Wall clock time and date at job start Sat Mar 6 2021 15:01:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47247 * 2 1 4 4 C 1.50693 * 109.47071 * 239.99236 * 2 1 3 5 5 C 1.38265 * 119.94769 * 300.00242 * 4 2 1 6 6 C 1.38142 * 120.05487 * 180.02562 * 5 4 2 7 7 C 1.38740 * 119.94647 * 359.97438 * 6 5 4 8 8 O 1.35899 * 120.05399 * 180.02562 * 7 6 5 9 9 C 1.42907 * 116.99595 * 179.97438 * 8 7 6 10 10 C 1.50699 * 109.47064 * 180.02562 * 9 8 7 11 11 O 1.21292 * 119.99825 * 0.02562 * 10 9 8 12 12 N 1.34772 * 120.00302 * 180.02562 * 10 9 8 13 13 C 1.46500 * 120.00198 * 180.02562 * 12 10 9 14 14 H 1.09002 * 109.47092 * 34.99790 * 13 12 10 15 15 C 1.53005 * 109.47094 * 154.99525 * 13 12 10 16 16 C 1.52999 * 109.47159 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47317 * 300.00546 * 16 15 13 18 18 H 1.09002 * 109.47153 * 299.99641 * 17 16 15 19 19 O 1.42896 * 109.46906 * 179.97438 * 17 16 15 20 20 C 1.53000 * 109.47060 * 59.99960 * 17 16 15 21 21 C 1.52997 * 109.47007 * 274.99841 * 13 12 10 22 22 C 1.38732 * 119.88538 * 0.27732 * 7 6 5 23 23 C 1.38144 * 119.94407 * 359.46682 * 22 7 6 24 24 H 0.96705 * 113.99658 * 60.00069 * 1 2 3 25 25 H 1.09000 * 109.46566 * 119.99455 * 2 1 3 26 26 H 1.48501 * 110.00339 * 59.99392 * 3 2 1 27 27 H 1.48495 * 109.99909 * 181.31737 * 3 2 1 28 28 H 1.07991 * 119.97417 * 359.97438 * 5 4 2 29 29 H 1.08003 * 120.02664 * 180.02562 * 6 5 4 30 30 H 1.08999 * 109.46876 * 60.00209 * 9 8 7 31 31 H 1.08999 * 109.47126 * 300.00026 * 9 8 7 32 32 H 0.97002 * 119.99692 * 359.97438 * 12 10 9 33 33 H 1.09002 * 109.46935 * 60.00169 * 15 13 12 34 34 H 1.09000 * 109.47360 * 300.00194 * 15 13 12 35 35 H 1.08996 * 109.46929 * 179.97438 * 16 15 13 36 36 H 1.09002 * 109.46716 * 60.00455 * 16 15 13 37 37 H 0.96703 * 114.00193 * 180.02562 * 19 17 16 38 38 H 1.08992 * 109.47399 * 59.99823 * 20 17 16 39 39 H 1.09004 * 109.46724 * 180.02562 * 20 17 16 40 40 H 1.09002 * 109.46695 * 299.99637 * 21 13 12 41 41 H 1.08993 * 109.47194 * 59.99623 * 21 13 12 42 42 H 1.07994 * 120.02565 * 179.72047 * 22 7 6 43 43 H 1.08004 * 119.97333 * 180.27146 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2303 5 6 1.5966 -2.0343 -1.4479 6 6 2.0562 -2.6880 -2.5747 7 6 2.8540 -2.0149 -3.4888 8 8 3.3070 -2.6557 -4.5983 9 6 4.1230 -1.9003 -5.4959 10 6 4.5275 -2.7691 -6.6589 11 8 4.1534 -3.9215 -6.7140 12 7 5.3050 -2.2655 -7.6379 13 6 5.6978 -3.1099 -8.7688 14 1 4.8834 -3.7922 -9.0129 15 6 6.0051 -2.2283 -9.9810 16 6 6.4159 -3.1101 -11.1619 17 6 7.6618 -3.9155 -10.7879 18 1 8.4759 -3.2330 -10.5437 19 8 8.0451 -4.7395 -11.8907 20 6 7.3544 -4.7971 -9.5758 21 6 6.9435 -3.9157 -8.3951 22 6 3.1927 -0.6883 -3.2655 23 6 2.7261 -0.0375 -2.1398 24 1 -0.3933 0.4417 -0.7651 25 1 1.7922 -0.5138 0.8901 26 1 1.5614 2.4680 1.2084 27 1 3.5346 1.7702 -0.0321 28 1 0.9759 -2.5579 -0.7359 29 1 1.7941 -3.7219 -2.7444 30 1 5.0146 -1.5546 -4.9728 31 1 3.5609 -1.0415 -5.8626 32 1 5.6039 -1.3438 -7.5940 33 1 6.8195 -1.5461 -9.7369 34 1 5.1176 -1.6542 -10.2472 35 1 6.6345 -2.4821 -12.0255 36 1 5.6019 -3.7926 -11.4061 37 1 8.8296 -5.2798 -11.7240 38 1 6.5404 -5.4795 -9.8200 39 1 8.2422 -5.3706 -9.3091 40 1 7.7578 -3.2334 -8.1511 41 1 6.7245 -4.5437 -7.5316 42 1 3.8173 -0.1635 -3.9732 43 1 2.9859 0.9966 -1.9677 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:32 Heat of formation + Delta-G solvation = -131.200733 kcal Electronic energy + Delta-G solvation = -24704.308509 eV Core-core repulsion = 20909.062404 eV Total energy + Delta-G solvation = -3795.246105 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.64327 -40.94972 -39.74194 -38.91436 -37.21173 -36.93613 -34.60679 -32.45470 -32.01093 -31.77663 -30.55397 -28.56558 -26.22974 -24.21318 -24.00384 -23.28747 -22.32827 -21.65258 -21.06128 -19.54499 -18.59375 -18.28397 -18.12763 -17.51118 -17.33623 -16.91656 -16.52472 -16.12910 -16.00135 -15.64242 -15.63229 -15.46924 -14.98045 -14.76796 -14.70937 -14.30779 -14.26466 -13.77820 -13.59661 -13.49366 -13.45682 -13.36847 -13.09868 -12.54953 -12.30483 -12.24267 -12.14014 -12.07192 -11.87192 -11.75313 -11.41032 -10.97002 -10.82872 -10.44175 -10.22802 -10.07480 -9.23880 -5.07884 0.26260 0.27240 1.27464 1.37853 1.43648 1.58733 1.94357 2.47715 2.63675 3.10377 3.37937 3.45769 3.49717 3.56933 3.65393 3.70122 3.83290 3.83901 3.85186 3.88942 4.00733 4.06940 4.15573 4.23776 4.27262 4.30631 4.41671 4.48690 4.51748 4.61770 4.71162 4.83270 4.89400 4.92337 4.96800 5.01078 5.11695 5.12865 5.19812 5.22067 5.32927 5.47972 5.65423 6.18318 6.32766 6.57025 6.63223 7.04004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.687 3.313 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.516 3.484 11 O -0.510 6.510 12 N -0.725 5.725 13 C 0.145 3.855 14 H 0.093 0.907 15 C -0.123 4.123 16 C -0.110 4.110 17 C 0.103 3.897 18 H 0.056 0.944 19 O -0.568 6.568 20 C -0.150 4.150 21 C -0.128 4.128 22 C -0.206 4.206 23 C -0.076 4.076 24 H 0.379 0.621 25 H 0.113 0.887 26 H -0.255 1.255 27 H -0.259 1.259 28 H 0.135 0.865 29 H 0.136 0.864 30 H 0.095 0.905 31 H 0.096 0.904 32 H 0.402 0.598 33 H 0.072 0.928 34 H 0.079 0.921 35 H 0.077 0.923 36 H 0.075 0.925 37 H 0.380 0.620 38 H 0.075 0.925 39 H 0.070 0.930 40 H 0.067 0.933 41 H 0.073 0.927 42 H 0.132 0.868 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.860 5.623 -2.367 6.738 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.175 4.175 3 Si 0.589 3.411 4 C -0.158 4.158 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.301 3.699 11 O -0.384 6.384 12 N -0.378 5.378 13 C 0.041 3.959 14 H 0.111 0.889 15 C -0.161 4.161 16 C -0.148 4.148 17 C 0.044 3.956 18 H 0.074 0.926 19 O -0.374 6.374 20 C -0.189 4.189 21 C -0.167 4.167 22 C -0.225 4.225 23 C -0.094 4.094 24 H 0.226 0.774 25 H 0.130 0.870 26 H -0.180 1.180 27 H -0.184 1.184 28 H 0.153 0.847 29 H 0.154 0.846 30 H 0.112 0.888 31 H 0.114 0.886 32 H 0.236 0.764 33 H 0.091 0.909 34 H 0.097 0.903 35 H 0.096 0.904 36 H 0.093 0.907 37 H 0.227 0.773 38 H 0.094 0.906 39 H 0.088 0.912 40 H 0.085 0.915 41 H 0.091 0.909 42 H 0.149 0.851 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.585 5.138 -1.748 6.012 hybrid contribution 0.961 -0.204 0.472 1.090 sum 3.546 4.934 -1.276 6.209 Atomic orbital electron populations 1.86504 1.17171 1.81691 1.49263 1.24978 0.85196 1.09872 0.97409 0.94809 0.80793 0.78192 0.87262 1.20257 1.01844 0.95607 0.98068 1.20857 0.96778 0.93415 0.95844 1.20544 1.00403 1.01275 0.94173 1.19078 0.94287 0.91088 0.86714 1.86177 1.64293 1.38603 1.30971 1.22479 0.96409 0.94572 0.90439 1.20046 0.78617 0.88126 0.83152 1.90796 1.53240 1.17565 1.76790 1.45884 1.52721 1.16016 1.23196 1.21084 0.97670 0.92537 0.84641 0.88867 1.21768 1.02458 0.98022 0.93873 1.21405 0.97207 0.98436 0.97796 1.21846 0.96595 0.91464 0.85688 0.92595 1.86520 1.50864 1.60241 1.39736 1.22234 1.02679 0.98828 0.95115 1.21864 0.97297 0.98860 0.98647 1.21167 1.06173 0.94254 1.00910 1.20789 0.96254 0.99044 0.93279 0.77376 0.86973 1.17996 1.18404 0.84736 0.84633 0.88759 0.88627 0.76356 0.90907 0.90273 0.90396 0.90650 0.77251 0.90624 0.91170 0.91458 0.90857 0.85064 0.85316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.10 12.77 -35.23 -0.45 -0.55 16 2 C -0.06 0.02 2.82 36.00 0.10 0.12 16 3 Si 0.69 -0.93 29.78 -169.99 -5.06 -5.99 16 4 C -0.16 -0.01 5.39 -104.60 -0.56 -0.58 16 5 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 6 C -0.15 -0.23 9.99 -39.43 -0.39 -0.63 16 7 C 0.13 0.19 6.69 -39.21 -0.26 -0.07 16 8 O -0.29 -0.72 9.67 -39.33 -0.38 -1.10 16 9 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 10 C 0.52 0.43 7.87 -10.99 -0.09 0.35 16 11 O -0.51 -3.03 16.16 -14.36 -0.23 -3.26 16 12 N -0.72 1.68 5.08 -53.80 -0.27 1.41 16 13 C 0.14 -0.19 2.45 -67.93 -0.17 -0.36 16 14 H 0.09 0.10 7.58 -51.93 -0.39 -0.30 16 15 C -0.12 0.37 5.39 -26.73 -0.14 0.23 16 16 C -0.11 0.15 5.57 -26.73 -0.15 0.00 16 17 C 0.10 -0.11 3.47 -26.73 -0.09 -0.20 16 18 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 19 O -0.57 -0.23 13.32 -35.23 -0.47 -0.70 16 20 C -0.15 0.17 5.54 -26.75 -0.15 0.02 16 21 C -0.13 0.14 5.49 -26.75 -0.15 -0.01 16 22 C -0.21 0.14 9.04 -39.43 -0.36 -0.22 16 23 C -0.08 0.06 8.66 -39.60 -0.34 -0.28 16 24 H 0.38 -1.38 8.70 45.56 0.40 -0.99 16 25 H 0.11 0.02 7.96 -51.93 -0.41 -0.40 16 26 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 27 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 28 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 29 H 0.14 0.16 8.06 -52.48 -0.42 -0.26 16 30 H 0.09 -0.37 7.65 -51.93 -0.40 -0.77 16 31 H 0.10 -0.40 7.67 -51.93 -0.40 -0.79 16 32 H 0.40 -2.27 8.60 -40.82 -0.35 -2.62 16 33 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 34 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 35 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 36 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 37 H 0.38 -1.27 9.08 45.56 0.41 -0.86 16 38 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 42 H 0.13 -0.46 6.30 -52.49 -0.33 -0.79 16 43 H 0.13 -0.37 4.87 -52.48 -0.26 -0.62 16 LS Contribution 352.01 15.07 5.30 5.30 Total: 0.00 -10.23 352.01 -10.09 -20.32 By element: Atomic # 1 Polarization: -7.93 SS G_CDS: -5.58 Total: -13.51 kcal Atomic # 6 Polarization: 1.02 SS G_CDS: -2.94 Total: -1.93 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: -0.27 Total: 1.41 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -1.53 Total: -5.61 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.06 Total: -5.99 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -10.23 -10.09 -20.32 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.882 kcal (2) G-P(sol) polarization free energy of solvation -10.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.115 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.319 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds