Wall clock time and date at job start Sat Mar 6 2021 15:01:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.46840 * 2 1 4 4 C 1.50700 * 109.47042 * 119.99604 * 2 1 3 5 5 C 1.31120 * 118.54732 * 342.14613 * 4 2 1 6 6 N 1.38924 * 121.84728 * 179.57044 * 5 4 2 7 7 C 1.47028 * 118.88213 * 13.33512 * 6 5 4 8 8 C 1.53459 * 107.51111 * 316.24556 * 7 6 5 9 9 C 1.50207 * 118.54784 * 162.12133 * 4 2 1 10 10 C 1.50700 * 109.32592 * 320.31479 * 9 4 2 11 11 O 1.21282 * 119.99929 * 276.74255 * 10 9 4 12 12 N 1.34777 * 120.00171 * 96.74810 * 10 9 4 13 13 C 1.46498 * 120.00351 * 179.97438 * 12 10 9 14 14 H 1.08994 * 109.47375 * 325.00266 * 13 12 10 15 15 C 1.53009 * 109.46954 * 84.99991 * 13 12 10 16 16 C 1.52997 * 109.47057 * 179.97438 * 15 13 12 17 17 C 1.52995 * 109.47196 * 300.00242 * 16 15 13 18 18 H 1.09003 * 109.47441 * 299.99732 * 17 16 15 19 19 O 1.42901 * 109.46973 * 179.97438 * 17 16 15 20 20 C 1.52995 * 109.47368 * 59.99918 * 17 16 15 21 21 C 1.52989 * 109.47169 * 299.99994 * 20 17 16 22 22 H 0.96699 * 114.00157 * 182.01704 * 1 2 3 23 23 H 1.08994 * 109.47339 * 240.00086 * 2 1 3 24 24 H 1.48501 * 109.99807 * 179.97438 * 3 2 1 25 25 H 1.48497 * 110.00369 * 301.31557 * 3 2 1 26 26 H 1.07995 * 119.07213 * 359.59232 * 5 4 2 27 27 H 0.96993 * 120.55507 * 193.35822 * 6 5 4 28 28 H 1.08998 * 109.82398 * 75.87855 * 7 6 5 29 29 H 1.09003 * 109.81765 * 196.73047 * 7 6 5 30 30 H 1.08995 * 109.71913 * 301.38553 * 8 7 6 31 31 H 1.09002 * 109.47600 * 180.85541 * 8 7 6 32 32 H 1.08999 * 109.32732 * 79.96612 * 9 4 2 33 33 H 0.97000 * 119.99701 * 359.97438 * 12 10 9 34 34 H 1.08995 * 109.47053 * 300.00646 * 15 13 12 35 35 H 1.09003 * 109.47057 * 59.99999 * 15 13 12 36 36 H 1.09008 * 109.46769 * 179.97438 * 16 15 13 37 37 H 1.09003 * 109.46707 * 60.00423 * 16 15 13 38 38 H 0.96705 * 113.99792 * 60.00002 * 19 17 16 39 39 H 1.09003 * 109.47032 * 60.00094 * 20 17 16 40 40 H 1.09000 * 109.47421 * 179.97438 * 20 17 16 41 41 H 1.09007 * 109.47369 * 179.97438 * 21 20 17 42 42 H 1.08994 * 109.47361 * 299.99817 * 21 20 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.1066 -0.8825 2.2352 6 7 1.4945 -1.5354 3.3984 7 6 2.9252 -1.7823 3.6309 8 6 3.5281 -2.2811 2.3108 9 6 3.3545 -1.1902 1.2516 10 6 3.7130 -1.7475 -0.1019 11 8 3.4209 -2.8903 -0.3839 12 7 4.3585 -0.9760 -0.9989 13 6 4.7076 -1.5179 -2.3144 14 1 4.9618 -2.5733 -2.2169 15 6 3.5153 -1.3660 -3.2613 16 6 3.8800 -1.9313 -4.6354 17 6 5.0796 -1.1672 -5.1992 18 1 4.8251 -0.1118 -5.2965 19 8 5.4206 -1.6957 -6.4824 20 6 6.2718 -1.3191 -4.2524 21 6 5.9071 -0.7538 -2.8784 22 1 -0.3933 -0.8828 0.0311 23 1 1.7924 -0.5138 -0.8899 24 1 3.5349 1.7702 0.0006 25 1 1.5354 2.4772 -1.1921 26 1 0.0973 -0.5066 2.1559 27 1 0.8327 -1.8239 4.0462 28 1 3.4146 -0.8581 3.9380 29 1 3.0485 -2.5403 4.4044 30 1 3.0137 -3.1872 1.9907 31 1 4.5888 -2.4893 2.4514 32 1 4.0138 -0.3539 1.4836 33 1 4.5919 -0.0619 -0.7734 34 1 2.6605 -1.9099 -2.8593 35 1 3.2609 -0.3105 -3.3589 36 1 3.0304 -1.8235 -5.3098 37 1 4.1345 -2.9867 -4.5381 38 1 4.7098 -1.6329 -7.1351 39 1 6.5264 -2.3745 -4.1552 40 1 7.1266 -0.7751 -4.6543 41 1 6.7564 -0.8624 -2.2037 42 1 5.6526 0.3016 -2.9756 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_15608500.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:21 Heat of formation + Delta-G solvation = -113.600596 kcal Electronic energy + Delta-G solvation = -23928.689085 eV Core-core repulsion = 20488.377122 eV Total energy + Delta-G solvation = -3440.311963 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.162 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.60256 -40.18451 -39.03610 -37.54279 -36.93082 -34.53091 -33.47708 -32.35301 -31.95988 -29.53481 -27.05815 -26.09758 -23.95062 -23.36335 -23.00553 -21.56764 -21.03415 -19.31912 -18.84799 -18.26667 -18.03404 -17.92974 -17.33147 -16.40501 -16.10328 -15.73437 -15.57963 -15.27141 -15.12910 -15.00798 -14.53020 -14.47457 -14.35821 -13.92542 -13.82824 -13.40335 -13.31793 -13.18669 -13.06438 -12.52166 -12.47611 -12.28322 -12.24110 -12.09682 -11.80573 -11.61651 -11.35598 -11.12878 -11.00409 -10.85474 -10.59882 -10.06262 -8.33911 -4.85579 1.21724 1.52013 1.62443 1.72780 2.07578 2.23003 2.58112 3.14994 3.49359 3.55466 3.62294 3.69983 3.84467 3.94907 3.98868 4.06406 4.10993 4.12707 4.21184 4.22844 4.32141 4.35015 4.41563 4.46348 4.51470 4.57781 4.68256 4.72660 4.76627 4.90171 4.95296 5.01316 5.04536 5.16960 5.21238 5.26082 5.27590 5.43808 5.48146 6.35508 6.46980 6.59467 6.65910 6.83470 7.26523 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.052 4.052 3 Si 0.739 3.261 4 C -0.293 4.293 5 C 0.164 3.836 6 N -0.751 5.751 7 C 0.121 3.879 8 C -0.124 4.124 9 C -0.042 4.042 10 C 0.525 3.475 11 O -0.532 6.532 12 N -0.733 5.733 13 C 0.141 3.859 14 H 0.092 0.908 15 C -0.128 4.128 16 C -0.149 4.149 17 C 0.103 3.897 18 H 0.055 0.945 19 O -0.567 6.567 20 C -0.109 4.109 21 C -0.125 4.125 22 H 0.365 0.635 23 H 0.063 0.937 24 H -0.254 1.254 25 H -0.259 1.259 26 H 0.145 0.855 27 H 0.403 0.597 28 H 0.062 0.938 29 H 0.082 0.918 30 H 0.085 0.915 31 H 0.076 0.924 32 H 0.085 0.915 33 H 0.398 0.602 34 H 0.072 0.928 35 H 0.064 0.936 36 H 0.069 0.931 37 H 0.075 0.925 38 H 0.380 0.620 39 H 0.074 0.926 40 H 0.077 0.923 41 H 0.078 0.922 42 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.242 2.969 3.784 4.816 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.162 4.162 3 Si 0.639 3.361 4 C -0.304 4.304 5 C 0.042 3.958 6 N -0.380 5.380 7 C -0.004 4.004 8 C -0.163 4.163 9 C -0.063 4.063 10 C 0.312 3.688 11 O -0.408 6.408 12 N -0.386 5.386 13 C 0.037 3.963 14 H 0.110 0.890 15 C -0.167 4.167 16 C -0.187 4.187 17 C 0.044 3.956 18 H 0.073 0.927 19 O -0.373 6.373 20 C -0.147 4.147 21 C -0.163 4.163 22 H 0.213 0.787 23 H 0.080 0.920 24 H -0.179 1.179 25 H -0.183 1.183 26 H 0.163 0.837 27 H 0.237 0.763 28 H 0.081 0.919 29 H 0.100 0.900 30 H 0.103 0.897 31 H 0.094 0.906 32 H 0.103 0.897 33 H 0.233 0.767 34 H 0.090 0.910 35 H 0.082 0.918 36 H 0.088 0.912 37 H 0.093 0.907 38 H 0.227 0.773 39 H 0.093 0.907 40 H 0.095 0.905 41 H 0.097 0.903 42 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 0.827 3.246 3.460 4.816 hybrid contribution -0.698 -1.114 -0.588 1.440 sum 0.129 2.132 2.873 3.579 Atomic orbital electron populations 1.86692 1.17738 1.33458 1.97042 1.25093 0.83898 1.11665 0.95568 0.92711 0.78450 0.77471 0.87506 1.20262 0.96216 1.15430 0.98499 1.20369 0.98570 0.91587 0.85320 1.44602 1.07057 1.64348 1.22043 1.21576 0.81642 1.00444 0.96703 1.21766 1.01855 0.98409 0.94243 1.19673 0.95676 0.98594 0.92389 1.20612 0.76392 0.85750 0.86047 1.90700 1.52690 1.18175 1.79224 1.46357 1.60314 1.16593 1.15292 1.21049 0.94049 0.99607 0.81590 0.88975 1.21878 0.98605 1.01513 0.94658 1.22229 0.98457 1.01412 0.96631 1.21843 0.94264 0.96064 0.83420 0.92655 1.86518 1.43935 1.85166 1.21701 1.21395 0.97560 1.02812 0.92949 1.21775 0.97782 1.00056 0.96650 0.78719 0.91967 1.17871 1.18334 0.83742 0.76318 0.91935 0.90005 0.89663 0.90572 0.89731 0.76704 0.90951 0.91768 0.91241 0.90658 0.77298 0.90683 0.90467 0.90321 0.91144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.34 11.28 -35.23 -0.40 -0.74 16 2 C -0.05 -0.03 2.49 36.01 0.09 0.06 16 3 Si 0.74 -0.17 32.74 -169.99 -5.56 -5.73 16 4 C -0.29 -0.05 4.08 -101.34 -0.41 -0.46 16 5 C 0.16 -0.14 10.10 -16.08 -0.16 -0.30 16 6 N -0.75 1.34 5.83 -60.73 -0.35 0.99 16 7 C 0.12 -0.24 7.16 -3.52 -0.03 -0.26 16 8 C -0.12 0.00 5.30 -26.48 -0.14 -0.14 16 9 C -0.04 -0.02 2.32 -93.14 -0.22 -0.23 16 10 C 0.53 1.26 5.19 -10.99 -0.06 1.20 16 11 O -0.53 -3.31 15.78 5.56 0.09 -3.22 16 12 N -0.73 -0.34 4.89 -53.80 -0.26 -0.60 16 13 C 0.14 0.08 2.46 -67.93 -0.17 -0.09 16 14 H 0.09 0.23 7.58 -51.93 -0.39 -0.16 16 15 C -0.13 -0.09 5.49 -26.73 -0.15 -0.23 16 16 C -0.15 -0.02 5.54 -26.74 -0.15 -0.17 16 17 C 0.10 0.02 3.47 -26.74 -0.09 -0.07 16 18 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 19 O -0.57 -0.75 13.32 -35.23 -0.47 -1.22 16 20 C -0.11 0.00 5.57 -26.74 -0.15 -0.15 16 21 C -0.12 0.13 5.39 -26.74 -0.14 -0.01 16 22 H 0.36 -0.57 8.72 45.56 0.40 -0.17 16 23 H 0.06 0.12 6.46 -51.93 -0.34 -0.21 16 24 H -0.25 0.10 6.59 56.52 0.37 0.47 16 25 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 26 H 0.15 -0.30 6.77 -52.49 -0.36 -0.65 16 27 H 0.40 -1.39 8.96 -40.82 -0.37 -1.76 16 28 H 0.06 -0.15 8.14 -51.93 -0.42 -0.57 16 29 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 30 H 0.08 0.21 7.52 -51.93 -0.39 -0.18 16 31 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 -0.09 7.99 -51.93 -0.41 -0.51 16 33 H 0.40 -0.45 7.72 -40.82 -0.32 -0.76 16 34 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 35 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.07 -0.04 8.14 -51.92 -0.42 -0.47 16 37 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 38 H 0.38 -0.93 9.08 45.56 0.41 -0.52 16 39 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 40 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 42 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 LS Contribution 330.59 15.07 4.98 4.98 Total: 0.00 -6.89 330.59 -9.81 -16.70 By element: Atomic # 1 Polarization: -4.23 SS G_CDS: -6.06 Total: -10.29 kcal Atomic # 6 Polarization: 0.91 SS G_CDS: -1.77 Total: -0.86 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.62 Total: 0.38 kcal Atomic # 8 Polarization: -4.40 SS G_CDS: -0.78 Total: -5.18 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.56 Total: -5.73 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -6.89 -9.81 -16.70 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_15608500.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.900 kcal (2) G-P(sol) polarization free energy of solvation -6.891 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.810 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.700 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.601 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds