Wall clock time and date at job start Sat Mar 6 2021 15:01:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37873 * 126.45833 * 2 1 4 4 C 1.46681 * 126.23113 * 359.97438 * 3 2 1 5 5 O 1.21694 * 120.00025 * 359.97438 * 4 3 2 6 6 N 1.34776 * 119.99898 * 179.97438 * 4 3 2 7 7 C 1.46497 * 119.99884 * 179.97438 * 6 4 3 8 8 H 1.09005 * 109.47309 * 35.00142 * 7 6 4 9 9 C 1.53004 * 109.47048 * 155.00026 * 7 6 4 10 10 C 1.52998 * 109.46992 * 180.02562 * 9 7 6 11 11 C 1.52996 * 109.47593 * 300.00208 * 10 9 7 12 12 H 1.09007 * 109.47180 * 300.00496 * 11 10 9 13 13 O 1.42901 * 109.47764 * 179.97438 * 11 10 9 14 14 C 1.53004 * 109.47121 * 59.99872 * 11 10 9 15 15 C 1.52996 * 109.47584 * 275.00263 * 7 6 4 16 16 N 1.37645 * 107.53664 * 179.97438 * 3 2 1 17 17 C 1.35532 * 108.64316 * 0.02562 * 16 3 2 18 18 C 1.50702 * 125.56743 * 179.97438 * 17 16 3 19 19 O 1.42897 * 109.47078 * 300.00373 * 18 17 16 20 20 Si 1.86293 * 109.47338 * 179.97438 * 18 17 16 21 21 C 1.35456 * 108.87181 * 359.74305 * 17 16 3 22 22 H 1.09002 * 109.47152 * 89.99880 * 1 2 3 23 23 H 1.09001 * 109.46980 * 329.99981 * 1 2 3 24 24 H 1.09004 * 109.47113 * 209.99962 * 1 2 3 25 25 H 0.96998 * 120.00173 * 0.02562 * 6 4 3 26 26 H 1.08995 * 109.47001 * 300.00270 * 9 7 6 27 27 H 1.08999 * 109.47198 * 60.00308 * 9 7 6 28 28 H 1.09005 * 109.47356 * 60.00121 * 10 9 7 29 29 H 1.08998 * 109.47049 * 180.02562 * 10 9 7 30 30 H 0.96694 * 114.00015 * 179.97438 * 13 11 10 31 31 H 1.08991 * 109.46924 * 60.00380 * 14 11 10 32 32 H 1.09005 * 109.47167 * 180.02562 * 14 11 10 33 33 H 1.09007 * 109.47180 * 300.00432 * 15 7 6 34 34 H 1.09005 * 109.47409 * 59.99761 * 15 7 6 35 35 H 0.96997 * 125.68157 * 179.97438 * 16 3 2 36 36 H 1.09002 * 109.47006 * 59.99637 * 18 17 16 37 37 H 0.96699 * 114.00065 * 179.97438 * 19 18 17 38 38 H 1.48497 * 109.99982 * 298.68102 * 20 18 17 39 39 H 1.48498 * 110.00279 * 60.00342 * 20 18 17 40 40 H 1.08006 * 126.06816 * 180.27918 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5093 -0.0005 5 8 0.7027 2.7766 -0.0015 6 7 2.8037 3.4999 0.0001 7 6 2.3678 4.8985 -0.0010 8 1 1.4553 4.9952 0.5874 9 6 3.4635 5.7747 0.6094 10 6 3.0080 7.2353 0.6089 11 6 2.7373 7.6847 -0.8283 12 1 3.6496 7.5883 -1.4171 13 8 2.3113 9.0487 -0.8289 14 6 1.6416 6.8085 -1.4388 15 6 2.0975 5.3475 -1.4385 16 7 3.6284 0.6626 0.0006 17 6 3.6218 -0.6927 0.0004 18 6 4.8434 -1.5753 0.0003 19 8 5.6241 -1.3079 -1.1663 20 14 4.3183 -3.3627 0.0008 21 6 2.3380 -1.1246 0.0054 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3633 0.8900 0.5138 24 1 -0.3633 -0.8900 0.5138 25 1 3.7500 3.2869 0.0005 26 1 3.6560 5.4549 1.6335 27 1 4.3760 5.6781 0.0210 28 1 2.0957 7.3317 1.1976 29 1 3.7888 7.8596 1.0434 30 1 2.1218 9.4012 -1.7091 31 1 0.7294 6.9048 -0.8502 32 1 1.4490 7.1283 -2.4629 33 1 3.0100 5.2508 -2.0270 34 1 1.3169 4.7233 -1.8734 35 1 4.4191 1.2244 0.0004 36 1 5.4388 -1.3716 0.8903 37 1 6.4280 -1.8412 -1.2323 38 1 3.5328 -3.6609 1.2252 39 1 3.5055 -3.6536 -1.2075 40 1 2.0136 -2.1549 0.0108 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_13940406.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:11 Heat of formation + Delta-G solvation = -86.016369 kcal Electronic energy + Delta-G solvation = -22388.100654 eV Core-core repulsion = 18976.296311 eV Total energy + Delta-G solvation = -3411.804343 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.59039 -40.84141 -39.39783 -37.82567 -37.00448 -34.69117 -33.43180 -31.98747 -31.87725 -29.54799 -28.15307 -26.67651 -23.97870 -23.61006 -22.03478 -21.58515 -21.29041 -20.25933 -19.36061 -18.62646 -18.26180 -17.45418 -16.90336 -16.47681 -16.01930 -15.89323 -15.59282 -15.15326 -15.05057 -14.99776 -14.56776 -14.46981 -14.16853 -13.80573 -13.52442 -13.42788 -13.34286 -13.23813 -13.10492 -13.01326 -12.50372 -12.47778 -12.27747 -12.01344 -11.84141 -11.38294 -10.98216 -10.82084 -10.61736 -10.18843 -9.83294 -9.14503 -5.08139 0.35667 1.08053 1.48650 1.65053 1.94044 1.97380 2.09115 2.36712 3.12944 3.13735 3.48147 3.60900 3.69223 3.79247 3.91915 4.03329 4.05618 4.09240 4.11574 4.18158 4.29756 4.32612 4.36230 4.54400 4.70369 4.73104 4.80260 4.87276 4.92540 4.99672 5.01403 5.03588 5.15505 5.20335 5.23059 5.34916 5.44359 5.65020 5.87992 6.22889 6.37226 6.44239 6.65031 7.14532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.061 4.061 3 C -0.057 4.057 4 C 0.593 3.407 5 O -0.520 6.520 6 N -0.730 5.730 7 C 0.145 3.855 8 H 0.094 0.906 9 C -0.124 4.124 10 C -0.109 4.109 11 C 0.103 3.897 12 H 0.056 0.944 13 O -0.568 6.568 14 C -0.149 4.149 15 C -0.127 4.127 16 N -0.522 5.522 17 C 0.073 3.927 18 C -0.060 4.060 19 O -0.550 6.550 20 Si 0.717 3.283 21 C -0.209 4.209 22 H 0.070 0.930 23 H 0.083 0.917 24 H 0.064 0.936 25 H 0.393 0.607 26 H 0.077 0.923 27 H 0.071 0.929 28 H 0.075 0.925 29 H 0.077 0.923 30 H 0.380 0.620 31 H 0.075 0.925 32 H 0.069 0.931 33 H 0.065 0.935 34 H 0.074 0.926 35 H 0.417 0.583 36 H 0.077 0.923 37 H 0.387 0.613 38 H -0.252 1.252 39 H -0.248 1.248 40 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.891 -2.422 -0.051 7.304 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.070 4.070 3 C -0.169 4.169 4 C 0.381 3.619 5 O -0.395 6.395 6 N -0.381 5.381 7 C 0.041 3.959 8 H 0.113 0.887 9 C -0.162 4.162 10 C -0.147 4.147 11 C 0.044 3.956 12 H 0.074 0.926 13 O -0.373 6.373 14 C -0.188 4.188 15 C -0.166 4.166 16 N -0.118 5.118 17 C -0.045 4.045 18 C -0.169 4.169 19 O -0.357 6.357 20 Si 0.615 3.385 21 C -0.233 4.233 22 H 0.089 0.911 23 H 0.102 0.898 24 H 0.083 0.917 25 H 0.227 0.773 26 H 0.096 0.904 27 H 0.089 0.911 28 H 0.094 0.906 29 H 0.095 0.905 30 H 0.227 0.773 31 H 0.094 0.906 32 H 0.088 0.912 33 H 0.084 0.916 34 H 0.092 0.908 35 H 0.255 0.745 36 H 0.095 0.905 37 H 0.236 0.764 38 H -0.176 1.176 39 H -0.172 1.172 40 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 5.047 -2.277 0.499 5.559 hybrid contribution 0.864 0.763 -0.585 1.293 sum 5.911 -1.514 -0.085 6.103 Atomic orbital electron populations 1.20398 0.88729 1.03251 1.02616 1.19897 0.96088 0.90153 1.00853 1.20209 0.83443 0.93549 1.19743 1.16983 0.85889 0.82851 0.76172 1.90839 1.15842 1.83088 1.49771 1.45954 1.09221 1.06314 1.76589 1.21068 0.98827 0.79003 0.97002 0.88748 1.21772 0.98054 0.94448 1.01923 1.21397 1.02942 0.94636 0.95772 1.21847 0.95556 0.81337 0.96860 0.92641 1.86516 1.89862 1.26391 1.34577 1.22246 0.99885 0.94829 1.01812 1.21880 1.02187 0.96054 0.96494 1.41806 1.07183 1.06402 1.56401 1.19909 0.94972 0.82699 1.06918 1.24533 0.92115 1.09487 0.90798 1.86469 1.39807 1.67242 1.42186 0.95205 0.86243 0.75732 0.81291 1.20464 0.91054 0.98765 1.13026 0.91141 0.89832 0.91727 0.77326 0.90405 0.91078 0.90619 0.90451 0.77260 0.90598 0.91186 0.91613 0.90770 0.74541 0.90546 0.76413 1.17615 1.17169 0.83995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.31 9.83 36.01 0.35 0.04 16 2 C -0.06 -0.25 6.21 -104.16 -0.65 -0.90 16 3 C -0.06 -0.18 7.06 -81.98 -0.58 -0.76 16 4 C 0.59 2.00 7.75 -12.85 -0.10 1.90 16 5 O -0.52 -3.37 14.46 5.19 0.08 -3.29 16 6 N -0.73 -0.02 5.07 -55.11 -0.28 -0.29 16 7 C 0.15 0.00 2.45 -67.93 -0.17 -0.17 16 8 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 9 C -0.12 0.23 5.39 -26.73 -0.14 0.08 16 10 C -0.11 0.06 5.57 -26.73 -0.15 -0.09 16 11 C 0.10 -0.04 3.47 -26.73 -0.09 -0.13 16 12 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 13 O -0.57 -0.52 13.32 -35.23 -0.47 -0.99 16 14 C -0.15 0.06 5.55 -26.70 -0.15 -0.09 16 15 C -0.13 -0.01 5.50 -26.71 -0.15 -0.16 16 16 N -0.52 -0.47 5.99 -5.69 -0.03 -0.50 16 17 C 0.07 0.13 6.51 -81.95 -0.53 -0.40 16 18 C -0.06 0.08 3.07 36.01 0.11 0.19 16 19 O -0.55 0.82 12.86 -35.23 -0.45 0.37 16 20 Si 0.72 -1.52 30.54 -169.99 -5.19 -6.71 16 21 C -0.21 -0.68 9.27 -39.98 -0.37 -1.05 16 22 H 0.07 0.22 8.14 -51.93 -0.42 -0.21 16 23 H 0.08 0.38 6.49 -51.93 -0.34 0.04 16 24 H 0.06 0.12 8.14 -51.93 -0.42 -0.30 16 25 H 0.39 -1.02 7.73 -40.82 -0.32 -1.34 16 26 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 27 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 28 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 29 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.38 -1.09 9.08 45.56 0.41 -0.68 16 31 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 34 H 0.07 0.16 8.14 -51.93 -0.42 -0.27 16 35 H 0.42 -0.84 8.19 -40.82 -0.33 -1.18 16 36 H 0.08 -0.26 7.96 -51.93 -0.41 -0.67 16 37 H 0.39 -2.53 8.74 45.56 0.40 -2.13 16 38 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 39 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 40 H 0.14 0.34 6.17 -52.48 -0.32 0.01 16 LS Contribution 325.58 15.07 4.91 4.91 Total: 0.00 -9.32 325.58 -9.21 -18.53 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -5.15 Total: -10.50 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -2.61 Total: -1.52 kcal Atomic # 7 Polarization: -0.48 SS G_CDS: -0.31 Total: -0.80 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.85 Total: -3.91 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.19 Total: -6.71 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -9.32 -9.21 -18.53 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_13940406.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.482 kcal (2) G-P(sol) polarization free energy of solvation -9.324 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.806 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.211 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.534 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.016 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds