Wall clock time and date at job start Sat Mar 6 2021 15:01:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46777 * 2 1 4 4 C 1.50695 * 109.47641 * 120.00483 * 2 1 3 5 5 C 1.34175 * 125.43696 * 65.26390 * 4 2 1 6 6 C 1.47021 * 105.95323 * 180.13005 * 5 4 2 7 7 C 1.47382 * 127.19531 * 179.89426 * 6 5 4 8 8 O 1.21612 * 119.99830 * 359.70648 * 7 6 5 9 9 N 1.34768 * 120.00123 * 179.70446 * 7 6 5 10 10 C 1.46501 * 119.99906 * 180.02562 * 9 7 6 11 11 H 1.08997 * 109.47324 * 34.99816 * 10 9 7 12 12 C 1.52998 * 109.47313 * 155.00357 * 10 9 7 13 13 C 1.52998 * 109.47429 * 180.02562 * 12 10 9 14 14 C 1.52999 * 109.46788 * 299.99799 * 13 12 10 15 15 H 1.09008 * 109.47201 * 299.99563 * 14 13 12 16 16 O 1.42903 * 109.47256 * 180.02562 * 14 13 12 17 17 C 1.53001 * 109.47329 * 59.99953 * 14 13 12 18 18 C 1.52998 * 109.46901 * 299.99578 * 17 14 13 19 19 C 1.36422 * 105.61760 * 359.62676 * 6 5 4 20 20 O 1.33655 * 108.39186 * 0.22850 * 19 6 5 21 21 H 0.96701 * 114.00088 * 299.99336 * 1 2 3 22 22 H 1.09007 * 109.46700 * 240.00746 * 2 1 3 23 23 H 1.48509 * 109.99668 * 178.68183 * 3 2 1 24 24 H 1.48501 * 110.00383 * 300.00151 * 3 2 1 25 25 H 1.07998 * 127.02630 * 0.02562 * 5 4 2 26 26 H 0.97000 * 120.00606 * 0.02562 * 9 7 6 27 27 H 1.08997 * 109.47366 * 59.99485 * 12 10 9 28 28 H 1.09009 * 109.46785 * 299.99754 * 12 10 9 29 29 H 1.08997 * 109.47384 * 179.97438 * 13 12 10 30 30 H 1.08997 * 109.47329 * 59.99386 * 13 12 10 31 31 H 0.96700 * 114.00311 * 180.02562 * 16 14 13 32 32 H 1.08997 * 109.47215 * 60.00152 * 17 14 13 33 33 H 1.08999 * 109.47164 * 180.02562 * 17 14 13 34 34 H 1.08997 * 109.47655 * 300.00305 * 18 17 14 35 35 H 1.09005 * 109.46908 * 179.97438 * 18 17 14 36 36 H 1.07994 * 125.80172 * 180.22413 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.7595 -2.0133 1.5010 6 6 2.4124 -2.2462 2.7976 7 6 2.5007 -3.5194 3.5348 8 8 1.9934 -4.5245 3.0752 9 7 3.1437 -3.5697 4.7181 10 6 3.2320 -4.8354 5.4505 11 1 3.3229 -5.6593 4.7427 12 6 4.4583 -4.8110 6.3651 13 6 4.5509 -6.1331 7.1295 14 6 3.2890 -6.3235 7.9735 15 1 3.1978 -5.4999 8.6817 16 8 3.3756 -7.5581 8.6880 17 6 2.0626 -6.3480 7.0590 18 6 1.9701 -5.0258 6.2946 19 6 2.9246 -1.0388 3.1730 20 8 2.6270 -0.1421 2.2276 21 1 -0.3933 0.4416 0.7651 22 1 1.7923 -0.5138 -0.8901 23 1 3.5346 1.7704 0.0321 24 1 1.5613 2.4680 -1.2084 25 1 1.2451 -2.7418 0.8919 26 1 3.5482 -2.7680 5.0849 27 1 4.3674 -3.9872 7.0729 28 1 5.3574 -4.6758 5.7637 29 1 5.4247 -6.1159 7.7807 30 1 4.6420 -6.9567 6.4214 31 1 2.6076 -7.7449 9.2451 32 1 2.1538 -7.1715 6.3508 33 1 1.1636 -6.4832 7.6603 34 1 1.8789 -4.2023 7.0027 35 1 1.0966 -5.0434 5.6427 36 1 3.4766 -0.8412 4.0799 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:09 Heat of formation + Delta-G solvation = -106.805519 kcal Electronic energy + Delta-G solvation = -20336.287713 eV Core-core repulsion = 16981.400842 eV Total energy + Delta-G solvation = -3354.886871 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 268.119 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -43.75053 -41.01199 -39.46949 -38.06544 -36.98107 -34.65747 -33.80770 -31.97560 -31.89506 -29.44088 -26.72028 -25.08263 -23.96454 -22.87659 -22.28513 -21.36315 -20.63639 -19.38724 -18.26293 -17.95757 -17.57702 -17.36956 -17.20733 -16.39631 -16.05086 -15.88328 -15.61323 -15.50601 -14.79739 -14.71715 -14.25061 -14.18895 -14.00738 -13.68565 -13.40307 -13.31428 -13.06830 -12.89680 -12.50645 -12.27052 -12.17043 -11.83606 -11.37626 -11.05938 -10.89753 -10.82428 -10.67440 -10.14930 -9.84438 -5.10061 0.19944 0.87467 1.08598 1.43086 1.73364 1.87780 1.99873 2.33212 3.12440 3.18114 3.36120 3.49519 3.57130 3.61721 3.86677 3.92810 4.04228 4.10168 4.18741 4.21718 4.29317 4.32628 4.39599 4.55148 4.56381 4.73672 4.75668 4.88683 4.93813 5.00323 5.04438 5.16326 5.19438 5.25107 5.41530 5.79866 6.34946 6.40804 6.65514 7.18407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.029 4.029 3 Si 0.707 3.293 4 C -0.058 4.058 5 C -0.123 4.123 6 C -0.238 4.238 7 C 0.588 3.412 8 O -0.529 6.529 9 N -0.725 5.725 10 C 0.144 3.856 11 H 0.093 0.907 12 C -0.124 4.124 13 C -0.110 4.110 14 C 0.103 3.897 15 H 0.056 0.944 16 O -0.568 6.568 17 C -0.150 4.150 18 C -0.127 4.127 19 C 0.032 3.968 20 O -0.165 6.165 21 H 0.384 0.616 22 H 0.134 0.866 23 H -0.254 1.254 24 H -0.247 1.247 25 H 0.162 0.838 26 H 0.398 0.602 27 H 0.072 0.928 28 H 0.078 0.922 29 H 0.077 0.923 30 H 0.074 0.926 31 H 0.380 0.620 32 H 0.075 0.925 33 H 0.069 0.931 34 H 0.066 0.934 35 H 0.073 0.927 36 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.739 5.035 4.504 6.796 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.607 3.393 4 C -0.106 4.106 5 C -0.143 4.143 6 C -0.242 4.242 7 C 0.376 3.624 8 O -0.406 6.406 9 N -0.376 5.376 10 C 0.040 3.960 11 H 0.111 0.889 12 C -0.162 4.162 13 C -0.148 4.148 14 C 0.044 3.956 15 H 0.074 0.926 16 O -0.374 6.374 17 C -0.188 4.188 18 C -0.166 4.166 19 C -0.039 4.039 20 O -0.061 6.061 21 H 0.232 0.768 22 H 0.151 0.849 23 H -0.178 1.178 24 H -0.171 1.171 25 H 0.179 0.821 26 H 0.232 0.768 27 H 0.090 0.910 28 H 0.096 0.904 29 H 0.096 0.904 30 H 0.093 0.907 31 H 0.227 0.773 32 H 0.093 0.907 33 H 0.088 0.912 34 H 0.085 0.915 35 H 0.092 0.908 36 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 1.585 4.857 2.846 5.848 hybrid contribution -0.325 -0.458 0.494 0.748 sum 1.260 4.399 3.340 5.665 Atomic orbital electron populations 1.86580 1.16101 1.81742 1.49113 1.24471 0.85282 1.11383 0.92786 0.94260 0.81360 0.76522 0.87203 1.22738 1.01745 0.93427 0.92732 1.22549 1.01135 0.95319 0.95305 1.21543 1.09170 0.94358 0.99162 1.17271 0.77884 0.87114 0.80133 1.90824 1.46220 1.35629 1.67943 1.45890 1.57802 1.12592 1.21358 1.21064 0.94867 0.86580 0.93486 0.88924 1.21769 0.97717 0.98312 0.98360 1.21402 0.97378 0.97280 0.98759 1.21850 0.94881 0.86302 0.92555 0.92603 1.86519 1.46930 1.40368 1.63566 1.22239 0.98552 0.98392 0.99648 1.21869 0.98441 0.97474 0.98803 1.24469 0.99436 0.86751 0.93248 1.83682 1.57158 1.38872 1.26430 0.76817 0.84930 1.17777 1.17129 0.82072 0.76835 0.90955 0.90352 0.90446 0.90679 0.77268 0.90658 0.91195 0.91494 0.90844 0.76963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.27 12.88 -35.23 -0.45 -0.19 16 2 C -0.03 0.03 2.97 36.00 0.11 0.13 16 3 Si 0.71 -1.21 32.09 -169.99 -5.46 -6.67 16 4 C -0.06 -0.01 6.18 -35.74 -0.22 -0.23 16 5 C -0.12 -0.23 10.90 -37.45 -0.41 -0.64 16 6 C -0.24 -0.24 6.31 -103.27 -0.65 -0.89 16 7 C 0.59 1.41 7.78 -12.54 -0.10 1.31 16 8 O -0.53 -3.58 16.65 5.27 0.09 -3.49 16 9 N -0.73 0.82 5.07 -54.89 -0.28 0.54 16 10 C 0.14 -0.09 2.45 -67.93 -0.17 -0.26 16 11 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 12 C -0.12 0.31 5.39 -26.73 -0.14 0.16 16 13 C -0.11 0.10 5.57 -26.73 -0.15 -0.05 16 14 C 0.10 -0.08 3.47 -26.73 -0.09 -0.17 16 15 H 0.06 -0.09 8.14 -51.92 -0.42 -0.52 16 16 O -0.57 -0.36 13.32 -35.23 -0.47 -0.83 16 17 C -0.15 0.12 5.55 -26.73 -0.15 -0.03 16 18 C -0.13 0.08 5.50 -26.73 -0.15 -0.07 16 19 C 0.03 -0.07 11.61 30.08 0.35 0.28 16 20 O -0.17 0.13 8.90 7.64 0.07 0.20 16 21 H 0.38 -1.71 8.70 45.56 0.40 -1.31 16 22 H 0.13 -0.14 7.96 -51.92 -0.41 -0.55 16 23 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 24 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 25 H 0.16 0.40 8.06 -52.49 -0.42 -0.02 16 26 H 0.40 -1.77 7.57 -40.82 -0.31 -2.08 16 27 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.08 -0.22 8.14 -51.92 -0.42 -0.64 16 29 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 31 H 0.38 -1.20 9.08 45.56 0.41 -0.79 16 32 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 33 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 36 H 0.21 -1.45 7.47 -52.49 -0.39 -1.84 16 LS Contribution 306.51 15.07 4.62 4.62 Total: 0.00 -9.55 306.51 -7.78 -17.32 By element: Atomic # 1 Polarization: -6.94 SS G_CDS: -4.12 Total: -11.06 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -1.77 Total: -0.45 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -0.28 Total: 0.54 kcal Atomic # 8 Polarization: -3.54 SS G_CDS: -0.77 Total: -4.31 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.46 Total: -6.67 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -9.55 -7.78 -17.32 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.483 kcal (2) G-P(sol) polarization free energy of solvation -9.547 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.030 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.775 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.806 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds