Wall clock time and date at job start Sat Mar 6 2021 15:01:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35989 * 117.00614 * 2 1 4 4 C 1.38561 * 120.06093 * 359.97438 * 3 2 1 5 5 C 1.38278 * 120.01542 * 179.97438 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38209 * 120.15800 * 0.27978 * 5 4 3 10 10 C 1.38378 * 120.12953 * 359.48492 * 9 5 4 11 11 Cl 1.73607 * 120.01209 * 180.28232 * 10 9 5 12 12 C 1.38623 * 119.97965 * 0.49098 * 10 9 5 13 13 O 1.36022 * 120.07814 * 179.74319 * 12 10 9 14 14 C 1.42898 * 117.00142 * 270.02166 * 13 12 10 15 15 C 1.53002 * 109.47359 * 269.99967 * 14 13 12 16 16 C 1.50706 * 109.47182 * 150.00077 * 14 13 12 17 17 O 1.21280 * 119.99900 * 5.00054 * 16 14 13 18 18 N 1.34767 * 120.00048 * 185.00272 * 16 14 13 19 19 C 1.46502 * 120.00058 * 179.97438 * 18 16 14 20 20 H 1.09004 * 109.46977 * 34.99757 * 19 18 16 21 21 C 1.53005 * 109.47353 * 154.99838 * 19 18 16 22 22 C 1.52997 * 109.46953 * 180.02562 * 21 19 18 23 23 C 1.52997 * 109.47505 * 300.00151 * 22 21 19 24 24 H 1.09004 * 109.46791 * 300.00128 * 23 22 21 25 25 O 1.42896 * 109.47098 * 180.02562 * 23 22 21 26 26 C 1.52992 * 109.47214 * 60.00137 * 23 22 21 27 27 C 1.52997 * 109.47328 * 275.00126 * 19 18 16 28 28 H 1.09000 * 109.46884 * 59.99627 * 1 2 3 29 29 H 1.08997 * 109.47854 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.46947 * 300.00656 * 1 2 3 31 31 H 1.07997 * 119.99351 * 359.97438 * 4 3 2 32 32 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 33 33 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 34 34 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 35 35 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 36 36 H 1.07994 * 119.93816 * 179.72644 * 9 5 4 37 37 H 1.08999 * 109.47315 * 30.00480 * 14 13 12 38 38 H 1.08997 * 109.46882 * 299.99890 * 15 14 13 39 39 H 1.08999 * 109.46689 * 59.99770 * 15 14 13 40 40 H 1.08997 * 109.47049 * 179.97438 * 15 14 13 41 41 H 0.97007 * 120.00224 * 0.02562 * 18 16 14 42 42 H 1.08995 * 109.47080 * 300.00425 * 21 19 18 43 43 H 1.08997 * 109.46885 * 59.99723 * 21 19 18 44 44 H 1.08999 * 109.46868 * 60.00343 * 22 21 19 45 45 H 1.09005 * 109.46920 * 179.97438 * 22 21 19 46 46 H 0.96698 * 113.99924 * 179.97438 * 25 23 22 47 47 H 1.08999 * 109.47158 * 59.99808 * 26 23 22 48 48 H 1.09002 * 109.47383 * 180.02562 * 26 23 22 49 49 H 1.09004 * 109.46791 * 299.99745 * 27 19 18 50 50 H 1.08998 * 109.47148 * 59.99779 * 27 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 -0.0005 5 6 1.9221 3.6061 0.0000 6 6 1.1007 4.8696 -0.0012 7 8 0.2776 4.9015 -1.1689 8 14 2.2349 6.3475 -0.0009 9 6 3.3021 3.6810 -0.0048 10 6 4.0606 2.5236 0.0007 11 17 5.7939 2.6212 0.0021 12 6 3.4359 1.2861 0.0006 13 8 4.1795 0.1471 0.0007 14 6 4.5347 -0.3959 -1.2725 15 6 3.4536 -1.3783 -1.7276 16 6 5.8536 -1.1166 -1.1611 17 8 6.3881 -1.2393 -0.0793 18 7 6.4391 -1.6247 -2.2635 19 6 7.7214 -2.3248 -2.1552 20 1 7.7576 -2.8733 -1.2140 21 6 7.8683 -3.3036 -3.3220 22 6 9.2072 -4.0352 -3.2085 23 6 10.3493 -3.0179 -3.2494 24 1 10.3136 -2.4693 -4.1907 25 8 11.5998 -3.7013 -3.1440 26 6 10.2025 -2.0392 -2.0827 27 6 8.8632 -1.3072 -2.1965 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3635 -1.0276 0.0005 30 1 -0.3633 0.5140 0.8900 31 1 0.2147 2.3192 -0.0014 32 1 0.4708 4.8943 0.8881 33 1 0.7725 4.8822 -1.9995 34 1 1.4370 7.6000 -0.0026 35 1 3.1186 6.3094 1.1919 36 1 3.7896 4.6446 -0.0088 37 1 4.6220 0.4110 -2.0001 38 1 3.3665 -2.1852 -1.0000 39 1 2.4998 -0.8570 -1.8082 40 1 3.7244 -1.7921 -2.6990 41 1 6.0118 -1.5262 -3.1288 42 1 7.0549 -4.0286 -3.2926 43 1 7.8321 -2.7551 -4.2632 44 1 9.2428 -4.5838 -2.2673 45 1 9.3116 -4.7328 -4.0395 46 1 12.3701 -3.1171 -3.1635 47 1 10.2381 -2.5878 -1.1415 48 1 11.0159 -1.3142 -2.1121 49 1 8.8270 -0.7586 -3.1377 50 1 8.7586 -0.6099 -1.3653 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:01 Heat of formation + Delta-G solvation = -172.424920 kcal Electronic energy + Delta-G solvation = -34682.815847 eV Core-core repulsion = 29896.224904 eV Total energy + Delta-G solvation = -4786.590943 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.142 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.01130 -41.22589 -39.87833 -39.23835 -38.92584 -37.80082 -37.00274 -36.85346 -34.73379 -33.05875 -31.88759 -31.47974 -31.36435 -29.27874 -28.54564 -26.70435 -25.49051 -23.88957 -23.65726 -23.26586 -22.62709 -21.57865 -20.96844 -19.71981 -18.71545 -18.66113 -18.33203 -18.19582 -17.53928 -17.31509 -17.02483 -16.52807 -16.29034 -16.17690 -15.93227 -15.88549 -15.71224 -15.53029 -15.45113 -15.03419 -14.65394 -14.58796 -14.32263 -14.18347 -13.97911 -13.69575 -13.38025 -13.36067 -13.27306 -13.21128 -12.99919 -12.91659 -12.71216 -12.56460 -12.46164 -12.44339 -12.20008 -12.14993 -11.92244 -11.84234 -11.76206 -11.36411 -11.29342 -10.83715 -10.69990 -10.54913 -10.14960 -9.86824 -9.41739 -5.03441 -0.35230 -0.03461 0.84410 1.23974 1.48539 1.60018 1.64215 1.93633 2.15263 2.22067 2.67353 3.26225 3.33484 3.54373 3.55103 3.62400 3.68972 3.74140 3.80771 3.83860 3.96572 4.00797 4.02276 4.03877 4.10875 4.20241 4.28735 4.30884 4.35775 4.38821 4.42062 4.43625 4.58673 4.63368 4.69709 4.72109 4.74960 4.83196 4.87517 4.94458 5.00030 5.07499 5.08067 5.11018 5.17527 5.22938 5.23420 5.30209 5.44378 5.91822 6.32023 6.49684 6.73753 6.85942 7.16057 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.313 6.313 3 C 0.127 3.873 4 C -0.163 4.163 5 C -0.063 4.063 6 C -0.063 4.063 7 O -0.546 6.546 8 Si 0.761 3.239 9 C -0.135 4.135 10 C -0.023 4.023 11 Cl -0.050 7.050 12 C 0.053 3.947 13 O -0.310 6.310 14 C 0.074 3.926 15 C -0.161 4.161 16 C 0.517 3.483 17 O -0.563 6.563 18 N -0.707 5.707 19 C 0.146 3.854 20 H 0.061 0.939 21 C -0.111 4.111 22 C -0.113 4.113 23 C 0.104 3.896 24 H 0.074 0.926 25 O -0.590 6.590 26 C -0.145 4.145 27 C -0.122 4.122 28 H 0.075 0.925 29 H 0.118 0.882 30 H 0.063 0.937 31 H 0.161 0.839 32 H 0.121 0.879 33 H 0.398 0.602 34 H -0.291 1.291 35 H -0.288 1.288 36 H 0.156 0.844 37 H 0.106 0.894 38 H 0.055 0.945 39 H 0.081 0.919 40 H 0.101 0.899 41 H 0.418 0.582 42 H 0.086 0.914 43 H 0.096 0.904 44 H 0.056 0.944 45 H 0.081 0.919 46 H 0.394 0.606 47 H 0.053 0.947 48 H 0.078 0.922 49 H 0.086 0.914 50 H 0.045 0.955 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.875 1.985 -9.614 10.554 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.226 6.226 3 C 0.080 3.920 4 C -0.182 4.182 5 C -0.064 4.064 6 C -0.174 4.174 7 O -0.354 6.354 8 Si 0.668 3.332 9 C -0.153 4.153 10 C -0.050 4.050 11 Cl -0.021 7.021 12 C 0.008 3.992 13 O -0.226 6.226 14 C 0.015 3.985 15 C -0.218 4.218 16 C 0.302 3.698 17 O -0.440 6.440 18 N -0.361 5.361 19 C 0.041 3.959 20 H 0.079 0.921 21 C -0.149 4.149 22 C -0.151 4.151 23 C 0.046 3.954 24 H 0.092 0.908 25 O -0.398 6.398 26 C -0.184 4.184 27 C -0.160 4.160 28 H 0.094 0.906 29 H 0.136 0.864 30 H 0.081 0.919 31 H 0.178 0.822 32 H 0.138 0.862 33 H 0.249 0.751 34 H -0.219 1.219 35 H -0.216 1.216 36 H 0.173 0.827 37 H 0.124 0.876 38 H 0.074 0.926 39 H 0.100 0.900 40 H 0.120 0.880 41 H 0.256 0.744 42 H 0.105 0.895 43 H 0.115 0.885 44 H 0.075 0.925 45 H 0.099 0.901 46 H 0.243 0.757 47 H 0.072 0.928 48 H 0.096 0.904 49 H 0.105 0.895 50 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges -3.809 1.804 -7.804 8.869 hybrid contribution 0.027 0.303 0.546 0.625 sum -3.782 2.108 -7.258 8.452 Atomic orbital electron populations 1.23453 0.76033 1.05881 1.02695 1.86214 1.23448 1.25178 1.87715 1.19224 0.90447 0.86153 0.96202 1.21297 1.01684 0.90072 1.05137 1.20209 0.92568 0.96114 0.97525 1.25057 0.99560 1.00659 0.92082 1.86492 1.36087 1.96736 1.16102 0.93798 0.78248 0.74058 0.87135 1.20893 0.93030 0.97162 1.04263 1.21086 0.85919 0.93661 1.04367 1.98414 1.08584 1.98462 1.96608 1.17798 0.87362 0.85394 1.08664 1.86257 1.69907 1.38143 1.28303 1.22347 0.92782 0.97562 0.85781 1.22241 0.98209 0.98853 1.02495 1.20603 0.86052 0.78781 0.84323 1.90739 1.65734 1.58433 1.29120 1.45800 1.22803 1.57414 1.10097 1.20997 0.82067 0.92829 0.99982 0.92107 1.21693 0.97336 0.97987 0.97892 1.21437 0.92680 0.97898 1.03067 1.21904 0.84002 0.92463 0.97070 0.90826 1.86482 1.16649 1.39658 1.97019 1.22198 0.97777 0.98925 0.99491 1.21808 0.93697 0.97868 1.02653 0.90622 0.86398 0.91865 0.82161 0.86194 0.75146 1.21860 1.21557 0.82717 0.87614 0.92615 0.89994 0.88026 0.74400 0.89550 0.88513 0.92545 0.90069 0.75657 0.92833 0.90361 0.89518 0.93615 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.31 -0.52 8.19 -79.57 -0.65 -1.17 16 3 C 0.13 0.32 6.54 22.56 0.15 0.47 16 4 C -0.16 0.24 8.60 22.36 0.19 0.43 16 5 C -0.06 0.13 5.39 -19.86 -0.11 0.03 16 6 C -0.06 0.26 2.82 71.24 0.20 0.46 16 7 O -0.55 2.60 12.76 -148.98 -1.90 0.70 16 8 Si 0.76 -2.87 29.78 68.60 2.04 -0.83 16 9 C -0.14 0.04 8.45 22.30 0.19 0.22 16 10 C -0.02 -0.10 6.33 22.40 0.14 0.04 16 11 Cl -0.05 -0.32 28.50 -2.72 -0.08 -0.40 16 12 C 0.05 0.32 5.56 22.58 0.13 0.45 16 13 O -0.31 -3.04 8.48 -67.41 -0.57 -3.62 16 14 C 0.07 0.21 3.19 29.85 0.10 0.30 16 15 C -0.16 0.30 9.05 71.98 0.65 0.95 16 16 C 0.52 3.30 7.14 87.66 0.63 3.93 16 17 O -0.56 -9.70 16.17 15.96 0.26 -9.45 16 18 N -0.71 1.11 5.04 -442.53 -2.23 -1.12 16 19 C 0.15 0.02 2.45 44.99 0.11 0.13 16 20 H 0.06 0.42 7.58 -2.38 -0.02 0.40 16 21 C -0.11 0.58 5.39 30.59 0.16 0.75 16 22 C -0.11 0.15 5.57 30.59 0.17 0.32 16 23 C 0.10 -0.13 3.47 30.59 0.11 -0.02 16 24 H 0.07 -0.33 8.14 -2.38 -0.02 -0.35 16 25 O -0.59 -1.12 13.32 -148.98 -1.98 -3.10 16 26 C -0.15 -0.01 5.55 30.61 0.17 0.16 16 27 C -0.12 -0.04 5.50 30.61 0.17 0.13 16 28 H 0.08 -0.68 7.66 -2.39 -0.02 -0.69 16 29 H 0.12 -1.00 8.14 -2.39 -0.02 -1.02 16 30 H 0.06 -0.41 7.66 -2.39 -0.02 -0.43 16 31 H 0.16 -0.78 6.30 -2.91 -0.02 -0.80 16 32 H 0.12 -0.45 7.96 -2.39 -0.02 -0.47 16 33 H 0.40 -5.06 8.70 -74.05 -0.64 -5.71 16 34 H -0.29 -0.94 7.11 99.48 0.71 -0.23 16 35 H -0.29 -0.64 7.11 99.48 0.71 0.07 16 36 H 0.16 -0.54 4.86 -2.91 -0.01 -0.56 16 37 H 0.11 -0.19 7.91 -2.39 -0.02 -0.21 16 38 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 39 H 0.08 -0.18 6.28 -2.39 -0.01 -0.19 16 40 H 0.10 -0.85 7.93 -2.39 -0.02 -0.87 16 41 H 0.42 -3.84 8.39 -92.70 -0.78 -4.61 16 42 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 43 H 0.10 -0.92 8.14 -2.39 -0.02 -0.94 16 44 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 45 H 0.08 -0.15 8.14 -2.38 -0.02 -0.17 16 46 H 0.39 -2.28 9.08 -74.06 -0.67 -2.95 16 47 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 48 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 49 H 0.09 -0.31 8.14 -2.38 -0.02 -0.33 16 50 H 0.04 0.29 8.14 -2.39 -0.02 0.27 16 Total: 0.00 -27.41 417.15 -1.90 -29.32 By element: Atomic # 1 Polarization: -19.05 SS G_CDS: -1.05 Total: -20.10 kcal Atomic # 6 Polarization: 5.51 SS G_CDS: 4.27 Total: 9.77 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -2.23 Total: -1.12 kcal Atomic # 8 Polarization: -11.78 SS G_CDS: -4.85 Total: -16.64 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: 2.04 Total: -0.83 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -0.08 Total: -0.40 kcal Total: -27.41 -1.90 -29.32 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.108 kcal (2) G-P(sol) polarization free energy of solvation -27.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -170.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.317 kcal (6) G-S(sol) free energy of system = (1) + (5) -172.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds