Wall clock time and date at job start Sat Mar 6 2021 15:00:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37787 * 119.85353 * 2 1 4 4 C 1.39710 * 119.90746 * 180.02562 * 3 2 1 5 5 C 1.47532 * 120.18856 * 179.97438 * 4 3 2 6 6 O 1.21594 * 120.00112 * 180.02562 * 5 4 3 7 7 N 1.34779 * 120.00307 * 0.02562 * 5 4 3 8 8 C 1.46496 * 120.00124 * 180.02562 * 7 5 4 9 9 H 1.09003 * 109.47283 * 324.99862 * 8 7 5 10 10 C 1.52993 * 109.47233 * 85.00172 * 8 7 5 11 11 C 1.53001 * 109.47262 * 180.02562 * 10 8 7 12 12 C 1.52999 * 109.46863 * 299.99639 * 11 10 8 13 13 H 1.09003 * 109.47080 * 300.00158 * 12 11 10 14 14 O 1.42900 * 109.47233 * 180.02562 * 12 11 10 15 15 C 1.52999 * 109.47078 * 59.99890 * 12 11 10 16 16 C 1.52994 * 109.47508 * 300.00276 * 15 12 11 17 17 C 1.40131 * 119.61655 * 359.97438 * 4 3 2 18 18 O 1.35655 * 120.14791 * 179.97438 * 17 4 3 19 19 C 1.38712 * 119.70464 * 0.25389 * 17 4 3 20 20 C 1.50698 * 119.96267 * 179.74543 * 19 17 4 21 21 O 1.42904 * 109.47024 * 285.00483 * 20 19 17 22 22 Si 1.86295 * 109.47452 * 164.99901 * 20 19 17 23 23 C 1.38057 * 120.07917 * 359.49484 * 19 17 4 24 24 H 1.09009 * 109.46384 * 90.00251 * 1 2 3 25 25 H 1.08991 * 109.47624 * 210.00225 * 1 2 3 26 26 H 1.09004 * 109.46804 * 330.00833 * 1 2 3 27 27 H 1.07994 * 120.04310 * 359.97438 * 3 2 1 28 28 H 0.96999 * 119.99586 * 0.02562 * 7 5 4 29 29 H 1.09005 * 109.47002 * 300.00103 * 10 8 7 30 30 H 1.09003 * 109.47239 * 59.99663 * 10 8 7 31 31 H 1.09004 * 109.47203 * 180.02562 * 11 10 8 32 32 H 1.08994 * 109.47445 * 59.99898 * 11 10 8 33 33 H 0.96697 * 114.00000 * 60.00293 * 14 12 11 34 34 H 1.09005 * 109.47193 * 179.97438 * 15 12 11 35 35 H 1.09003 * 109.46947 * 60.00186 * 15 12 11 36 36 H 1.09003 * 109.46943 * 299.99912 * 16 15 12 37 37 H 1.09002 * 109.47742 * 180.02562 * 16 15 12 38 38 H 0.96700 * 114.00230 * 90.00109 * 18 17 4 39 39 H 1.09003 * 109.46730 * 44.99606 * 20 19 17 40 40 H 0.96702 * 113.99808 * 180.02562 * 21 20 19 41 41 H 1.48501 * 110.00034 * 298.68849 * 22 20 19 42 42 H 1.48503 * 109.99612 * 59.99892 * 22 20 19 43 43 H 1.07997 * 119.80371 * 180.23799 * 23 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1929 1.1950 0.0000 4 6 3.5900 1.1963 -0.0005 5 6 4.3307 2.4723 -0.0011 6 8 5.5466 2.4694 -0.0021 7 7 3.6596 3.6411 -0.0006 8 6 4.3951 4.9081 -0.0017 9 1 5.3062 4.7998 0.5867 10 6 4.7581 5.2857 -1.4392 11 6 5.5268 6.6086 -1.4403 12 6 4.6534 7.7064 -0.8297 13 1 3.7423 7.8151 -1.4181 14 8 5.3711 8.9421 -0.8313 15 6 4.2903 7.3288 0.6077 16 6 3.5217 6.0059 0.6089 17 6 4.2837 -0.0212 -0.0005 18 8 5.6402 -0.0325 -0.0016 19 6 3.5770 -1.2149 -0.0053 20 6 4.3171 -2.5276 -0.0112 21 8 4.8544 -2.7657 -1.3138 22 14 3.1445 -3.9037 0.4381 23 6 2.1966 -1.2018 0.0004 24 1 -0.3632 0.0000 -1.0278 25 1 -0.3634 -0.8899 0.5138 26 1 -0.3633 0.8901 0.5137 27 1 1.6512 2.1293 -0.0004 28 1 2.6896 3.6434 0.0005 29 1 5.3807 4.5037 -1.8741 30 1 3.8470 5.3940 -2.0276 31 1 5.7851 6.8779 -2.4645 32 1 6.4380 6.4999 -0.8521 33 1 5.6338 9.2433 -1.7119 34 1 3.6684 8.1111 1.0429 35 1 5.2014 7.2201 1.1961 36 1 2.6105 6.1146 0.0206 37 1 3.2626 5.7370 1.6330 38 1 6.0342 -0.0354 0.8815 39 1 5.1289 -2.4902 0.7154 40 1 5.3447 -3.5956 -1.3913 41 1 2.6031 -3.6843 1.8034 42 1 2.0331 -3.9650 -0.5450 43 1 1.6509 -2.1338 0.0006 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13422088.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:54 Heat of formation + Delta-G solvation = -139.191746 kcal Electronic energy + Delta-G solvation = -25940.219341 eV Core-core repulsion = 22144.626719 eV Total energy + Delta-G solvation = -3795.592622 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.78456 -40.59660 -39.31842 -38.04976 -37.56117 -36.88007 -34.58214 -33.25060 -32.82006 -31.93967 -29.37825 -27.69563 -26.79676 -25.22398 -23.93446 -23.00868 -21.88528 -21.41398 -20.90329 -19.53280 -18.43154 -18.36995 -18.18300 -17.85020 -16.81789 -16.76980 -16.28346 -15.95918 -15.69422 -15.54980 -15.30650 -14.97411 -14.85986 -14.70640 -14.61557 -14.32152 -14.16140 -13.76532 -13.38909 -13.30268 -13.23832 -13.06334 -13.00428 -12.74154 -12.48516 -12.41522 -12.23896 -11.99251 -11.80858 -11.65628 -11.34568 -10.85491 -10.71693 -10.30231 -10.22104 -10.02829 -9.56342 -5.05903 -0.37511 0.01571 1.18599 1.54713 1.74905 1.86027 2.03194 2.55331 3.10879 3.15273 3.28162 3.47381 3.53865 3.58375 3.64963 3.78995 3.94627 3.95524 4.02715 4.08591 4.12968 4.19715 4.22727 4.31815 4.34205 4.38822 4.49417 4.53078 4.58820 4.65399 4.77183 4.87445 4.89630 4.91185 4.96152 5.03434 5.06880 5.12087 5.21049 5.25298 5.28493 5.45705 5.52736 6.44665 6.63642 6.67270 6.74236 7.22785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.164 4.164 5 C 0.561 3.439 6 O -0.515 6.515 7 N -0.726 5.726 8 C 0.145 3.855 9 H 0.092 0.908 10 C -0.128 4.128 11 C -0.149 4.149 12 C 0.103 3.897 13 H 0.056 0.944 14 O -0.568 6.568 15 C -0.109 4.109 16 C -0.124 4.124 17 C 0.192 3.808 18 O -0.465 6.465 19 C -0.108 4.108 20 C -0.063 4.063 21 O -0.538 6.538 22 Si 0.685 3.315 23 C -0.082 4.082 24 H 0.077 0.923 25 H 0.069 0.931 26 H 0.073 0.927 27 H 0.133 0.867 28 H 0.398 0.602 29 H 0.073 0.927 30 H 0.066 0.934 31 H 0.069 0.931 32 H 0.075 0.925 33 H 0.380 0.620 34 H 0.077 0.923 35 H 0.074 0.926 36 H 0.071 0.929 37 H 0.078 0.922 38 H 0.393 0.607 39 H 0.072 0.928 40 H 0.382 0.618 41 H -0.253 1.253 42 H -0.249 1.249 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.937 -2.326 1.498 4.811 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.167 4.167 5 C 0.348 3.652 6 O -0.391 6.391 7 N -0.378 5.378 8 C 0.041 3.959 9 H 0.110 0.890 10 C -0.166 4.166 11 C -0.188 4.188 12 C 0.044 3.956 13 H 0.074 0.926 14 O -0.374 6.374 15 C -0.147 4.147 16 C -0.162 4.162 17 C 0.145 3.855 18 O -0.275 6.275 19 C -0.108 4.108 20 C -0.174 4.174 21 O -0.344 6.344 22 Si 0.586 3.414 23 C -0.100 4.100 24 H 0.095 0.905 25 H 0.088 0.912 26 H 0.092 0.908 27 H 0.151 0.849 28 H 0.233 0.767 29 H 0.092 0.908 30 H 0.084 0.916 31 H 0.088 0.912 32 H 0.093 0.907 33 H 0.227 0.773 34 H 0.095 0.905 35 H 0.093 0.907 36 H 0.090 0.910 37 H 0.096 0.904 38 H 0.251 0.749 39 H 0.090 0.910 40 H 0.229 0.771 41 H -0.178 1.178 42 H -0.174 1.174 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -4.297 -2.010 1.663 5.026 hybrid contribution -0.194 0.554 -0.237 0.633 sum -4.491 -1.456 1.425 4.932 Atomic orbital electron populations 1.20836 0.89957 1.03429 1.03079 1.19770 0.96819 0.92176 1.00954 1.21115 0.92173 0.98185 0.97107 1.20387 0.93920 0.93515 1.08912 1.17986 0.87315 0.83251 0.76599 1.90837 1.12908 1.87226 1.48101 1.45976 1.10193 1.05442 1.76223 1.21041 0.96053 0.81931 0.96905 0.88955 1.21870 1.00806 0.97381 0.96589 1.22235 0.99833 0.94923 1.01775 1.21849 0.93502 0.83367 0.96881 0.92632 1.86514 1.77162 1.39147 1.34561 1.21397 1.01274 0.96343 0.95735 1.21770 0.98643 0.93821 1.01949 1.18190 0.83942 0.89586 0.93752 1.84808 1.13975 1.95859 1.32903 1.19717 0.93288 0.93854 1.03980 1.24521 1.03479 1.00069 0.89298 1.86553 1.74438 1.45240 1.28191 0.95114 0.80405 0.86048 0.79875 1.21014 0.93004 0.98141 0.97824 0.90483 0.91207 0.90836 0.84944 0.76686 0.90810 0.91573 0.91223 0.90658 0.77274 0.90475 0.90685 0.91026 0.90383 0.74863 0.90980 0.77101 1.17787 1.17386 0.85319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.22 10.00 36.01 0.36 0.58 16 2 C -0.10 -0.05 5.87 -104.67 -0.61 -0.66 16 3 C -0.07 -0.01 9.18 -39.20 -0.36 -0.37 16 4 C -0.16 -0.44 5.89 -104.85 -0.62 -1.05 16 5 C 0.56 1.92 7.73 -12.47 -0.10 1.82 16 6 O -0.52 -3.53 14.82 -16.60 -0.25 -3.77 16 7 N -0.73 -0.13 5.03 -54.85 -0.28 -0.41 16 8 C 0.14 0.03 2.45 -67.94 -0.17 -0.14 16 9 H 0.09 0.21 7.58 -51.93 -0.39 -0.19 16 10 C -0.13 -0.06 5.49 -26.73 -0.15 -0.20 16 11 C -0.15 0.01 5.55 -26.73 -0.15 -0.14 16 12 C 0.10 -0.02 3.47 -26.73 -0.09 -0.11 16 13 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 14 O -0.57 -0.61 13.32 -35.23 -0.47 -1.08 16 15 C -0.11 0.05 5.57 -26.73 -0.15 -0.10 16 16 C -0.12 0.21 5.39 -26.73 -0.14 0.07 16 17 C 0.19 0.71 6.69 -38.70 -0.26 0.45 16 18 O -0.46 -1.91 10.91 -40.54 -0.44 -2.35 16 19 C -0.11 -0.29 5.30 -104.51 -0.55 -0.84 16 20 C -0.06 -0.03 2.37 36.00 0.09 0.05 16 21 O -0.54 -0.86 12.86 -35.23 -0.45 -1.32 16 22 Si 0.68 -0.89 30.18 -169.99 -5.13 -6.02 16 23 C -0.08 -0.15 8.30 -39.53 -0.33 -0.48 16 24 H 0.08 -0.17 8.14 -51.92 -0.42 -0.60 16 25 H 0.07 -0.15 8.08 -51.93 -0.42 -0.57 16 26 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 27 H 0.13 -0.39 6.40 -52.49 -0.34 -0.73 16 28 H 0.40 -0.99 6.63 -40.82 -0.27 -1.26 16 29 H 0.07 0.21 8.14 -51.93 -0.42 -0.22 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 33 H 0.38 -1.03 9.08 45.56 0.41 -0.61 16 34 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 36 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.39 0.07 9.06 45.56 0.41 0.48 16 39 H 0.07 -0.08 7.83 -51.93 -0.41 -0.48 16 40 H 0.38 -1.37 8.74 45.56 0.40 -0.98 16 41 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 42 H -0.25 -0.33 6.75 56.52 0.38 0.05 16 43 H 0.13 0.14 4.86 -52.49 -0.26 -0.12 16 LS Contribution 348.01 15.07 5.24 5.24 Total: 0.00 -10.61 348.01 -9.73 -20.34 By element: Atomic # 1 Polarization: -4.78 SS G_CDS: -4.72 Total: -9.50 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -3.23 Total: -1.14 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.28 Total: -0.41 kcal Atomic # 8 Polarization: -6.91 SS G_CDS: -1.61 Total: -8.52 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.13 Total: -6.02 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -10.61 -9.73 -20.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13422088.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.853 kcal (2) G-P(sol) polarization free energy of solvation -10.613 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.726 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.339 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds