Wall clock time and date at job start Sat Mar 6 2021 15:01:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47005 * 2 1 4 4 C 1.50706 * 109.47186 * 119.99534 * 2 1 3 5 5 C 1.32699 * 124.68166 * 65.00354 * 4 2 1 6 6 C 1.44505 * 113.09717 * 180.02562 * 5 4 2 7 7 C 1.47046 * 123.49067 * 179.97438 * 6 5 4 8 8 O 1.21653 * 119.99695 * 179.97438 * 7 6 5 9 9 N 1.34773 * 119.99958 * 0.02562 * 7 6 5 10 10 C 1.46501 * 119.99916 * 179.97438 * 9 7 6 11 11 H 1.08998 * 109.46917 * 34.99705 * 10 9 7 12 12 C 1.53001 * 109.47043 * 154.99845 * 10 9 7 13 13 C 1.53000 * 109.47196 * 179.97438 * 12 10 9 14 14 C 1.52999 * 109.47183 * 300.00318 * 13 12 10 15 15 H 1.08998 * 109.46944 * 299.99430 * 14 13 12 16 16 O 1.42902 * 109.47155 * 179.97438 * 14 13 12 17 17 C 1.53001 * 109.47315 * 59.99754 * 14 13 12 18 18 C 1.52998 * 109.47144 * 274.99482 * 10 9 7 19 19 C 1.36223 * 113.01476 * 359.97438 * 6 5 4 20 20 Cl 1.73608 * 124.60414 * 180.02562 * 19 6 5 21 21 S 1.70448 * 110.78943 * 359.73145 * 19 6 5 22 22 H 0.96698 * 113.99763 * 300.00212 * 1 2 3 23 23 H 1.08992 * 109.47403 * 239.99786 * 2 1 3 24 24 H 1.48503 * 109.99841 * 178.68058 * 3 2 1 25 25 H 1.48504 * 109.99775 * 299.99979 * 3 2 1 26 26 H 1.08000 * 123.44687 * 359.97438 * 5 4 2 27 27 H 0.97003 * 120.00058 * 359.97438 * 9 7 6 28 28 H 1.09004 * 109.47078 * 299.99839 * 12 10 9 29 29 H 1.08998 * 109.47379 * 60.00142 * 12 10 9 30 30 H 1.09012 * 109.46868 * 60.00117 * 13 12 10 31 31 H 1.08999 * 109.47475 * 179.97438 * 13 12 10 32 32 H 0.96695 * 114.00339 * 179.97438 * 16 14 13 33 33 H 1.08995 * 109.46965 * 60.00236 * 17 14 13 34 34 H 1.08994 * 109.47036 * 180.02562 * 17 14 13 35 35 H 1.08995 * 109.47363 * 300.00457 * 18 10 9 36 36 H 1.09002 * 109.46942 * 60.00423 * 18 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2306 5 6 1.7484 -1.9996 1.4858 6 6 2.3354 -2.4185 2.7381 7 6 2.2681 -3.7973 3.2447 8 8 2.7858 -4.0803 4.3086 9 7 1.6340 -4.7477 2.5298 10 6 1.5675 -6.1215 3.0343 11 1 1.4826 -6.1058 4.1209 12 6 0.3472 -6.8255 2.4374 13 6 0.2781 -8.2604 2.9638 14 6 1.5483 -9.0128 2.5618 15 1 1.6330 -9.0281 1.4752 16 8 1.4840 -10.3529 3.0539 17 6 2.7686 -8.3088 3.1587 18 6 2.8375 -6.8743 2.6328 19 6 2.9574 -1.4037 3.4005 20 17 3.7616 -1.5716 4.9299 21 16 2.8458 0.0515 2.5201 22 1 -0.3933 0.4417 0.7650 23 1 1.7924 -0.5138 -0.8899 24 1 3.5346 1.7703 0.0321 25 1 1.5614 2.4679 -1.2085 26 1 1.2146 -2.6672 0.8256 27 1 1.2216 -4.5221 1.6813 28 1 -0.5576 -6.2892 2.7235 29 1 0.4322 -6.8412 1.3509 30 1 0.1934 -8.2452 4.0505 31 1 -0.5914 -8.7619 2.5389 32 1 2.2580 -10.8897 2.8354 33 1 2.6838 -8.2936 4.2452 34 1 3.6734 -8.8446 2.8720 35 1 2.9225 -6.8899 1.5462 36 1 3.7069 -6.3728 3.0580 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:06 Heat of formation + Delta-G solvation = -95.547718 kcal Electronic energy + Delta-G solvation = -22185.801646 eV Core-core repulsion = 18595.673836 eV Total energy + Delta-G solvation = -3590.127810 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.053 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.28282 -39.86488 -38.89150 -37.94056 -37.09593 -36.84997 -34.40393 -31.94431 -31.75201 -29.62535 -26.98747 -25.75547 -23.93266 -23.02318 -22.13357 -21.25085 -20.51386 -19.41349 -18.27024 -18.16784 -17.93625 -16.99439 -16.63622 -16.31262 -16.04582 -15.77164 -15.58026 -15.42043 -14.90020 -14.84962 -14.37677 -14.29224 -14.14593 -14.10802 -13.38226 -13.29384 -13.09885 -12.96091 -12.57191 -12.46204 -12.40722 -12.23477 -12.09105 -11.93928 -11.79103 -11.34087 -10.89694 -10.80108 -10.66055 -10.11810 -9.93340 -9.70502 -5.33023 -0.61940 -0.22946 0.40627 0.67235 1.01084 1.07462 1.42870 1.74989 2.12669 2.27051 3.11334 3.17369 3.37490 3.53055 3.65146 3.79472 3.84278 3.96399 4.07061 4.13535 4.19571 4.22754 4.30867 4.35766 4.41638 4.58300 4.65663 4.78479 4.85709 4.92429 4.97329 5.03519 5.07154 5.19861 5.28564 5.46336 6.29410 6.44196 6.67520 7.20372 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.024 4.024 3 Si 0.651 3.349 4 C -0.236 4.236 5 C -0.070 4.070 6 C -0.160 4.160 7 C 0.577 3.423 8 O -0.517 6.517 9 N -0.721 5.721 10 C 0.145 3.855 11 H 0.093 0.907 12 C -0.124 4.124 13 C -0.110 4.110 14 C 0.103 3.897 15 H 0.056 0.944 16 O -0.568 6.568 17 C -0.149 4.149 18 C -0.127 4.127 19 C -0.114 4.114 20 Cl 0.027 6.973 21 S 0.236 5.764 22 H 0.383 0.617 23 H 0.128 0.872 24 H -0.234 1.234 25 H -0.228 1.228 26 H 0.157 0.843 27 H 0.400 0.600 28 H 0.078 0.922 29 H 0.071 0.929 30 H 0.074 0.926 31 H 0.077 0.923 32 H 0.380 0.620 33 H 0.075 0.925 34 H 0.069 0.931 35 H 0.065 0.935 36 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.458 2.551 -3.374 4.475 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.550 3.450 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.362 3.638 8 O -0.393 6.393 9 N -0.373 5.373 10 C 0.041 3.959 11 H 0.111 0.889 12 C -0.162 4.162 13 C -0.148 4.148 14 C 0.044 3.956 15 H 0.074 0.926 16 O -0.374 6.374 17 C -0.188 4.188 18 C -0.166 4.166 19 C -0.261 4.261 20 Cl 0.056 6.944 21 S 0.501 5.499 22 H 0.231 0.769 23 H 0.145 0.855 24 H -0.158 1.158 25 H -0.151 1.151 26 H 0.174 0.826 27 H 0.234 0.766 28 H 0.097 0.903 29 H 0.090 0.910 30 H 0.093 0.907 31 H 0.095 0.905 32 H 0.227 0.773 33 H 0.093 0.907 34 H 0.087 0.913 35 H 0.084 0.916 36 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -0.488 4.308 -2.954 5.246 hybrid contribution 0.087 -2.160 -0.836 2.318 sum -0.401 2.148 -3.790 4.375 Atomic orbital electron populations 1.86540 1.16319 1.81650 1.49282 1.24430 0.85385 1.09149 0.94810 0.95074 0.82387 0.77275 0.90271 1.24800 1.08900 0.98736 1.02903 1.21003 0.99053 0.95010 0.94903 1.20240 1.05936 0.94853 0.96847 1.17400 0.78599 0.83631 0.84197 1.90882 1.45120 1.81797 1.21511 1.45885 1.57618 1.09071 1.24707 1.21051 0.94804 0.79742 1.00308 0.88872 1.21769 0.97848 0.95477 1.01085 1.21401 0.97261 0.93605 1.02497 1.21851 0.94959 0.82046 0.96744 0.92636 1.86517 1.46830 1.23179 1.80845 1.22225 0.98551 0.95794 1.02204 1.21856 0.98441 0.95020 1.01259 1.25534 1.03806 1.00531 0.96213 1.98444 1.75780 1.97289 1.22876 1.83289 1.50417 1.06630 1.09587 0.76949 0.85510 1.15841 1.15121 0.82592 0.76569 0.90308 0.91018 0.90681 0.90479 0.77307 0.90661 0.91273 0.91590 0.90855 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.17 12.88 -35.23 -0.45 0.72 16 2 C -0.02 0.06 2.94 36.01 0.11 0.17 16 3 Si 0.65 -1.75 30.92 -169.99 -5.26 -7.01 16 4 C -0.24 0.42 5.65 -36.19 -0.20 0.21 16 5 C -0.07 0.09 9.75 -39.00 -0.38 -0.29 16 6 C -0.16 -0.19 5.98 -104.58 -0.63 -0.81 16 7 C 0.58 1.44 7.75 -12.69 -0.10 1.34 16 8 O -0.52 -3.05 14.57 5.23 0.08 -2.97 16 9 N -0.72 0.32 5.06 -55.00 -0.28 0.04 16 10 C 0.15 -0.04 2.46 -67.93 -0.17 -0.20 16 11 H 0.09 0.17 7.58 -51.93 -0.39 -0.22 16 12 C -0.12 0.24 5.39 -26.73 -0.14 0.09 16 13 C -0.11 0.06 5.57 -26.73 -0.15 -0.09 16 14 C 0.10 -0.04 3.47 -26.73 -0.09 -0.14 16 15 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 16 O -0.57 -0.52 13.32 -35.23 -0.47 -0.99 16 17 C -0.15 0.07 5.54 -26.76 -0.15 -0.07 16 18 C -0.13 0.03 5.49 -26.76 -0.15 -0.12 16 19 C -0.11 -0.18 6.87 30.01 0.21 0.03 16 20 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 21 S 0.24 -0.28 20.19 -107.50 -2.17 -2.45 16 22 H 0.38 -2.20 8.70 45.56 0.40 -1.81 16 23 H 0.13 -0.35 7.96 -51.93 -0.41 -0.76 16 24 H -0.23 0.14 7.11 56.52 0.40 0.54 16 25 H -0.23 -0.01 7.11 56.52 0.40 0.39 16 26 H 0.16 -0.53 7.10 -52.49 -0.37 -0.90 16 27 H 0.40 -1.19 7.15 -40.82 -0.29 -1.48 16 28 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 29 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.07 0.03 8.14 -51.92 -0.42 -0.40 16 31 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.38 -1.09 9.08 45.56 0.41 -0.68 16 33 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 34 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 35 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 LS Contribution 326.05 15.07 4.91 4.91 Total: 0.00 -7.55 326.05 -10.55 -18.10 By element: Atomic # 1 Polarization: -5.49 SS G_CDS: -3.66 Total: -9.15 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -1.84 Total: 0.12 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -0.28 Total: 0.04 kcal Atomic # 8 Polarization: -2.39 SS G_CDS: -0.85 Total: -3.24 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: -5.26 Total: -7.01 kcal Atomic # 16 Polarization: -0.28 SS G_CDS: -2.17 Total: -2.45 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -7.55 -10.55 -18.10 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.447 kcal (2) G-P(sol) polarization free energy of solvation -7.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.993 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.555 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.101 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds