Wall clock time and date at job start Sat Mar 6 2021 15:01:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47509 * 2 1 4 4 C 1.50702 * 109.47007 * 239.99614 * 2 1 3 5 5 C 1.38273 * 119.94059 * 119.73091 * 4 2 1 6 6 C 1.38148 * 120.05257 * 179.72295 * 5 4 2 7 7 C 1.38728 * 119.94510 * 0.54976 * 6 5 4 8 8 O 1.35895 * 120.05685 * 179.74584 * 7 6 5 9 9 C 1.42904 * 116.99898 * 359.97438 * 8 7 6 10 10 C 1.52998 * 109.47038 * 180.02562 * 9 8 7 11 11 C 1.50703 * 109.47232 * 179.97438 * 10 9 8 12 12 O 1.21282 * 119.99741 * 0.02562 * 11 10 9 13 13 N 1.34768 * 120.00041 * 179.97438 * 11 10 9 14 14 C 1.46507 * 120.00126 * 180.02562 * 13 11 10 15 15 H 1.09003 * 109.46701 * 325.00270 * 14 13 11 16 16 C 1.53001 * 109.46954 * 84.99824 * 14 13 11 17 17 C 1.53003 * 109.46662 * 180.02562 * 16 14 13 18 18 C 1.53004 * 109.46930 * 299.99649 * 17 16 14 19 19 H 1.09003 * 109.47574 * 300.00441 * 18 17 16 20 20 O 1.42904 * 109.47063 * 180.02562 * 18 17 16 21 21 C 1.53002 * 109.46809 * 60.00545 * 18 17 16 22 22 C 1.52995 * 109.47373 * 205.00468 * 14 13 11 23 23 C 1.38729 * 119.88775 * 359.72544 * 7 6 5 24 24 C 1.38143 * 119.94836 * 359.97438 * 23 7 6 25 25 H 0.96700 * 113.99509 * 59.99951 * 1 2 3 26 26 H 1.09004 * 109.46926 * 120.00048 * 2 1 3 27 27 H 1.48498 * 109.99634 * 298.68172 * 3 2 1 28 28 H 1.48502 * 109.99691 * 59.99915 * 3 2 1 29 29 H 1.07998 * 119.96907 * 359.97438 * 5 4 2 30 30 H 1.07995 * 120.02290 * 180.27084 * 6 5 4 31 31 H 1.09000 * 109.46832 * 299.99752 * 9 8 7 32 32 H 1.08999 * 109.47101 * 60.00169 * 9 8 7 33 33 H 1.09005 * 109.47133 * 299.99932 * 10 9 8 34 34 H 1.08999 * 109.47163 * 60.00052 * 10 9 8 35 35 H 0.97003 * 120.00160 * 0.02562 * 13 11 10 36 36 H 1.08996 * 109.47476 * 300.00298 * 16 14 13 37 37 H 1.09003 * 109.47053 * 60.00661 * 16 14 13 38 38 H 1.08999 * 109.46684 * 180.02562 * 17 16 14 39 39 H 1.08992 * 109.47582 * 59.99772 * 17 16 14 40 40 H 0.96694 * 113.99869 * 60.00379 * 20 18 17 41 41 H 1.09004 * 109.46868 * 179.97438 * 21 18 17 42 42 H 1.09000 * 109.47088 * 60.00162 * 21 18 17 43 43 H 1.09003 * 109.47045 * 299.99591 * 22 14 13 44 44 H 1.08992 * 109.47148 * 59.99402 * 22 14 13 45 45 H 1.08003 * 120.03099 * 180.02562 * 23 7 6 46 46 H 1.07996 * 119.97787 * 180.02562 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7216 -0.0358 -2.1427 6 6 3.1881 -0.6865 -3.2685 7 6 2.8536 -2.0146 -3.4892 8 8 3.3069 -2.6554 -4.5985 9 6 4.1234 -1.9002 -5.4958 10 6 4.5344 -2.7823 -6.6765 11 6 5.3949 -1.9857 -7.6231 12 8 5.6543 -0.8267 -7.3773 13 7 5.8770 -2.5615 -8.7421 14 6 6.7140 -1.7872 -9.6621 15 1 6.3702 -0.7531 -9.6831 16 6 8.1682 -1.8317 -9.1886 17 6 9.0422 -1.0226 -10.1491 18 6 8.9447 -1.6208 -11.5540 19 1 9.2886 -2.6549 -11.5334 20 8 9.7615 -0.8654 -12.4510 21 6 7.4905 -1.5763 -12.0274 22 6 6.6164 -2.3857 -11.0668 23 6 2.0559 -2.6877 -2.5753 24 6 1.5970 -2.0344 -1.4479 25 1 -0.3932 0.4417 -0.7651 26 1 1.7923 -0.5139 0.8900 27 1 1.5880 2.4585 -1.2242 28 1 1.5616 2.4678 1.2085 29 1 2.9777 0.9995 -1.9728 30 1 3.8089 -0.1603 -3.9785 31 1 3.5615 -1.0413 -5.8628 32 1 5.0148 -1.5545 -4.9724 33 1 5.0962 -3.6415 -6.3098 34 1 3.6428 -3.1276 -7.1997 35 1 5.6699 -3.4886 -8.9385 36 1 8.2378 -1.4054 -8.1880 37 1 8.5120 -2.8659 -9.1677 38 1 10.0783 -1.0547 -9.8121 39 1 8.6983 0.0114 -10.1698 40 1 10.6982 -0.8502 -12.2118 41 1 7.4211 -2.0020 -13.0285 42 1 7.1466 -0.5421 -12.0482 43 1 6.9602 -3.4199 -11.0459 44 1 5.5804 -2.3540 -11.4040 45 1 1.7944 -3.7218 -2.7446 46 1 0.9763 -2.5580 -0.7359 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:35 Heat of formation + Delta-G solvation = -141.406724 kcal Electronic energy + Delta-G solvation = -26331.946021 eV Core-core repulsion = 22380.719732 eV Total energy + Delta-G solvation = -3951.226289 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.47240 -41.06501 -39.74710 -39.11151 -37.27600 -37.03852 -34.59242 -33.36710 -32.03188 -31.99719 -31.43751 -29.47548 -26.56809 -25.57938 -24.00868 -23.75742 -22.92038 -22.14058 -21.56559 -20.96253 -19.49894 -18.40931 -18.29611 -17.85489 -17.58889 -17.49664 -16.93120 -16.38635 -16.27599 -16.10437 -15.90703 -15.62439 -15.55416 -14.97132 -14.81029 -14.69037 -14.46744 -14.27292 -14.21097 -13.96598 -13.45935 -13.40973 -13.36963 -13.13452 -12.94797 -12.83321 -12.52309 -12.30340 -12.16843 -12.04044 -11.87050 -11.80526 -11.54675 -11.41116 -11.03840 -10.84503 -10.55597 -10.20067 -9.99282 -9.16541 -4.93207 0.33230 0.35576 1.32671 1.48214 1.62518 1.64218 1.99193 2.40337 2.70272 3.11221 3.41100 3.43469 3.50282 3.57249 3.71678 3.78853 3.81915 3.84458 3.89683 3.97445 4.01773 4.07162 4.15784 4.23927 4.27808 4.30078 4.32629 4.39536 4.52192 4.55531 4.57514 4.61857 4.71539 4.76152 4.83992 4.89759 4.96508 4.99558 5.00276 5.12197 5.20930 5.22004 5.32904 5.35371 5.53208 5.74867 6.29497 6.37641 6.44143 6.62771 7.05297 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.681 3.319 4 C -0.157 4.157 5 C -0.075 4.075 6 C -0.203 4.203 7 C 0.138 3.862 8 O -0.316 6.316 9 C 0.074 3.926 10 C -0.142 4.142 11 C 0.521 3.479 12 O -0.537 6.537 13 N -0.726 5.726 14 C 0.142 3.858 15 H 0.092 0.908 16 C -0.127 4.127 17 C -0.150 4.150 18 C 0.103 3.897 19 H 0.056 0.944 20 O -0.568 6.568 21 C -0.110 4.110 22 C -0.124 4.124 23 C -0.151 4.151 24 C -0.053 4.053 25 H 0.376 0.624 26 H 0.118 0.882 27 H -0.261 1.261 28 H -0.257 1.257 29 H 0.129 0.871 30 H 0.134 0.866 31 H 0.073 0.927 32 H 0.074 0.926 33 H 0.107 0.893 34 H 0.107 0.893 35 H 0.403 0.597 36 H 0.072 0.928 37 H 0.066 0.934 38 H 0.069 0.931 39 H 0.075 0.925 40 H 0.380 0.620 41 H 0.077 0.923 42 H 0.074 0.926 43 H 0.072 0.928 44 H 0.078 0.922 45 H 0.133 0.867 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.062 -3.739 -2.118 5.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.582 3.418 4 C -0.157 4.157 5 C -0.093 4.093 6 C -0.221 4.221 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.307 3.693 12 O -0.413 6.413 13 N -0.377 5.377 14 C 0.038 3.962 15 H 0.110 0.890 16 C -0.166 4.166 17 C -0.188 4.188 18 C 0.044 3.956 19 H 0.074 0.926 20 O -0.374 6.374 21 C -0.148 4.148 22 C -0.162 4.162 23 C -0.169 4.169 24 C -0.071 4.071 25 H 0.223 0.777 26 H 0.135 0.865 27 H -0.186 1.186 28 H -0.182 1.182 29 H 0.147 0.853 30 H 0.152 0.848 31 H 0.091 0.909 32 H 0.092 0.908 33 H 0.126 0.874 34 H 0.125 0.875 35 H 0.237 0.763 36 H 0.091 0.909 37 H 0.085 0.915 38 H 0.088 0.912 39 H 0.093 0.907 40 H 0.227 0.773 41 H 0.096 0.904 42 H 0.093 0.907 43 H 0.091 0.909 44 H 0.096 0.904 45 H 0.151 0.849 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.515 -2.470 -1.754 3.937 hybrid contribution -0.464 -0.606 -0.408 0.866 sum 2.051 -3.076 -2.162 4.283 Atomic orbital electron populations 1.86591 1.17871 1.79937 1.49344 1.24936 0.83819 1.10711 0.98420 0.95062 0.91804 0.74725 0.80203 1.20185 1.02044 0.95514 0.97997 1.20810 0.96071 0.99224 0.93174 1.21266 1.05805 0.94358 1.00708 1.18991 0.94039 0.91013 0.86733 1.85975 1.65062 1.40444 1.31519 1.22427 0.94736 0.93831 0.89181 1.21477 1.01374 0.99914 0.95419 1.20300 0.79831 0.87447 0.81700 1.90756 1.59066 1.17215 1.74278 1.46030 1.52519 1.15992 1.23165 1.21075 0.90137 0.97010 0.87984 0.88995 1.21863 0.94106 1.00801 0.99800 1.22239 1.00473 1.00960 0.95160 1.21850 0.91579 0.94042 0.88136 0.92599 1.86519 1.22756 1.75134 1.52967 1.21412 0.92529 1.01661 0.99230 1.21772 1.01005 1.00031 0.93369 1.20503 1.00913 1.01072 0.94450 1.20831 0.96928 0.93451 0.95929 0.77682 0.86467 1.18576 1.18241 0.85348 0.84802 0.90920 0.90799 0.87426 0.87467 0.76261 0.90909 0.91487 0.91200 0.90678 0.77261 0.90443 0.90704 0.90930 0.90354 0.84872 0.84889 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.90 12.77 -35.23 -0.45 -1.35 16 2 C -0.07 -0.02 2.82 36.01 0.10 0.08 16 3 Si 0.68 -0.21 29.78 -169.99 -5.06 -5.28 16 4 C -0.16 -0.13 5.39 -104.60 -0.56 -0.69 16 5 C -0.08 -0.05 8.66 -39.60 -0.34 -0.39 16 6 C -0.20 -0.23 9.04 -39.43 -0.36 -0.59 16 7 C 0.14 0.25 6.69 -39.22 -0.26 -0.02 16 8 O -0.32 -0.43 10.14 -19.41 -0.20 -0.63 16 9 C 0.07 -0.01 4.03 37.16 0.15 0.14 16 10 C -0.14 0.32 6.07 -27.88 -0.17 0.15 16 11 C 0.52 -0.12 7.79 -10.99 -0.09 -0.21 16 12 O -0.54 -2.01 15.65 5.56 0.09 -1.93 16 13 N -0.73 1.73 5.08 -53.80 -0.27 1.46 16 14 C 0.14 -0.21 2.45 -67.93 -0.17 -0.37 16 15 H 0.09 0.07 7.58 -51.93 -0.39 -0.32 16 16 C -0.13 0.17 5.49 -26.73 -0.15 0.02 16 17 C -0.15 0.20 5.55 -26.73 -0.15 0.05 16 18 C 0.10 -0.11 3.47 -26.73 -0.09 -0.21 16 19 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 20 O -0.57 -0.21 13.32 -35.23 -0.47 -0.68 16 21 C -0.11 0.14 5.58 -26.71 -0.15 -0.01 16 22 C -0.12 0.35 5.39 -26.72 -0.14 0.21 16 23 C -0.15 -0.20 9.99 -39.43 -0.39 -0.59 16 24 C -0.05 -0.05 9.61 -39.61 -0.38 -0.43 16 25 H 0.38 -0.37 8.70 45.56 0.40 0.02 16 26 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 27 H -0.26 -0.45 7.10 56.52 0.40 -0.05 16 28 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 29 H 0.13 -0.14 4.87 -52.49 -0.26 -0.39 16 30 H 0.13 0.01 6.30 -52.49 -0.33 -0.32 16 31 H 0.07 0.03 7.62 -51.93 -0.40 -0.37 16 32 H 0.07 0.01 7.62 -51.93 -0.40 -0.39 16 33 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 34 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 35 H 0.40 -2.05 8.60 -40.82 -0.35 -2.40 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 40 H 0.38 -1.30 9.08 45.56 0.41 -0.88 16 41 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 42 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 43 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 44 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 45 H 0.13 0.02 8.06 -52.48 -0.42 -0.41 16 46 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 LS Contribution 372.97 15.07 5.62 5.62 Total: 0.00 -8.49 372.97 -10.31 -18.80 By element: Atomic # 1 Polarization: -6.75 SS G_CDS: -6.42 Total: -13.17 kcal Atomic # 6 Polarization: 0.30 SS G_CDS: -3.15 Total: -2.86 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -0.27 Total: 1.46 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -1.03 Total: -4.58 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.06 Total: -5.28 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -8.49 -10.31 -18.80 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.606 kcal (2) G-P(sol) polarization free energy of solvation -8.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.092 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.800 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds