.31136 -11.12736 -10.80744 -10.76548 -10.55906 -10.19110 -10.16220 -9.54501 -9.03658 -5.17699 -0.89200 0.25216 0.33964 0.38702 0.76075 1.21420 1.51621 1.59165 1.84121 1.95887 2.01108 2.82853 3.25992 3.39801 3.44956 3.56445 3.67512 3.69607 3.72859 3.75451 3.84531 4.00886 4.09372 4.19470 4.20711 4.28301 4.31240 4.37415 4.39203 4.42127 4.45657 4.55664 4.61812 4.64359 4.87079 4.91908 4.93600 5.00176 5.01378 5.07965 5.10495 5.11017 5.21023 5.24614 5.28257 5.30411 5.32512 5.43937 5.48113 5.73340 6.44920 6.65580 6.85951 7.12062 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.025 4.025 3 Si 0.718 3.282 4 C -0.222 4.222 5 C -0.111 4.111 6 C -0.116 4.116 7 C -0.159 4.159 8 C 0.007 3.993 9 C -0.129 4.129 10 C -0.065 4.065 11 C -0.151 4.151 12 C 0.557 3.443 13 O -0.581 6.581 14 N -0.707 5.707 15 C 0.143 3.857 16 H 0.064 0.936 17 C -0.113 4.113 18 C -0.113 4.113 19 C 0.103 3.897 20 H 0.073 0.927 21 O -0.590 6.590 22 C -0.145 4.145 23 C -0.122 4.122 24 C -0.067 4.067 25 C -0.109 4.109 26 S 0.123 5.877 27 H 0.396 0.604 28 H 0.123 0.877 29 H -0.270 1.270 30 H -0.269 1.269 31 H 0.154 0.846 32 H 0.167 0.833 33 H 0.134 0.866 34 H 0.128 0.872 35 H 0.416 0.584 36 H 0.095 0.905 37 H 0.085 0.915 38 H 0.080 0.920 39 H 0.057 0.943 40 H 0.394 0.606 41 H 0.055 0.945 42 H 0.078 0.922 43 H 0.085 0.915 44 H 0.048 0.952 45 H 0.164 0.836 46 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.294 -5.450 -1.280 6.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.138 4.138 3 Si 0.622 3.378 4 C -0.340 4.340 5 C -0.141 4.141 6 C -0.147 4.147 7 C -0.276 4.276 8 C 0.004 3.996 9 C -0.147 4.147 10 C -0.084 4.084 11 C -0.154 4.154 12 C 0.346 3.654 13 O -0.462 6.462 14 N -0.358 5.358 15 C 0.039 3.961 16 H 0.082 0.918 17 C -0.151 4.151 18 C -0.151 4.151 19 C 0.045 3.955 20 H 0.091 0.909 21 O -0.398 6.398 22 C -0.184 4.184 23 C -0.161 4.161 24 C -0.085 4.085 25 C -0.128 4.128 26 S 0.390 5.610 27 H 0.247 0.753 28 H 0.141 0.859 29 H -0.196 1.196 30 H -0.194 1.194 31 H 0.171 0.829 32 H 0.184 0.816 33 H 0.152 0.848 34 H 0.146 0.854 35 H 0.255 0.745 36 H 0.114 0.886 37 H 0.104 0.896 38 H 0.099 0.901 39 H 0.076 0.924 40 H 0.243 0.757 41 H 0.074 0.926 42 H 0.097 0.903 43 H 0.103 0.897 44 H 0.067 0.933 45 H 0.182 0.818 46 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -1.438 -2.915 -1.376 3.530 hybrid contribution 0.254 -1.726 -0.805 1.921 sum -1.184 -4.641 -2.182 5.263 Atomic orbital electron populations 1.86495 1.16566 1.82054 1.50393 1.24404 0.85265 1.09009 0.95117 0.94200 0.79446 0.76314 0.87861 1.25163 1.07969 0.98879 1.01949 1.20198 1.01028 0.94813 0.98047 1.20636 0.98426 1.01274 0.94353 1.23173 1.07615 0.97563 0.99278 1.18462 0.95471 0.94545 0.91079 1.21030 0.99010 0.99172 0.95531 1.20944 0.96233 0.96730 0.94451 1.20027 1.04024 0.95787 0.95593 1.18509 0.78947 0.82843 0.85142 1.90785 1.47325 1.42988 1.65116 1.45839 1.56980 1.10586 1.22439 1.21031 0.92065 0.99189 0.83858 0.91784 1.21703 1.00378 0.97349 0.95627 1.21435 0.93498 1.02752 0.97382 1.21911 0.92751 0.96458 0.84393 0.90933 1.86485 1.27703 1.94466 1.31149 1.22181 1.00680 0.99297 0.96233 1.21792 0.94596 1.02221 0.97446 1.21269 0.94131 0.98681 0.94445 1.21206 0.99674 0.96384 0.95562 1.84142 1.53164 1.10894 1.12787 0.75348 0.85940 1.19567 1.19419 0.82870 0.81557 0.84825 0.85445 0.74512 0.88627 0.89612 0.90137 0.92398 0.75652 0.92635 0.90312 0.89686 0.93318 0.81845 0.82135 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.63 12.88 -148.98 -1.92 -1.28 16 2 C -0.02 0.04 2.96 71.24 0.21 0.25 16 3 Si 0.72 -1.04 30.97 68.60 2.12 1.09 16 4 C -0.22 0.20 5.71 24.67 0.14 0.34 16 5 C -0.11 0.17 10.03 21.14 0.21 0.38 16 6 C -0.12 0.30 9.64 21.42 0.21 0.51 16 7 C -0.16 0.06 6.37 23.98 0.15 0.21 16 8 C 0.01 0.00 5.88 -20.05 -0.12 -0.12 16 9 C -0.13 -0.21 9.54 22.26 0.21 0.00 16 10 C -0.06 -0.25 9.53 22.27 0.21 -0.04 16 11 C -0.15 -0.29 5.88 -20.05 -0.12 -0.41 16 12 C 0.56 2.94 7.73 86.70 0.67 3.61 16 13 O -0.58 -8.43 15.99 -4.00 -0.06 -8.49 16 14 N -0.71 1.42 5.03 -445.67 -2.24 -0.82 16 15 C 0.14 -0.09 2.45 44.99 0.11 0.02 16 16 H 0.06 0.36 7.58 -2.39 -0.02 0.34 16 17 C -0.11 0.64 5.39 30.59 0.16 0.80 16 18 C -0.11 0.21 5.57 30.60 0.17 0.38 16 19 C 0.10 -0.19 3.47 30.60 0.11 -0.08 16 20 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 21 O -0.59 -0.79 13.32 -148.98 -1.98 -2.78 16 22 C -0.15 0.13 5.54 30.58 0.17 0.30 16 23 C -0.12 0.07 5.49 30.58 0.17 0.24 16 24 C -0.07 0.31 9.48 22.26 0.21 0.53 16 25 C -0.11 0.48 9.48 22.26 0.21 0.69 16 26 S 0.12 -0.07 19.48 -56.49 -1.10 -1.17 16 27 H 0.40 -3.43 8.70 -74.06 -0.64 -4.07 16 28 H 0.12 -0.17 7.96 -2.39 -0.02 -0.19 16 29 H -0.27 -0.98 7.11 99.48 0.71 -0.27 16 30 H -0.27 -1.19 7.11 99.48 0.71 -0.48 16 31 H 0.15 -0.53 8.06 -2.91 -0.02 -0.55 16 32 H 0.17 -1.29 6.88 -2.91 -0.02 -1.31 16 33 H 0.13 -0.02 7.26 -2.91 -0.02 -0.04 16 34 H 0.13 0.74 7.64 -2.91 -0.02 0.72 16 35 H 0.42 -3.84 6.61 -92.71 -0.61 -4.46 16 36 H 0.10 -0.93 8.14 -2.39 -0.02 -0.95 16 37 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 38 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 39 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 40 H 0.39 -2.49 9.08 -74.05 -0.67 -3.16 16 41 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 42 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 43 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 44 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 45 H 0.16 -2.01 6.38 -2.91 -0.02 -2.03 16 46 H 0.16 -1.61 6.74 -2.91 -0.02 -1.62 16 Total: 0.00 -22.33 388.19 -2.94 -25.28 By element: Atomic # 1 Polarization: -18.57 SS G_CDS: -0.85 Total: -19.42 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: 3.09 Total: 7.60 kcal Atomic # 7 Polarization: 1.42 SS G_CDS: -2.24 Total: -0.82 kcal Atomic # 8 Polarization: -8.59 SS G_CDS: -3.97 Total: -12.55 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: 2.12 Total: 1.09 kcal Atomic # 16 Polarization: -0.07 SS G_CDS: -1.10 Total: -1.17 kcal Total: -22.33 -2.94 -25.28 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13308390.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.648 kcal (2) G-P(sol) polarization free energy of solvation -22.335 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.982 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.277 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.925 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds