Wall clock time and date at job start Sat Mar 6 2021 15:01:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47005 * 2 1 4 4 C 1.50706 * 109.47186 * 119.99534 * 2 1 3 5 5 C 1.32699 * 124.68166 * 65.00354 * 4 2 1 6 6 C 1.44505 * 113.09717 * 180.02562 * 5 4 2 7 7 C 1.47046 * 123.49067 * 179.97438 * 6 5 4 8 8 O 1.21653 * 119.99695 * 179.97438 * 7 6 5 9 9 N 1.34773 * 119.99958 * 0.02562 * 7 6 5 10 10 C 1.46501 * 119.99916 * 179.97438 * 9 7 6 11 11 H 1.08998 * 109.46917 * 34.99705 * 10 9 7 12 12 C 1.53001 * 109.47043 * 154.99845 * 10 9 7 13 13 C 1.53000 * 109.47196 * 179.97438 * 12 10 9 14 14 C 1.52999 * 109.47183 * 300.00318 * 13 12 10 15 15 H 1.08998 * 109.46944 * 299.99430 * 14 13 12 16 16 O 1.42902 * 109.47155 * 179.97438 * 14 13 12 17 17 C 1.53001 * 109.47315 * 59.99754 * 14 13 12 18 18 C 1.52998 * 109.47144 * 274.99482 * 10 9 7 19 19 C 1.36223 * 113.01476 * 359.97438 * 6 5 4 20 20 Cl 1.73608 * 124.60414 * 180.02562 * 19 6 5 21 21 S 1.70448 * 110.78943 * 359.73145 * 19 6 5 22 22 H 0.96698 * 113.99763 * 300.00212 * 1 2 3 23 23 H 1.08992 * 109.47403 * 239.99786 * 2 1 3 24 24 H 1.48503 * 109.99841 * 178.68058 * 3 2 1 25 25 H 1.48504 * 109.99775 * 299.99979 * 3 2 1 26 26 H 1.08000 * 123.44687 * 359.97438 * 5 4 2 27 27 H 0.97003 * 120.00058 * 359.97438 * 9 7 6 28 28 H 1.09004 * 109.47078 * 299.99839 * 12 10 9 29 29 H 1.08998 * 109.47379 * 60.00142 * 12 10 9 30 30 H 1.09012 * 109.46868 * 60.00117 * 13 12 10 31 31 H 1.08999 * 109.47475 * 179.97438 * 13 12 10 32 32 H 0.96695 * 114.00339 * 179.97438 * 16 14 13 33 33 H 1.08995 * 109.46965 * 60.00236 * 17 14 13 34 34 H 1.08994 * 109.47036 * 180.02562 * 17 14 13 35 35 H 1.08995 * 109.47363 * 300.00457 * 18 10 9 36 36 H 1.09002 * 109.46942 * 60.00423 * 18 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2306 5 6 1.7484 -1.9996 1.4858 6 6 2.3354 -2.4185 2.7381 7 6 2.2681 -3.7973 3.2447 8 8 2.7858 -4.0803 4.3086 9 7 1.6340 -4.7477 2.5298 10 6 1.5675 -6.1215 3.0343 11 1 1.4826 -6.1058 4.1209 12 6 0.3472 -6.8255 2.4374 13 6 0.2781 -8.2604 2.9638 14 6 1.5483 -9.0128 2.5618 15 1 1.6330 -9.0281 1.4752 16 8 1.4840 -10.3529 3.0539 17 6 2.7686 -8.3088 3.1587 18 6 2.8375 -6.8743 2.6328 19 6 2.9574 -1.4037 3.4005 20 17 3.7616 -1.5716 4.9299 21 16 2.8458 0.0515 2.5201 22 1 -0.3933 0.4417 0.7650 23 1 1.7924 -0.5138 -0.8899 24 1 3.5346 1.7703 0.0321 25 1 1.5614 2.4679 -1.2085 26 1 1.2146 -2.6672 0.8256 27 1 1.2216 -4.5221 1.6813 28 1 -0.5576 -6.2892 2.7235 29 1 0.4322 -6.8412 1.3509 30 1 0.1934 -8.2452 4.0505 31 1 -0.5914 -8.7619 2.5389 32 1 2.2580 -10.8897 2.8354 33 1 2.6838 -8.2936 4.2452 34 1 3.6734 -8.8446 2.8720 35 1 2.9225 -6.8899 1.5462 36 1 3.7069 -6.3728 3.0580 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:05 Heat of formation + Delta-G solvation = -96.688752 kcal Electronic energy + Delta-G solvation = -22185.851125 eV Core-core repulsion = 18595.673836 eV Total energy + Delta-G solvation = -3590.177289 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.053 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.35925 -39.84792 -38.82782 -37.99906 -37.06594 -36.87765 -34.46600 -31.90158 -31.68746 -29.63627 -26.88095 -25.76100 -23.89584 -22.99143 -22.10907 -21.23501 -20.52572 -19.38216 -18.25637 -18.12416 -17.83050 -17.03076 -16.58641 -16.23791 -16.09703 -15.71293 -15.53488 -15.42099 -14.89679 -14.81218 -14.38108 -14.32084 -14.14023 -14.06836 -13.36125 -13.27251 -13.04239 -12.88554 -12.60883 -12.46173 -12.38312 -12.20399 -12.14557 -11.87196 -11.76502 -11.30418 -10.98523 -10.78220 -10.57783 -10.19821 -9.90338 -9.65084 -5.13837 -0.63903 -0.19812 0.47493 0.71820 1.03678 1.18842 1.57841 1.90076 2.10228 2.16260 3.24156 3.30630 3.56557 3.60252 3.69409 3.82862 3.88117 4.00933 4.09192 4.19407 4.28083 4.33803 4.41096 4.41635 4.47113 4.62848 4.77777 4.87006 4.93571 4.97187 4.99820 5.07726 5.10360 5.22896 5.29976 5.44844 6.44612 6.70352 6.85515 7.13322 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.018 4.018 3 Si 0.712 3.288 4 C -0.228 4.228 5 C -0.068 4.068 6 C -0.168 4.168 7 C 0.570 3.430 8 O -0.560 6.560 9 N -0.705 5.705 10 C 0.146 3.854 11 H 0.065 0.935 12 C -0.113 4.113 13 C -0.112 4.112 14 C 0.103 3.897 15 H 0.072 0.928 16 O -0.589 6.589 17 C -0.145 4.145 18 C -0.121 4.121 19 C -0.140 4.140 20 Cl 0.002 6.998 21 S 0.265 5.735 22 H 0.398 0.602 23 H 0.135 0.865 24 H -0.262 1.262 25 H -0.266 1.266 26 H 0.181 0.819 27 H 0.415 0.585 28 H 0.085 0.915 29 H 0.093 0.907 30 H 0.058 0.942 31 H 0.079 0.921 32 H 0.394 0.606 33 H 0.055 0.945 34 H 0.078 0.922 35 H 0.082 0.918 36 H 0.048 0.952 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.424 2.684 -5.269 6.391 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.132 4.132 3 Si 0.615 3.385 4 C -0.346 4.346 5 C -0.097 4.097 6 C -0.187 4.187 7 C 0.356 3.644 8 O -0.440 6.440 9 N -0.357 5.357 10 C 0.042 3.958 11 H 0.084 0.916 12 C -0.150 4.150 13 C -0.150 4.150 14 C 0.045 3.955 15 H 0.090 0.910 16 O -0.398 6.398 17 C -0.183 4.183 18 C -0.160 4.160 19 C -0.286 4.286 20 Cl 0.031 6.969 21 S 0.531 5.469 22 H 0.249 0.751 23 H 0.152 0.848 24 H -0.188 1.188 25 H -0.191 1.191 26 H 0.198 0.802 27 H 0.252 0.748 28 H 0.103 0.897 29 H 0.111 0.889 30 H 0.077 0.923 31 H 0.098 0.902 32 H 0.243 0.757 33 H 0.074 0.926 34 H 0.096 0.904 35 H 0.101 0.899 36 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges -1.478 4.438 -4.863 6.747 hybrid contribution 0.380 -2.159 -0.307 2.213 sum -1.098 2.280 -5.169 5.755 Atomic orbital electron populations 1.86518 1.16117 1.81972 1.50473 1.24426 0.85524 1.08706 0.94511 0.94311 0.79796 0.75926 0.88477 1.24957 1.08188 0.98659 1.02802 1.21140 0.98955 0.95510 0.94051 1.20342 1.06419 0.94085 0.97878 1.17712 0.78267 0.84551 0.83851 1.90860 1.47105 1.82549 1.23442 1.45765 1.56556 1.08523 1.24874 1.21001 0.95808 0.80009 0.98994 0.91629 1.21695 0.96968 0.94282 1.02096 1.21428 0.97468 0.94519 1.01580 1.21905 0.94617 0.81517 0.97462 0.91041 1.86482 1.48066 1.23916 1.81299 1.22172 0.99278 0.95839 1.01011 1.21782 0.97375 0.94805 1.02004 1.25820 1.04702 1.02236 0.95888 1.98427 1.76388 1.97513 1.24597 1.83189 1.49749 1.05042 1.08944 0.75118 0.84772 1.18808 1.19095 0.80221 0.74759 0.89675 0.88852 0.92341 0.90194 0.75654 0.92587 0.90376 0.89909 0.93300 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 3.55 12.88 -148.98 -1.92 1.63 16 2 C -0.02 0.12 2.94 71.24 0.21 0.33 16 3 Si 0.71 -4.33 30.92 68.60 2.12 -2.21 16 4 C -0.23 1.14 5.65 24.52 0.14 1.28 16 5 C -0.07 0.28 9.75 22.70 0.22 0.50 16 6 C -0.17 -0.41 5.98 -19.84 -0.12 -0.53 16 7 C 0.57 3.39 7.75 86.55 0.67 4.06 16 8 O -0.56 -7.92 14.57 -4.20 -0.06 -7.98 16 9 N -0.71 0.72 5.06 -446.16 -2.26 -1.54 16 10 C 0.15 0.00 2.46 44.99 0.11 0.11 16 11 H 0.07 0.39 7.58 -2.39 -0.02 0.37 16 12 C -0.11 0.53 5.39 30.59 0.16 0.70 16 13 C -0.11 0.14 5.57 30.59 0.17 0.31 16 14 C 0.10 -0.12 3.47 30.59 0.11 -0.02 16 15 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 16 O -0.59 -1.07 13.32 -148.98 -1.98 -3.06 16 17 C -0.14 0.05 5.54 30.58 0.17 0.22 16 18 C -0.12 -0.01 5.49 30.58 0.17 0.16 16 19 C -0.14 -0.53 6.87 67.35 0.46 -0.07 16 20 Cl 0.00 0.01 27.20 -2.72 -0.07 -0.06 16 21 S 0.27 -0.74 20.19 -56.49 -1.14 -1.88 16 22 H 0.40 -5.46 8.70 -74.06 -0.64 -6.10 16 23 H 0.14 -1.05 7.96 -2.39 -0.02 -1.06 16 24 H -0.26 0.36 7.11 99.48 0.71 1.07 16 25 H -0.27 -0.09 7.11 99.48 0.71 0.62 16 26 H 0.18 -1.69 7.10 -2.91 -0.02 -1.72 16 27 H 0.41 -3.11 7.15 -92.71 -0.66 -3.78 16 28 H 0.08 -0.47 8.14 -2.38 -0.02 -0.49 16 29 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 30 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 31 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 32 H 0.39 -2.31 9.08 -74.06 -0.67 -2.99 16 33 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 34 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 35 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 36 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 Total: 0.00 -19.70 326.05 -3.64 -23.34 By element: Atomic # 1 Polarization: -14.50 SS G_CDS: -0.80 Total: -15.30 kcal Atomic # 6 Polarization: 4.57 SS G_CDS: 2.47 Total: 7.04 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -2.26 Total: -1.54 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -3.96 Total: -9.40 kcal Atomic # 14 Polarization: -4.33 SS G_CDS: 2.12 Total: -2.21 kcal Atomic # 16 Polarization: -0.74 SS G_CDS: -1.14 Total: -1.88 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -0.07 Total: -0.06 kcal Total: -19.70 -3.64 -23.34 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.348 kcal (2) G-P(sol) polarization free energy of solvation -19.704 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.052 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.637 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.341 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.689 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds