Wall clock time and date at job start Sat Mar 6 2021 15:01:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47256 * 2 1 4 4 C 1.50699 * 109.46964 * 239.99985 * 2 1 3 5 5 C 1.34852 * 125.89102 * 120.02063 * 4 2 1 6 6 C 1.40891 * 107.41833 * 179.97438 * 5 4 2 7 7 C 1.34848 * 107.41488 * 0.02562 * 6 5 4 8 8 C 1.50702 * 125.88637 * 180.02562 * 7 6 5 9 9 C 1.50703 * 109.47235 * 84.97741 * 8 7 6 10 10 O 1.21278 * 119.99808 * 359.97438 * 9 8 7 11 11 N 1.34774 * 120.00048 * 180.02562 * 9 8 7 12 12 C 1.46502 * 119.99962 * 179.97438 * 11 9 8 13 13 H 1.09008 * 109.46893 * 34.99535 * 12 11 9 14 14 C 1.52997 * 109.47121 * 154.99549 * 12 11 9 15 15 C 1.53004 * 109.46852 * 179.97438 * 14 12 11 16 16 C 1.53001 * 109.47185 * 299.99912 * 15 14 12 17 17 H 1.08995 * 109.47219 * 299.99970 * 16 15 14 18 18 O 1.42900 * 109.47004 * 179.97438 * 16 15 14 19 19 C 1.53003 * 109.46863 * 60.00259 * 16 15 14 20 20 C 1.52995 * 109.46687 * 274.99711 * 12 11 9 21 21 N 1.36340 * 125.89231 * 299.72083 * 4 2 1 22 22 H 0.96698 * 113.99898 * 59.99565 * 1 2 3 23 23 H 1.09002 * 109.47259 * 120.00198 * 2 1 3 24 24 H 1.48503 * 110.00152 * 60.00114 * 3 2 1 25 25 H 1.48498 * 110.00118 * 181.32340 * 3 2 1 26 26 H 1.07998 * 126.29089 * 0.02743 * 5 4 2 27 27 H 1.08003 * 126.29148 * 180.02562 * 6 5 4 28 28 H 1.09007 * 109.47002 * 204.97165 * 8 7 6 29 29 H 1.08995 * 109.47409 * 324.96979 * 8 7 6 30 30 H 0.96994 * 119.99806 * 359.97438 * 11 9 8 31 31 H 1.09001 * 109.47102 * 299.99985 * 14 12 11 32 32 H 1.08995 * 109.47305 * 59.99945 * 14 12 11 33 33 H 1.09000 * 109.47136 * 60.00734 * 15 14 12 34 34 H 1.09000 * 109.46901 * 180.02562 * 15 14 12 35 35 H 0.96695 * 113.99875 * 180.02562 * 18 16 15 36 36 H 1.09003 * 109.47136 * 59.99973 * 19 16 15 37 37 H 1.09001 * 109.46811 * 179.97438 * 19 16 15 38 38 H 1.08992 * 109.47558 * 299.99777 * 20 12 11 39 39 H 1.09000 * 109.47328 * 60.00081 * 20 12 11 40 40 H 0.97000 * 125.63301 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7101 -0.1728 -2.1912 6 6 2.9454 -1.1749 -3.1532 7 6 2.3010 -2.2865 -2.7440 8 6 2.2760 -3.6093 -3.4656 9 6 3.4944 -4.4112 -3.0868 10 8 4.3036 -3.9535 -2.3080 11 7 3.6853 -5.6367 -3.6144 12 6 4.8701 -6.4160 -3.2466 13 1 5.1222 -6.2236 -2.2037 14 6 4.5787 -7.9062 -3.4343 15 6 5.8162 -8.7201 -3.0508 16 6 6.9906 -8.3137 -3.9433 17 1 6.7381 -8.5060 -4.9860 18 8 8.1466 -9.0734 -3.5847 19 6 7.2820 -6.8234 -3.7556 20 6 6.0448 -6.0097 -4.1387 21 7 1.6814 -2.0092 -1.5616 22 1 -0.3933 0.4418 -0.7650 23 1 1.7923 -0.5139 0.8900 24 1 1.5616 2.4679 1.2085 25 1 3.5346 1.7703 -0.0322 26 1 3.0853 0.8396 -2.2178 27 1 3.5338 -1.0717 -4.0529 28 1 1.3775 -4.1592 -3.1852 29 1 2.2749 -3.4362 -4.5417 30 1 3.0383 -6.0026 -4.2375 31 1 3.7417 -8.1956 -2.7988 32 1 4.3265 -8.0986 -4.4771 33 1 6.0687 -8.5278 -2.0080 34 1 5.6088 -9.7817 -3.1849 35 1 8.9314 -8.8673 -4.1107 36 1 7.5345 -6.6311 -2.7128 37 1 8.1189 -6.5340 -4.3911 38 1 5.7927 -6.2021 -5.1815 39 1 6.2523 -4.9480 -4.0049 40 1 1.1492 -2.6323 -1.0426 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_14644196.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:15 Heat of formation + Delta-G solvation = -84.790476 kcal Electronic energy + Delta-G solvation = -21980.133557 eV Core-core repulsion = 18568.382373 eV Total energy + Delta-G solvation = -3411.751184 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.28814 -41.00698 -39.53083 -37.68565 -36.98071 -34.50303 -33.08152 -31.97194 -31.84726 -30.03757 -28.68308 -25.20487 -23.96634 -23.33810 -21.68487 -21.31551 -21.24263 -20.78230 -18.93500 -18.31108 -18.11920 -17.56399 -16.80294 -16.42294 -16.22304 -15.99819 -15.58811 -15.28960 -14.96565 -14.81762 -14.53695 -14.37262 -14.11880 -13.98032 -13.76783 -13.64515 -13.41220 -13.32480 -13.00574 -12.84248 -12.46237 -12.26589 -11.99731 -11.87787 -11.82299 -11.37481 -10.92755 -10.79021 -10.60278 -10.10309 -9.70528 -8.88552 -4.95229 1.16995 1.29059 1.62929 1.73851 1.91472 2.01708 2.26628 2.51928 3.13814 3.46553 3.49667 3.61218 3.64044 3.84380 3.89147 3.94976 3.99449 4.07371 4.10697 4.19266 4.31161 4.33932 4.36930 4.46064 4.56110 4.60184 4.74661 4.83016 4.88009 4.93539 5.00191 5.03848 5.16373 5.25673 5.33020 5.36333 5.43959 6.06467 6.21064 6.41988 6.53739 6.64998 6.67440 7.21506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.721 3.279 4 C -0.010 4.010 5 C -0.188 4.188 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.072 4.072 9 C 0.511 3.489 10 O -0.522 6.522 11 N -0.730 5.730 12 C 0.143 3.857 13 H 0.089 0.911 14 C -0.123 4.123 15 C -0.110 4.110 16 C 0.103 3.897 17 H 0.056 0.944 18 O -0.568 6.568 19 C -0.150 4.150 20 C -0.126 4.126 21 N -0.535 5.535 22 H 0.381 0.619 23 H 0.110 0.890 24 H -0.256 1.256 25 H -0.255 1.255 26 H 0.141 0.859 27 H 0.136 0.864 28 H 0.099 0.901 29 H 0.117 0.883 30 H 0.401 0.599 31 H 0.077 0.923 32 H 0.072 0.928 33 H 0.074 0.926 34 H 0.076 0.924 35 H 0.380 0.620 36 H 0.074 0.926 37 H 0.069 0.931 38 H 0.066 0.934 39 H 0.072 0.928 40 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.025 -1.015 -5.768 6.592 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.621 3.379 4 C -0.123 4.123 5 C -0.213 4.213 6 C -0.198 4.198 7 C -0.078 4.078 8 C -0.113 4.113 9 C 0.297 3.703 10 O -0.397 6.397 11 N -0.382 5.382 12 C 0.039 3.961 13 H 0.107 0.893 14 C -0.161 4.161 15 C -0.148 4.148 16 C 0.044 3.956 17 H 0.074 0.926 18 O -0.374 6.374 19 C -0.189 4.189 20 C -0.165 4.165 21 N -0.130 5.130 22 H 0.229 0.771 23 H 0.127 0.873 24 H -0.181 1.181 25 H -0.179 1.179 26 H 0.159 0.841 27 H 0.154 0.846 28 H 0.118 0.882 29 H 0.135 0.865 30 H 0.235 0.765 31 H 0.095 0.905 32 H 0.090 0.910 33 H 0.092 0.908 34 H 0.095 0.905 35 H 0.227 0.773 36 H 0.092 0.908 37 H 0.088 0.912 38 H 0.085 0.915 39 H 0.091 0.909 40 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges -2.372 -0.739 -3.678 4.438 hybrid contribution -0.021 -0.973 -0.434 1.066 sum -2.393 -1.712 -4.112 5.056 Atomic orbital electron populations 1.86477 1.17448 1.81780 1.49518 1.24848 0.84830 1.10748 0.95602 0.94140 0.81022 0.76307 0.86453 1.20820 1.06123 0.85459 0.99937 1.20651 1.04439 1.00070 0.96115 1.20581 1.04689 0.92660 1.01833 1.19472 1.02952 0.95763 0.89609 1.20138 0.97259 0.91790 1.02088 1.20630 0.87605 0.81382 0.80730 1.90773 1.45591 1.69265 1.34023 1.46074 1.25871 1.17676 1.48627 1.21023 0.84749 0.90020 1.00304 0.89257 1.21763 0.98379 0.93269 1.02717 1.21407 0.92605 1.00395 1.00432 1.21846 0.86267 0.89668 0.97791 0.92587 1.86517 1.21422 1.65148 1.64312 1.22234 0.98109 0.95338 1.03173 1.21845 0.94235 1.00805 0.99630 1.41781 1.41549 1.10829 1.18812 0.77145 0.87274 1.18107 1.17933 0.84121 0.84618 0.88227 0.86460 0.76530 0.90483 0.90958 0.90774 0.90492 0.77270 0.90764 0.91226 0.91529 0.90891 0.75115 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.28 12.88 -35.23 -0.45 -0.73 16 2 C -0.05 -0.04 3.08 36.01 0.11 0.07 16 3 Si 0.72 -0.25 30.58 -169.99 -5.20 -5.45 16 4 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.39 9.37 -39.78 -0.37 -0.76 16 6 C -0.17 -0.40 10.76 -39.78 -0.43 -0.83 16 7 C 0.04 0.05 5.66 -81.79 -0.46 -0.41 16 8 C -0.07 0.13 6.24 -29.03 -0.18 -0.05 16 9 C 0.51 0.41 7.79 -10.99 -0.09 0.32 16 10 O -0.52 -2.98 15.70 5.56 0.09 -2.90 16 11 N -0.73 1.32 5.08 -53.81 -0.27 1.05 16 12 C 0.14 -0.10 2.45 -67.93 -0.17 -0.27 16 13 H 0.09 0.17 7.58 -51.92 -0.39 -0.23 16 14 C -0.12 0.28 5.39 -26.73 -0.14 0.14 16 15 C -0.11 0.08 5.57 -26.73 -0.15 -0.07 16 16 C 0.10 -0.06 3.47 -26.73 -0.09 -0.15 16 17 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 18 O -0.57 -0.48 13.32 -35.23 -0.47 -0.95 16 19 C -0.15 0.09 5.54 -26.75 -0.15 -0.06 16 20 C -0.13 0.07 5.49 -26.76 -0.15 -0.08 16 21 N -0.54 -0.72 6.07 -5.44 -0.03 -0.75 16 22 H 0.38 -1.23 8.70 45.56 0.40 -0.84 16 23 H 0.11 0.15 7.96 -51.93 -0.41 -0.26 16 24 H -0.26 -0.64 7.11 56.52 0.40 -0.23 16 25 H -0.25 -0.64 7.11 56.52 0.40 -0.23 16 26 H 0.14 0.05 6.22 -52.49 -0.33 -0.28 16 27 H 0.14 0.16 8.06 -52.48 -0.42 -0.27 16 28 H 0.10 -0.41 8.14 -51.92 -0.42 -0.83 16 29 H 0.12 -0.47 8.14 -51.93 -0.42 -0.90 16 30 H 0.40 -1.92 8.60 -40.82 -0.35 -2.27 16 31 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 32 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 33 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 34 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.38 -1.13 9.08 45.56 0.41 -0.71 16 36 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 37 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 38 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 39 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 40 H 0.41 -0.09 8.96 -40.82 -0.37 -0.45 16 LS Contribution 329.90 15.07 4.97 4.97 Total: 0.00 -9.84 329.90 -9.48 -19.32 By element: Atomic # 1 Polarization: -6.57 SS G_CDS: -5.31 Total: -11.88 kcal Atomic # 6 Polarization: 0.11 SS G_CDS: -2.80 Total: -2.69 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: -0.31 Total: 0.30 kcal Atomic # 8 Polarization: -3.74 SS G_CDS: -0.84 Total: -4.57 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.20 Total: -5.45 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -9.84 -9.48 -19.32 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_14644196.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.468 kcal (2) G-P(sol) polarization free energy of solvation -9.842 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.311 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.480 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.322 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds