Wall clock time and date at job start Sat Mar 6 2021 15:01:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46777 * 2 1 4 4 C 1.50695 * 109.47641 * 120.00483 * 2 1 3 5 5 C 1.34175 * 125.43696 * 65.26390 * 4 2 1 6 6 C 1.47021 * 105.95323 * 180.13005 * 5 4 2 7 7 C 1.47382 * 127.19531 * 179.89426 * 6 5 4 8 8 O 1.21612 * 119.99830 * 359.70648 * 7 6 5 9 9 N 1.34768 * 120.00123 * 179.70446 * 7 6 5 10 10 C 1.46501 * 119.99906 * 180.02562 * 9 7 6 11 11 H 1.08997 * 109.47324 * 34.99816 * 10 9 7 12 12 C 1.52998 * 109.47313 * 155.00357 * 10 9 7 13 13 C 1.52998 * 109.47429 * 180.02562 * 12 10 9 14 14 C 1.52999 * 109.46788 * 299.99799 * 13 12 10 15 15 H 1.09008 * 109.47201 * 299.99563 * 14 13 12 16 16 O 1.42903 * 109.47256 * 180.02562 * 14 13 12 17 17 C 1.53001 * 109.47329 * 59.99953 * 14 13 12 18 18 C 1.52998 * 109.46901 * 299.99578 * 17 14 13 19 19 C 1.36422 * 105.61760 * 359.62676 * 6 5 4 20 20 O 1.33655 * 108.39186 * 0.22850 * 19 6 5 21 21 H 0.96701 * 114.00088 * 299.99336 * 1 2 3 22 22 H 1.09007 * 109.46700 * 240.00746 * 2 1 3 23 23 H 1.48509 * 109.99668 * 178.68183 * 3 2 1 24 24 H 1.48501 * 110.00383 * 300.00151 * 3 2 1 25 25 H 1.07998 * 127.02630 * 0.02562 * 5 4 2 26 26 H 0.97000 * 120.00606 * 0.02562 * 9 7 6 27 27 H 1.08997 * 109.47366 * 59.99485 * 12 10 9 28 28 H 1.09009 * 109.46785 * 299.99754 * 12 10 9 29 29 H 1.08997 * 109.47384 * 179.97438 * 13 12 10 30 30 H 1.08997 * 109.47329 * 59.99386 * 13 12 10 31 31 H 0.96700 * 114.00311 * 180.02562 * 16 14 13 32 32 H 1.08997 * 109.47215 * 60.00152 * 17 14 13 33 33 H 1.08999 * 109.47164 * 180.02562 * 17 14 13 34 34 H 1.08997 * 109.47655 * 300.00305 * 18 17 14 35 35 H 1.09005 * 109.46908 * 179.97438 * 18 17 14 36 36 H 1.07994 * 125.80172 * 180.22413 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.7595 -2.0133 1.5010 6 6 2.4124 -2.2462 2.7976 7 6 2.5007 -3.5194 3.5348 8 8 1.9934 -4.5245 3.0752 9 7 3.1437 -3.5697 4.7181 10 6 3.2320 -4.8354 5.4505 11 1 3.3229 -5.6593 4.7427 12 6 4.4583 -4.8110 6.3651 13 6 4.5509 -6.1331 7.1295 14 6 3.2890 -6.3235 7.9735 15 1 3.1978 -5.4999 8.6817 16 8 3.3756 -7.5581 8.6880 17 6 2.0626 -6.3480 7.0590 18 6 1.9701 -5.0258 6.2946 19 6 2.9246 -1.0388 3.1730 20 8 2.6270 -0.1421 2.2276 21 1 -0.3933 0.4416 0.7651 22 1 1.7923 -0.5138 -0.8901 23 1 3.5346 1.7704 0.0321 24 1 1.5613 2.4680 -1.2084 25 1 1.2451 -2.7418 0.8919 26 1 3.5482 -2.7680 5.0849 27 1 4.3674 -3.9872 7.0729 28 1 5.3574 -4.6758 5.7637 29 1 5.4247 -6.1159 7.7807 30 1 4.6420 -6.9567 6.4214 31 1 2.6076 -7.7449 9.2451 32 1 2.1538 -7.1715 6.3508 33 1 1.1636 -6.4832 7.6603 34 1 1.8789 -4.2023 7.0027 35 1 1.0966 -5.0434 5.6427 36 1 3.4766 -0.8412 4.0799 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:08 Heat of formation + Delta-G solvation = -111.690704 kcal Electronic energy + Delta-G solvation = -20336.499551 eV Core-core repulsion = 16981.400842 eV Total energy + Delta-G solvation = -3355.098709 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 268.119 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -43.72656 -41.06874 -39.51450 -38.00553 -37.01263 -34.74424 -33.80544 -31.90338 -31.86456 -29.42121 -26.67332 -25.09586 -23.89237 -22.84616 -22.30901 -21.36135 -20.62385 -19.33707 -18.22348 -17.90539 -17.55315 -17.39729 -17.20453 -16.38017 -16.07688 -15.84826 -15.57576 -15.48707 -14.87759 -14.73381 -14.26440 -14.19005 -14.04798 -13.65477 -13.34751 -13.27152 -13.01302 -12.82908 -12.47931 -12.22247 -12.20084 -11.77307 -11.33300 -11.23504 -10.97688 -10.79045 -10.62610 -10.20043 -9.80028 -4.98025 0.25697 0.80207 1.17766 1.51532 1.80910 1.93888 2.00460 2.22774 3.25118 3.31029 3.48452 3.58714 3.58895 3.69196 3.95730 4.00343 4.08824 4.19590 4.25021 4.28875 4.34661 4.41718 4.45440 4.49250 4.63638 4.87167 4.88538 4.94620 4.99910 5.07669 5.10239 5.10740 5.22997 5.28953 5.43168 5.82604 6.46541 6.62510 6.86315 7.13762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.038 4.038 3 Si 0.802 3.198 4 C -0.052 4.052 5 C -0.155 4.155 6 C -0.271 4.271 7 C 0.586 3.414 8 O -0.588 6.588 9 N -0.705 5.705 10 C 0.144 3.856 11 H 0.060 0.940 12 C -0.111 4.111 13 C -0.113 4.113 14 C 0.104 3.896 15 H 0.075 0.925 16 O -0.590 6.590 17 C -0.146 4.146 18 C -0.121 4.121 19 C 0.070 3.930 20 O -0.162 6.162 21 H 0.400 0.600 22 H 0.129 0.871 23 H -0.287 1.287 24 H -0.286 1.286 25 H 0.141 0.859 26 H 0.418 0.582 27 H 0.099 0.901 28 H 0.085 0.915 29 H 0.081 0.919 30 H 0.055 0.945 31 H 0.394 0.606 32 H 0.052 0.948 33 H 0.079 0.921 34 H 0.088 0.912 35 H 0.046 0.954 36 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.635 7.124 6.431 9.735 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.147 4.147 3 Si 0.705 3.295 4 C -0.100 4.100 5 C -0.175 4.175 6 C -0.276 4.276 7 C 0.375 3.625 8 O -0.469 6.469 9 N -0.356 5.356 10 C 0.040 3.960 11 H 0.078 0.922 12 C -0.149 4.149 13 C -0.152 4.152 14 C 0.045 3.955 15 H 0.093 0.907 16 O -0.399 6.399 17 C -0.184 4.184 18 C -0.160 4.160 19 C -0.001 4.001 20 O -0.057 6.057 21 H 0.251 0.749 22 H 0.146 0.854 23 H -0.214 1.214 24 H -0.212 1.212 25 H 0.158 0.842 26 H 0.256 0.744 27 H 0.117 0.883 28 H 0.103 0.897 29 H 0.099 0.901 30 H 0.074 0.926 31 H 0.244 0.756 32 H 0.071 0.929 33 H 0.097 0.903 34 H 0.107 0.893 35 H 0.065 0.935 36 H 0.282 0.718 Dipole moment (debyes) X Y Z Total from point charges 2.477 6.961 4.827 8.826 hybrid contribution -0.603 -1.134 -0.110 1.289 sum 1.873 5.828 4.717 7.728 Atomic orbital electron populations 1.86545 1.16287 1.82260 1.50347 1.24710 0.85314 1.12389 0.92320 0.93166 0.77751 0.73607 0.84939 1.22750 1.01408 0.92759 0.93083 1.22564 1.02513 0.95997 0.96403 1.21479 1.11603 0.95095 0.99413 1.17556 0.77319 0.86905 0.80722 1.90792 1.48980 1.37640 1.69532 1.45693 1.56513 1.13301 1.20114 1.21018 0.96065 0.85839 0.93125 0.92208 1.21698 0.96665 0.98329 0.98231 1.21441 0.97633 0.97525 0.98557 1.21915 0.94453 0.86435 0.92671 0.90708 1.86484 1.48160 1.41169 1.64060 1.22194 0.99377 0.97533 0.99345 1.21800 0.97233 0.98315 0.98641 1.25360 0.96554 0.84881 0.93287 1.83714 1.56743 1.38909 1.26378 0.74891 0.85429 1.21411 1.21241 0.84161 0.74409 0.88258 0.89653 0.90070 0.92628 0.75623 0.92882 0.90257 0.89319 0.93549 0.71800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.28 12.88 -148.98 -1.92 -1.63 16 2 C -0.04 0.05 2.97 71.23 0.21 0.26 16 3 Si 0.80 -3.07 32.09 68.60 2.20 -0.87 16 4 C -0.05 -0.03 6.18 24.76 0.15 0.12 16 5 C -0.15 -0.86 10.90 23.65 0.26 -0.60 16 6 C -0.27 -0.62 6.31 -18.99 -0.12 -0.74 16 7 C 0.59 3.55 7.78 86.65 0.67 4.23 16 8 O -0.59 -9.96 16.65 -4.07 -0.07 -10.02 16 9 N -0.70 1.93 5.07 -445.84 -2.26 -0.33 16 10 C 0.14 -0.11 2.45 44.99 0.11 0.00 16 11 H 0.06 0.37 7.58 -2.39 -0.02 0.36 16 12 C -0.11 0.69 5.39 30.59 0.16 0.86 16 13 C -0.11 0.23 5.57 30.59 0.17 0.40 16 14 C 0.10 -0.21 3.47 30.59 0.11 -0.11 16 15 H 0.08 -0.41 8.14 -2.38 -0.02 -0.43 16 16 O -0.59 -0.74 13.32 -148.98 -1.98 -2.73 16 17 C -0.15 0.13 5.55 30.59 0.17 0.30 16 18 C -0.12 0.10 5.50 30.60 0.17 0.26 16 19 C 0.07 -0.46 11.61 67.40 0.78 0.33 16 20 O -0.16 0.54 8.90 4.44 0.04 0.58 16 21 H 0.40 -3.62 8.70 -74.06 -0.64 -4.27 16 22 H 0.13 -0.10 7.96 -2.38 -0.02 -0.12 16 23 H -0.29 -0.54 7.11 99.48 0.71 0.17 16 24 H -0.29 -0.70 7.11 99.48 0.71 0.00 16 25 H 0.14 1.25 8.06 -2.91 -0.02 1.22 16 26 H 0.42 -4.83 7.57 -92.71 -0.70 -5.54 16 27 H 0.10 -1.09 8.14 -2.39 -0.02 -1.11 16 28 H 0.08 -0.60 8.14 -2.38 -0.02 -0.62 16 29 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 30 H 0.05 0.10 8.14 -2.39 -0.02 0.08 16 31 H 0.39 -2.55 9.08 -74.06 -0.67 -3.22 16 32 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 33 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 34 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 35 H 0.05 0.24 8.14 -2.38 -0.02 0.22 16 36 H 0.27 -4.90 7.47 -2.91 -0.02 -4.92 16 Total: 0.00 -26.65 306.51 -2.00 -28.66 By element: Atomic # 1 Polarization: -18.09 SS G_CDS: -0.86 Total: -18.95 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: 2.85 Total: 5.30 kcal Atomic # 7 Polarization: 1.93 SS G_CDS: -2.26 Total: -0.33 kcal Atomic # 8 Polarization: -9.88 SS G_CDS: -3.93 Total: -13.81 kcal Atomic # 14 Polarization: -3.07 SS G_CDS: 2.20 Total: -0.87 kcal Total: -26.65 -2.00 -28.66 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.035 kcal (2) G-P(sol) polarization free energy of solvation -26.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.655 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.691 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds