Wall clock time and date at job start Sat Mar 6 2021 15:00:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46909 * 1 3 3 C 1.46899 * 110.99786 * 2 1 4 4 C 1.39040 * 110.99702 * 123.95317 * 2 1 3 5 5 C 1.39197 * 119.92926 * 119.99944 * 4 2 1 6 6 C 1.50698 * 119.96777 * 359.97438 * 5 4 2 7 7 O 1.42905 * 109.47321 * 285.00129 * 6 5 4 8 8 Si 1.86295 * 109.47516 * 165.00019 * 6 5 4 9 9 C 1.37631 * 120.06879 * 180.27275 * 5 4 2 10 10 C 1.39775 * 119.93083 * 359.46251 * 9 5 4 11 11 C 1.47519 * 120.07097 * 180.27482 * 10 9 5 12 12 O 1.21597 * 119.99994 * 0.24281 * 11 10 9 13 13 N 1.34778 * 120.00481 * 180.24345 * 11 10 9 14 14 C 1.46494 * 120.00310 * 179.97438 * 13 11 10 15 15 H 1.09003 * 109.47183 * 35.00248 * 14 13 11 16 16 C 1.53002 * 109.47001 * 154.99472 * 14 13 11 17 17 C 1.53007 * 109.47042 * 179.97438 * 16 14 13 18 18 C 1.52998 * 109.47406 * 300.00357 * 17 16 14 19 19 H 1.09004 * 109.47123 * 300.00566 * 18 17 16 20 20 O 1.42896 * 109.47314 * 179.97438 * 18 17 16 21 21 C 1.53011 * 109.46913 * 59.99781 * 18 17 16 22 22 C 1.52998 * 109.47208 * 274.99683 * 14 13 11 23 23 C 1.39811 * 119.86221 * 0.51130 * 10 9 5 24 24 C 1.37589 * 119.92975 * 359.76494 * 23 10 9 25 25 H 1.08996 * 109.46773 * 296.05083 * 1 2 3 26 26 H 1.08998 * 109.46857 * 56.04352 * 1 2 3 27 27 H 1.08997 * 109.47245 * 176.04377 * 1 2 3 28 28 H 1.09003 * 109.46677 * 183.95155 * 3 2 1 29 29 H 1.08996 * 109.47199 * 303.95117 * 3 2 1 30 30 H 1.08996 * 109.47001 * 63.95946 * 3 2 1 31 31 H 1.09001 * 109.47122 * 45.00229 * 6 5 4 32 32 H 0.96696 * 114.00036 * 299.99741 * 7 6 5 33 33 H 1.48496 * 110.00262 * 180.02562 * 8 6 5 34 34 H 1.48497 * 109.99780 * 301.32070 * 8 6 5 35 35 H 1.08003 * 120.03649 * 179.72099 * 9 5 4 36 36 H 0.97000 * 119.99359 * 359.97438 * 13 11 10 37 37 H 1.08994 * 109.47581 * 300.00062 * 16 14 13 38 38 H 1.09003 * 109.46519 * 60.00369 * 16 14 13 39 39 H 1.08998 * 109.46831 * 60.00427 * 17 16 14 40 40 H 1.08997 * 109.47102 * 180.02562 * 17 16 14 41 41 H 0.96702 * 114.00301 * 180.02562 * 20 18 17 42 42 H 1.09003 * 109.46696 * 59.99913 * 21 18 17 43 43 H 1.09000 * 109.46968 * 179.97438 * 21 18 17 44 44 H 1.08998 * 109.47183 * 300.00026 * 22 14 13 45 45 H 1.08997 * 109.46811 * 60.00212 * 22 14 13 46 46 H 1.07999 * 120.03590 * 179.73093 * 23 10 9 47 47 H 1.07997 * 119.96652 * 180.02562 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9673 -0.7250 1.0767 5 6 2.7793 -1.8330 0.8518 6 6 3.1165 -2.2453 -0.5579 7 8 1.9812 -2.8756 -1.1544 8 14 4.5465 -3.4391 -0.5306 9 6 3.2694 -2.5561 1.9154 10 6 2.9603 -2.1701 3.2227 11 6 3.4889 -2.9393 4.3651 12 8 4.1980 -3.9076 4.1701 13 7 3.1860 -2.5688 5.6251 14 6 3.7105 -3.3330 6.7595 15 1 4.7100 -3.6970 6.5214 16 6 3.7768 -2.4321 7.9943 17 6 4.3240 -3.2304 9.1794 18 6 3.4024 -4.4181 9.4634 19 1 2.4029 -4.0538 9.7012 20 8 3.9138 -5.1640 10.5697 21 6 3.3362 -5.3191 8.2284 22 6 2.7893 -4.5210 7.0437 23 6 2.1449 -1.0564 3.4454 24 6 1.6533 -0.3410 2.3778 25 1 -0.3633 0.4513 0.9232 26 1 -0.3633 0.5740 -0.8524 27 1 -0.3633 -1.0252 -0.0709 28 1 3.0828 1.3432 -0.0708 29 1 1.5899 1.9163 -0.8524 30 1 1.7045 1.8723 0.9233 31 1 3.3899 -1.3643 -1.1386 32 1 1.6819 -3.6687 -0.6891 33 1 4.8892 -3.8529 -1.9149 34 1 5.7240 -2.8064 0.1162 35 1 3.8957 -3.4184 1.7401 36 1 2.6206 -1.7961 5.7806 37 1 4.4330 -1.5857 7.7919 38 1 2.7773 -2.0681 8.2325 39 1 5.3234 -3.5947 8.9414 40 1 4.3708 -2.5887 10.0592 41 1 3.3786 -5.9339 10.8062 42 1 4.3356 -5.6834 7.9905 43 1 2.6799 -6.1655 8.4309 44 1 1.7899 -4.1570 7.2819 45 1 2.7422 -5.1628 6.1640 46 1 1.9007 -0.7583 4.4543 47 1 1.0238 0.5196 2.5491 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13422196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:58 Heat of formation + Delta-G solvation = -80.801337 kcal Electronic energy + Delta-G solvation = -27683.075806 eV Core-core repulsion = 23832.196226 eV Total energy + Delta-G solvation = -3850.879581 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.177 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.76832 -40.81464 -39.56020 -37.82153 -37.27722 -36.92053 -34.61070 -32.78760 -31.97299 -31.44631 -29.36533 -28.65371 -26.90084 -26.10840 -23.98349 -23.72232 -22.97063 -22.56323 -21.37668 -20.87915 -19.14828 -18.25737 -17.86108 -17.69023 -17.54862 -16.61951 -16.44621 -16.26770 -16.01744 -15.82431 -15.58267 -15.53187 -15.24206 -14.86670 -14.81984 -14.75834 -14.27778 -14.14520 -13.90991 -13.61414 -13.42334 -13.33849 -13.21410 -13.08362 -12.99444 -12.74011 -12.58573 -12.49099 -12.26350 -12.07684 -11.91358 -11.81635 -11.37362 -10.98822 -10.80747 -10.31796 -10.17829 -10.14254 -9.80880 -9.58269 -4.91972 -0.38758 0.10911 1.37076 1.68682 1.75575 1.99198 2.06143 2.63937 2.71990 3.13363 3.43489 3.50622 3.60048 3.62258 3.63036 3.76667 3.91518 3.96031 4.04962 4.06703 4.10556 4.18931 4.19368 4.23593 4.31095 4.34556 4.38171 4.45713 4.50252 4.56000 4.61199 4.73700 4.75011 4.81309 4.88225 4.90368 4.93656 4.99060 5.00815 5.04181 5.07568 5.17381 5.22059 5.25276 5.40405 5.52148 5.74494 6.22743 6.39300 6.65594 6.69961 7.14248 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 N -0.508 5.508 3 C 0.025 3.975 4 C 0.143 3.857 5 C -0.107 4.107 6 C -0.044 4.044 7 O -0.529 6.529 8 Si 0.666 3.334 9 C -0.048 4.048 10 C -0.137 4.137 11 C 0.561 3.439 12 O -0.530 6.530 13 N -0.724 5.724 14 C 0.143 3.857 15 H 0.094 0.906 16 C -0.124 4.124 17 C -0.110 4.110 18 C 0.103 3.897 19 H 0.056 0.944 20 O -0.568 6.568 21 C -0.150 4.150 22 C -0.127 4.127 23 C -0.069 4.069 24 C -0.158 4.158 25 H 0.030 0.970 26 H 0.076 0.924 27 H 0.075 0.925 28 H 0.070 0.930 29 H 0.078 0.922 30 H 0.033 0.967 31 H 0.119 0.881 32 H 0.373 0.627 33 H -0.251 1.251 34 H -0.256 1.256 35 H 0.145 0.855 36 H 0.399 0.601 37 H 0.078 0.922 38 H 0.071 0.929 39 H 0.075 0.925 40 H 0.076 0.924 41 H 0.380 0.620 42 H 0.075 0.925 43 H 0.069 0.931 44 H 0.066 0.934 45 H 0.074 0.926 46 H 0.128 0.872 47 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.507 2.092 2.922 5.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 N -0.229 5.229 3 C -0.122 4.122 4 C 0.049 3.951 5 C -0.109 4.109 6 C -0.155 4.155 7 O -0.333 6.333 8 Si 0.567 3.433 9 C -0.067 4.067 10 C -0.140 4.140 11 C 0.348 3.652 12 O -0.407 6.407 13 N -0.375 5.375 14 C 0.039 3.961 15 H 0.112 0.888 16 C -0.162 4.162 17 C -0.148 4.148 18 C 0.044 3.956 19 H 0.074 0.926 20 O -0.374 6.374 21 C -0.188 4.188 22 C -0.166 4.166 23 C -0.089 4.089 24 C -0.178 4.178 25 H 0.049 0.951 26 H 0.094 0.906 27 H 0.094 0.906 28 H 0.089 0.911 29 H 0.096 0.904 30 H 0.051 0.949 31 H 0.136 0.864 32 H 0.219 0.781 33 H -0.175 1.175 34 H -0.181 1.181 35 H 0.162 0.838 36 H 0.235 0.765 37 H 0.096 0.904 38 H 0.090 0.910 39 H 0.093 0.907 40 H 0.095 0.905 41 H 0.227 0.773 42 H 0.094 0.906 43 H 0.088 0.912 44 H 0.084 0.916 45 H 0.093 0.907 46 H 0.146 0.854 47 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.479 1.989 1.620 3.567 hybrid contribution -1.313 1.075 0.873 1.908 sum -3.792 3.064 2.493 5.476 Atomic orbital electron populations 1.22446 0.84894 1.03245 1.00906 1.59401 1.09117 1.14019 1.40368 1.22509 1.01122 0.87205 1.01326 1.18826 0.94265 0.93293 0.88750 1.20310 0.98707 0.95591 0.96271 1.24824 0.97270 1.02499 0.90912 1.86568 1.47873 1.44794 1.54037 0.95058 0.77957 0.87152 0.83084 1.21051 0.96762 0.98189 0.90659 1.19859 1.02397 0.98102 0.93627 1.18159 0.80176 0.84013 0.82810 1.90817 1.37220 1.27386 1.85254 1.45973 1.53221 1.32875 1.05450 1.21075 0.98888 0.91455 0.84692 0.88834 1.21774 1.02464 0.98369 0.93616 1.21401 0.99690 0.95808 0.97891 1.21851 0.96641 0.91676 0.85446 0.92635 1.86518 1.55474 1.44606 1.50778 1.22232 1.02752 0.98666 0.95158 1.21855 0.99031 0.97005 0.98672 1.21152 0.95058 0.93547 0.99113 1.21651 1.02069 1.01197 0.92932 0.95150 0.90560 0.90607 0.91114 0.90356 0.94887 0.86404 0.78069 1.17519 1.18089 0.83777 0.76537 0.90369 0.91022 0.90657 0.90493 0.77275 0.90635 0.91200 0.91554 0.90737 0.85423 0.85292 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.34 60.07 0.56 0.54 16 2 N -0.51 -0.23 4.20 -186.86 -0.78 -1.01 16 3 C 0.02 -0.02 9.38 60.06 0.56 0.54 16 4 C 0.14 0.08 4.70 -83.86 -0.39 -0.32 16 5 C -0.11 -0.09 5.27 -104.49 -0.55 -0.64 16 6 C -0.04 -0.04 2.33 36.00 0.08 0.05 16 7 O -0.53 -0.53 12.88 -35.23 -0.45 -0.98 16 8 Si 0.67 0.47 29.92 -169.99 -5.09 -4.62 16 9 C -0.05 -0.04 8.19 -39.23 -0.32 -0.36 16 10 C -0.14 -0.06 5.88 -104.95 -0.62 -0.68 16 11 C 0.56 0.88 7.73 -12.48 -0.10 0.78 16 12 O -0.53 -2.65 16.00 5.28 0.08 -2.56 16 13 N -0.72 0.88 5.03 -54.85 -0.28 0.60 16 14 C 0.14 -0.13 2.45 -67.93 -0.17 -0.30 16 15 H 0.09 0.11 7.58 -51.93 -0.39 -0.28 16 16 C -0.12 0.31 5.39 -26.73 -0.14 0.16 16 17 C -0.11 0.11 5.57 -26.73 -0.15 -0.03 16 18 C 0.10 -0.10 3.47 -26.73 -0.09 -0.19 16 19 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 20 O -0.57 -0.27 13.32 -35.23 -0.47 -0.74 16 21 C -0.15 0.17 5.54 -26.75 -0.15 0.02 16 22 C -0.13 0.12 5.49 -26.76 -0.15 -0.02 16 23 C -0.07 0.10 9.53 -39.23 -0.37 -0.27 16 24 C -0.16 0.14 8.53 -39.45 -0.34 -0.19 16 25 H 0.03 -0.05 7.10 -51.93 -0.37 -0.42 16 26 H 0.08 -0.09 8.12 -51.93 -0.42 -0.52 16 27 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 28 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.08 -0.12 8.12 -51.93 -0.42 -0.54 16 30 H 0.03 -0.05 7.31 -51.93 -0.38 -0.43 16 31 H 0.12 0.23 7.77 -51.93 -0.40 -0.18 16 32 H 0.37 -1.01 8.70 45.56 0.40 -0.61 16 33 H -0.25 -0.89 7.11 56.52 0.40 -0.48 16 34 H -0.26 -0.89 7.11 56.52 0.40 -0.49 16 35 H 0.15 0.08 4.71 -52.48 -0.25 -0.17 16 36 H 0.40 -1.52 6.62 -40.82 -0.27 -1.79 16 37 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 38 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 39 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 40 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 41 H 0.38 -1.26 9.08 45.56 0.41 -0.85 16 42 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 43 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 44 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 45 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 46 H 0.13 -0.55 6.39 -52.49 -0.34 -0.88 16 47 H 0.13 -0.29 6.99 -52.49 -0.37 -0.65 16 LS Contribution 372.39 15.07 5.61 5.61 Total: 0.00 -8.08 372.39 -10.35 -18.42 By element: Atomic # 1 Polarization: -7.16 SS G_CDS: -6.65 Total: -13.81 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -2.33 Total: -0.91 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -1.06 Total: -0.41 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.84 Total: -4.28 kcal Atomic # 14 Polarization: 0.47 SS G_CDS: -5.09 Total: -4.62 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -8.08 -10.35 -18.42 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13422196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.377 kcal (2) G-P(sol) polarization free energy of solvation -8.076 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.424 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds