Wall clock time and date at job start Sat Mar 6 2021 15:01:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47082 * 2 1 4 4 C 1.50697 * 109.47393 * 239.99839 * 2 1 3 5 5 C 1.38715 * 120.02923 * 285.00093 * 4 2 1 6 6 O 1.35905 * 120.05074 * 359.97438 * 5 4 2 7 7 C 1.42901 * 116.99604 * 179.72595 * 6 5 4 8 8 C 1.50704 * 109.46992 * 179.97438 * 7 6 5 9 9 O 1.21274 * 119.99890 * 359.97438 * 8 7 6 10 10 N 1.34776 * 119.99647 * 179.97438 * 8 7 6 11 11 C 1.46500 * 119.99752 * 179.97438 * 10 8 7 12 12 H 1.08998 * 109.47072 * 34.99881 * 11 10 8 13 13 C 1.52996 * 109.47308 * 155.00252 * 11 10 8 14 14 C 1.52998 * 109.47362 * 180.02562 * 13 11 10 15 15 C 1.52999 * 109.46965 * 299.99782 * 14 13 11 16 16 H 1.09003 * 109.47308 * 300.00062 * 15 14 13 17 17 O 1.42902 * 109.47439 * 180.02562 * 15 14 13 18 18 C 1.53000 * 109.47223 * 59.99801 * 15 14 13 19 19 C 1.52998 * 109.47157 * 300.00348 * 18 15 14 20 20 C 1.38751 * 119.88999 * 179.72445 * 5 4 2 21 21 C 1.38121 * 119.94246 * 0.27515 * 20 5 4 22 22 C 1.38282 * 120.05845 * 0.02562 * 21 20 5 23 23 C 1.38164 * 120.03119 * 105.32306 * 4 2 1 24 24 H 0.96700 * 114.00374 * 300.00197 * 1 2 3 25 25 H 1.09003 * 109.46970 * 119.99964 * 2 1 3 26 26 H 1.48507 * 109.99936 * 178.67675 * 3 2 1 27 27 H 1.48506 * 110.00320 * 299.99696 * 3 2 1 28 28 H 1.08996 * 109.47352 * 299.99771 * 7 6 5 29 29 H 1.08999 * 109.47144 * 59.99795 * 7 6 5 30 30 H 0.96995 * 120.00267 * 0.02562 * 10 8 7 31 31 H 1.09003 * 109.46887 * 300.00145 * 13 11 10 32 32 H 1.08998 * 109.47357 * 59.99803 * 13 11 10 33 33 H 1.08998 * 109.47257 * 59.99483 * 14 13 11 34 34 H 1.08997 * 109.47464 * 179.97438 * 14 13 11 35 35 H 0.96702 * 114.00317 * 179.97438 * 17 15 14 36 36 H 1.08998 * 109.47087 * 60.00246 * 18 15 14 37 37 H 1.09003 * 109.47207 * 179.97438 * 18 15 14 38 38 H 1.09003 * 109.46941 * 299.99474 * 19 18 15 39 39 H 1.08997 * 109.46771 * 180.02562 * 19 18 15 40 40 H 1.08002 * 120.02961 * 180.29868 * 20 5 4 41 41 H 1.08007 * 119.96925 * 180.02562 * 21 20 5 42 42 H 1.08002 * 119.94739 * 179.97438 * 22 21 20 43 43 H 1.08003 * 119.96792 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.8698 -2.0941 -1.3069 6 8 1.3568 -2.8107 -0.2723 7 6 1.3191 -4.2313 -0.4229 8 6 0.7237 -4.8519 0.8146 9 8 0.3672 -4.1472 1.7350 10 7 0.5873 -6.1901 0.8984 11 6 0.0090 -6.7935 2.1016 12 1 -0.7655 -6.1384 2.5003 13 6 -0.6030 -8.1504 1.7480 14 6 -1.2076 -8.7803 3.0044 15 6 -0.1126 -8.9732 4.0555 16 1 0.6620 -9.6285 3.6573 17 8 -0.6771 -9.5620 5.2289 18 6 0.4995 -7.6163 4.4092 19 6 1.1039 -6.9864 3.1527 20 6 2.3279 -2.7448 -2.4435 21 6 2.8492 -2.0142 -3.4933 22 6 2.9153 -0.6353 -3.4121 23 6 2.4599 0.0154 -2.2805 24 1 -0.3934 0.4417 0.7650 25 1 1.7923 -0.5138 0.8900 26 1 3.5346 1.7702 0.0322 27 1 1.5615 2.4679 -1.2086 28 1 0.7089 -4.4888 -1.2885 29 1 2.3316 -4.6084 -0.5669 30 1 0.8728 -6.7538 0.1625 31 1 -1.3834 -8.0130 0.9994 32 1 0.1715 -8.8056 1.3493 33 1 -1.9821 -8.1250 3.4027 34 1 -1.6440 -9.7468 2.7524 35 1 -0.0384 -9.7139 5.9390 36 1 -0.2751 -6.9610 4.8075 37 1 1.2792 -7.7536 5.1584 38 1 1.8786 -7.6417 2.7545 39 1 1.5404 -6.0200 3.4049 40 1 2.2765 -3.8217 -2.5074 41 1 3.2056 -2.5203 -4.3784 42 1 3.3237 -0.0658 -4.2339 43 1 2.5126 1.0924 -2.2195 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_2989392.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:28 Heat of formation + Delta-G solvation = -126.986025 kcal Electronic energy + Delta-G solvation = -25406.494165 eV Core-core repulsion = 21611.430823 eV Total energy + Delta-G solvation = -3795.063342 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.64949 -40.94460 -39.64826 -38.41130 -37.34197 -36.96629 -34.57419 -32.88554 -31.99266 -31.43464 -30.32299 -28.42519 -26.56798 -24.03454 -23.96039 -22.99594 -22.44703 -21.59699 -21.01874 -19.35439 -18.46797 -18.25288 -18.22887 -17.43739 -17.37019 -17.05274 -16.77648 -16.22927 -15.68629 -15.62945 -15.52828 -15.26224 -14.96644 -14.74977 -14.66871 -14.25854 -13.96110 -13.72170 -13.55422 -13.44096 -13.35206 -13.10153 -12.92700 -12.68862 -12.53329 -12.29143 -12.18775 -11.85874 -11.85190 -11.70509 -11.39264 -10.93224 -10.80195 -10.19363 -10.11605 -10.01265 -9.23160 -4.90548 0.17888 0.38018 1.37473 1.41884 1.48249 1.70109 2.01562 2.50930 2.63072 3.12019 3.41399 3.50138 3.55139 3.58827 3.71502 3.80134 3.87996 3.89856 3.91675 4.02577 4.08657 4.09015 4.17382 4.22567 4.28823 4.30019 4.32636 4.46519 4.53420 4.60950 4.73016 4.85333 4.91161 4.93604 4.98355 5.02584 5.14018 5.21780 5.22198 5.30315 5.35531 5.44275 5.64501 6.20866 6.36018 6.64453 6.82838 7.08226 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.102 4.102 5 C 0.153 3.847 6 O -0.277 6.277 7 C 0.038 3.962 8 C 0.517 3.483 9 O -0.508 6.508 10 N -0.725 5.725 11 C 0.145 3.855 12 H 0.093 0.907 13 C -0.123 4.123 14 C -0.110 4.110 15 C 0.103 3.897 16 H 0.056 0.944 17 O -0.568 6.568 18 C -0.150 4.150 19 C -0.128 4.128 20 C -0.211 4.211 21 C -0.072 4.072 22 C -0.151 4.151 23 C -0.084 4.084 24 H 0.380 0.620 25 H 0.074 0.926 26 H -0.255 1.255 27 H -0.250 1.250 28 H 0.094 0.906 29 H 0.093 0.907 30 H 0.402 0.598 31 H 0.078 0.922 32 H 0.072 0.928 33 H 0.075 0.925 34 H 0.077 0.923 35 H 0.380 0.620 36 H 0.075 0.925 37 H 0.070 0.930 38 H 0.066 0.934 39 H 0.073 0.927 40 H 0.132 0.868 41 H 0.131 0.869 42 H 0.129 0.871 43 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.598 -3.050 -1.034 4.138 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.173 4.173 3 Si 0.584 3.416 4 C -0.103 4.103 5 C 0.107 3.893 6 O -0.189 6.189 7 C -0.041 4.041 8 C 0.302 3.698 9 O -0.381 6.381 10 N -0.379 5.379 11 C 0.041 3.959 12 H 0.111 0.889 13 C -0.161 4.161 14 C -0.148 4.148 15 C 0.044 3.956 16 H 0.074 0.926 17 O -0.374 6.374 18 C -0.188 4.188 19 C -0.166 4.166 20 C -0.229 4.229 21 C -0.090 4.090 22 C -0.169 4.169 23 C -0.102 4.102 24 H 0.227 0.773 25 H 0.092 0.908 26 H -0.180 1.180 27 H -0.175 1.175 28 H 0.112 0.888 29 H 0.111 0.889 30 H 0.236 0.764 31 H 0.097 0.903 32 H 0.091 0.909 33 H 0.094 0.906 34 H 0.096 0.904 35 H 0.227 0.773 36 H 0.094 0.906 37 H 0.088 0.912 38 H 0.085 0.915 39 H 0.091 0.909 40 H 0.149 0.851 41 H 0.149 0.851 42 H 0.147 0.853 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 2.284 -2.127 -1.507 3.466 hybrid contribution 0.907 -1.093 -0.485 1.501 sum 3.191 -3.221 -1.992 4.952 Atomic orbital electron populations 1.86498 1.17052 1.81933 1.49247 1.24517 0.85964 1.09646 0.97130 0.95219 0.80821 0.78469 0.87052 1.18685 1.04485 0.90382 0.96752 1.18748 0.93034 0.90684 0.86844 1.86213 1.77520 1.16872 1.38274 1.22489 1.02488 0.81407 0.97703 1.20000 0.79099 0.82488 0.88227 1.90782 1.47261 1.61046 1.39021 1.45882 1.65216 1.06257 1.20550 1.21072 0.95801 0.94459 0.84554 0.88865 1.21767 1.01040 0.95078 0.98261 1.21404 0.97891 1.02079 0.93455 1.21848 0.95011 0.92576 0.86163 0.92618 1.86521 1.40394 1.83805 1.26635 1.22237 1.01131 0.97594 0.97860 1.21869 0.98021 1.01767 0.94982 1.21289 1.06408 1.00485 0.94748 1.21014 0.96339 0.93914 0.97778 1.21036 1.02838 0.94728 0.98282 1.20879 0.97326 0.99240 0.92710 0.77279 0.90795 1.17952 1.17531 0.88791 0.88902 0.76417 0.90298 0.90928 0.90640 0.90415 0.77262 0.90619 0.91179 0.91491 0.90860 0.85051 0.85140 0.85257 0.85468 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.83 12.86 -35.23 -0.45 -2.28 16 2 C -0.06 -0.17 2.37 36.00 0.09 -0.09 16 3 Si 0.68 0.36 30.19 -169.99 -5.13 -4.78 16 4 C -0.10 -0.43 5.31 -104.47 -0.55 -0.98 16 5 C 0.15 0.55 6.66 -39.22 -0.26 0.29 16 6 O -0.28 -1.11 9.00 -39.35 -0.35 -1.47 16 7 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 8 C 0.52 0.82 7.87 -10.98 -0.09 0.74 16 9 O -0.51 -3.23 16.16 -14.35 -0.23 -3.47 16 10 N -0.73 1.22 5.08 -53.81 -0.27 0.95 16 11 C 0.15 -0.13 2.45 -67.93 -0.17 -0.30 16 12 H 0.09 0.14 7.58 -51.93 -0.39 -0.26 16 13 C -0.12 0.32 5.39 -26.73 -0.14 0.17 16 14 C -0.11 0.11 5.57 -26.73 -0.15 -0.03 16 15 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 16 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 17 O -0.57 -0.31 13.32 -35.23 -0.47 -0.78 16 18 C -0.15 0.15 5.55 -26.73 -0.15 0.00 16 19 C -0.13 0.11 5.50 -26.73 -0.15 -0.04 16 20 C -0.21 -0.24 9.04 -39.43 -0.36 -0.60 16 21 C -0.07 -0.05 10.04 -39.61 -0.40 -0.45 16 22 C -0.15 -0.25 10.04 -39.56 -0.40 -0.64 16 23 C -0.08 -0.27 8.66 -39.61 -0.34 -0.61 16 24 H 0.38 -0.56 8.74 45.56 0.40 -0.16 16 25 H 0.07 0.20 7.83 -51.93 -0.41 -0.20 16 26 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 27 H -0.25 -0.71 6.76 56.52 0.38 -0.32 16 28 H 0.09 -0.23 7.66 -51.93 -0.40 -0.63 16 29 H 0.09 -0.27 7.66 -51.93 -0.40 -0.67 16 30 H 0.40 -1.97 8.60 -40.82 -0.35 -2.32 16 31 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 34 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.38 -1.24 9.08 45.56 0.41 -0.82 16 36 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 37 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 39 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 40 H 0.13 -0.25 6.30 -52.49 -0.33 -0.58 16 41 H 0.13 -0.24 8.06 -52.48 -0.42 -0.66 16 42 H 0.13 -0.06 8.06 -52.49 -0.42 -0.49 16 43 H 0.13 0.32 4.90 -52.48 -0.26 0.06 16 LS Contribution 351.34 15.07 5.29 5.29 Total: 0.00 -10.84 351.34 -10.18 -21.02 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -5.59 Total: -11.95 kcal Atomic # 6 Polarization: 0.42 SS G_CDS: -2.97 Total: -2.55 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.27 Total: 0.95 kcal Atomic # 8 Polarization: -6.48 SS G_CDS: -1.51 Total: -7.99 kcal Atomic # 14 Polarization: 0.36 SS G_CDS: -5.13 Total: -4.78 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -10.84 -10.18 -21.02 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_2989392.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.968 kcal (2) G-P(sol) polarization free energy of solvation -10.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.807 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.179 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.018 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds