Wall clock time and date at job start Sat Mar 6 2021 15:01:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.46919 * 2 1 4 4 C 1.50703 * 109.47161 * 240.00016 * 2 1 3 5 5 C 1.38243 * 119.97305 * 119.97235 * 4 2 1 6 6 C 1.38289 * 120.11362 * 180.02562 * 5 4 2 7 7 C 1.38125 * 120.05159 * 0.02562 * 6 5 4 8 8 C 1.38747 * 119.94590 * 359.97438 * 7 6 5 9 9 O 1.35899 * 120.05586 * 180.02562 * 8 7 6 10 10 C 1.42903 * 116.99930 * 359.97438 * 9 8 7 11 11 C 1.53002 * 109.47006 * 180.02562 * 10 9 8 12 12 C 1.50704 * 109.46600 * 180.02562 * 11 10 9 13 13 O 1.21278 * 120.00404 * 359.97438 * 12 11 10 14 14 N 1.34783 * 119.99397 * 180.02562 * 12 11 10 15 15 C 1.46500 * 119.99694 * 179.97438 * 14 12 11 16 16 H 1.08999 * 109.47113 * 325.00052 * 15 14 12 17 17 C 1.53005 * 109.47118 * 85.00104 * 15 14 12 18 18 C 1.52995 * 109.46992 * 179.97438 * 17 15 14 19 19 C 1.52997 * 109.47499 * 299.99806 * 18 17 15 20 20 H 1.09006 * 109.47041 * 300.00645 * 19 18 17 21 21 O 1.42894 * 109.47501 * 180.02562 * 19 18 17 22 22 C 1.52996 * 109.46808 * 59.99966 * 19 18 17 23 23 C 1.52995 * 109.47491 * 300.00306 * 22 19 18 24 24 C 1.38163 * 119.97257 * 300.00288 * 4 2 1 25 25 H 0.96698 * 113.99581 * 300.00349 * 1 2 3 26 26 H 1.08999 * 109.47278 * 120.00299 * 2 1 3 27 27 H 1.48499 * 110.00425 * 299.99614 * 3 2 1 28 28 H 1.48497 * 110.00228 * 61.32043 * 3 2 1 29 29 H 1.08004 * 119.94070 * 0.05018 * 5 4 2 30 30 H 1.07993 * 119.96940 * 180.28495 * 6 5 4 31 31 H 1.08000 * 120.02364 * 180.02562 * 7 6 5 32 32 H 1.08998 * 109.47294 * 300.00489 * 10 9 8 33 33 H 1.08995 * 109.47056 * 60.00501 * 10 9 8 34 34 H 1.08993 * 109.47487 * 299.99875 * 11 10 9 35 35 H 1.09003 * 109.46669 * 60.00618 * 11 10 9 36 36 H 0.96991 * 120.00114 * 0.02562 * 14 12 11 37 37 H 1.09007 * 109.46628 * 299.99811 * 17 15 14 38 38 H 1.08994 * 109.47225 * 59.99513 * 17 15 14 39 39 H 1.09002 * 109.46956 * 179.97438 * 18 17 15 40 40 H 1.08999 * 109.47129 * 60.00016 * 18 17 15 41 41 H 0.96696 * 114.00231 * 59.99664 * 21 19 18 42 42 H 1.09001 * 109.47259 * 180.02562 * 22 19 18 43 43 H 1.08999 * 109.47076 * 60.00245 * 22 19 18 44 44 H 1.09006 * 109.47283 * 299.99887 * 23 22 19 45 45 H 1.09003 * 109.47575 * 180.02562 * 23 22 19 46 46 H 1.08001 * 120.02724 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7257 -0.0379 -2.1404 6 6 3.1878 -0.6868 -3.2707 7 6 2.8561 -2.0090 -3.4935 8 6 2.0591 -2.6862 -2.5818 9 8 1.7319 -3.9873 -2.7985 10 6 2.2428 -4.5956 -3.9864 11 6 1.7720 -6.0496 -4.0578 12 6 2.3114 -6.6912 -5.3103 13 8 3.0038 -6.0487 -6.0710 14 7 2.0235 -7.9788 -5.5854 15 6 2.5474 -8.6024 -6.8031 16 1 2.5774 -7.8648 -7.6051 17 6 3.9602 -9.1275 -6.5400 18 6 4.5070 -9.7793 -7.8116 19 6 3.5991 -10.9410 -8.2203 20 1 3.5691 -11.6784 -7.4179 21 8 4.1102 -11.5502 -9.4075 22 6 2.1864 -10.4160 -8.4833 23 6 1.6395 -9.7641 -7.2118 24 6 1.5972 -2.0332 -1.4486 25 1 -0.3932 0.4418 0.7650 26 1 1.7924 -0.5139 0.8899 27 1 1.5615 2.4679 -1.2085 28 1 1.5879 2.4585 1.2242 29 1 2.9860 0.9960 -1.9679 30 1 3.8119 -0.1605 -3.9777 31 1 3.2176 -2.5154 -4.3762 32 1 1.8782 -4.0527 -4.8584 33 1 3.3323 -4.5665 -3.9697 34 1 2.1363 -6.5928 -3.1859 35 1 0.6825 -6.0782 -4.0748 36 1 1.4689 -8.4923 -4.9776 37 1 4.6069 -8.2999 -6.2485 38 1 3.9302 -9.8651 -5.7381 39 1 5.5137 -10.1530 -7.6243 40 1 4.5370 -9.0420 -8.6138 41 1 5.0043 -11.9063 -9.3134 42 1 1.5394 -11.2436 -8.7741 43 1 2.2163 -9.6787 -9.2856 44 1 1.6095 -10.5015 -6.4095 45 1 0.6328 -9.3905 -7.3991 46 1 0.9766 -2.5581 -0.7375 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:37 Heat of formation + Delta-G solvation = -142.146965 kcal Electronic energy + Delta-G solvation = -26329.367832 eV Core-core repulsion = 22378.109443 eV Total energy + Delta-G solvation = -3951.258389 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.48052 -41.06338 -39.70135 -39.04432 -37.47085 -37.03314 -34.57597 -33.27256 -32.61358 -31.90045 -30.94684 -29.35189 -27.03087 -25.41810 -23.90051 -23.67577 -23.10390 -21.89984 -21.49722 -20.87659 -19.18581 -18.57472 -18.24943 -17.91395 -17.63214 -17.49629 -17.22169 -16.90840 -16.27496 -15.96401 -15.78991 -15.62950 -15.52160 -14.92917 -14.77451 -14.56928 -14.49296 -14.21071 -14.03685 -13.91230 -13.48680 -13.37696 -13.27948 -13.06081 -12.97438 -12.88267 -12.46275 -12.36183 -12.20498 -12.03179 -11.83067 -11.77248 -11.69559 -11.31591 -11.07847 -10.79009 -10.57729 -10.14871 -9.91326 -9.28907 -4.91560 0.17979 0.37535 1.28011 1.49960 1.60715 1.68345 1.95587 2.44697 2.61279 3.26059 3.35579 3.52944 3.58260 3.68224 3.74661 3.83133 3.87400 3.95301 4.00561 4.08783 4.10576 4.18797 4.22202 4.24464 4.27731 4.33121 4.39998 4.41086 4.47662 4.60402 4.64096 4.66018 4.75263 4.86206 4.93855 4.96360 4.99531 5.07128 5.09444 5.21812 5.23222 5.30014 5.36111 5.43735 5.44821 5.67582 6.30782 6.45237 6.57855 6.84827 7.14531 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.090 4.090 3 Si 0.771 3.229 4 C -0.048 4.048 5 C -0.159 4.159 6 C -0.075 4.075 7 C -0.212 4.212 8 C 0.116 3.884 9 O -0.323 6.323 10 C 0.074 3.926 11 C -0.132 4.132 12 C 0.520 3.480 13 O -0.583 6.583 14 N -0.711 5.711 15 C 0.143 3.857 16 H 0.064 0.936 17 C -0.121 4.121 18 C -0.146 4.146 19 C 0.103 3.897 20 H 0.072 0.928 21 O -0.590 6.590 22 C -0.113 4.113 23 C -0.113 4.113 24 C -0.141 4.141 25 H 0.396 0.604 26 H 0.098 0.902 27 H -0.299 1.299 28 H -0.283 1.283 29 H 0.147 0.853 30 H 0.155 0.845 31 H 0.138 0.862 32 H 0.062 0.938 33 H 0.067 0.933 34 H 0.128 0.872 35 H 0.125 0.875 36 H 0.420 0.580 37 H 0.051 0.949 38 H 0.084 0.916 39 H 0.078 0.922 40 H 0.055 0.945 41 H 0.394 0.606 42 H 0.078 0.922 43 H 0.057 0.943 44 H 0.093 0.907 45 H 0.084 0.916 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.520 -3.638 4.200 5.761 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.198 4.198 3 Si 0.676 3.324 4 C -0.048 4.048 5 C -0.177 4.177 6 C -0.093 4.093 7 C -0.231 4.231 8 C 0.071 3.929 9 O -0.238 6.238 10 C -0.002 4.002 11 C -0.172 4.172 12 C 0.307 3.693 13 O -0.463 6.463 14 N -0.363 5.363 15 C 0.038 3.962 16 H 0.082 0.918 17 C -0.160 4.160 18 C -0.184 4.184 19 C 0.044 3.956 20 H 0.089 0.911 21 O -0.399 6.399 22 C -0.151 4.151 23 C -0.151 4.151 24 C -0.160 4.160 25 H 0.246 0.754 26 H 0.115 0.885 27 H -0.227 1.227 28 H -0.210 1.210 29 H 0.164 0.836 30 H 0.172 0.828 31 H 0.156 0.844 32 H 0.080 0.920 33 H 0.085 0.915 34 H 0.146 0.854 35 H 0.143 0.857 36 H 0.257 0.743 37 H 0.070 0.930 38 H 0.102 0.898 39 H 0.097 0.903 40 H 0.074 0.926 41 H 0.244 0.756 42 H 0.097 0.903 43 H 0.076 0.924 44 H 0.112 0.888 45 H 0.102 0.898 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.182 -2.652 3.009 4.181 hybrid contribution -0.688 -0.380 0.533 0.950 sum 0.494 -3.032 3.542 4.688 Atomic orbital electron populations 1.86550 1.18442 1.80798 1.51085 1.25108 0.84179 1.12239 0.98243 0.94005 0.90350 0.71574 0.76450 1.19310 0.96765 0.92949 0.95764 1.21131 1.00849 1.00636 0.95043 1.21233 0.97716 0.93459 0.96884 1.21547 1.03240 0.97068 1.01197 1.19120 0.95265 0.83578 0.94912 1.85946 1.71482 1.22689 1.43633 1.22445 0.99044 0.93262 0.85434 1.21440 1.04881 0.93886 0.96975 1.20637 0.79467 0.82140 0.87029 1.90739 1.40219 1.63879 1.51490 1.45904 1.53359 1.11590 1.25445 1.20996 0.93583 0.94830 0.86773 0.91817 1.21799 0.95687 1.00323 0.98204 1.22187 1.00088 0.98500 0.97638 1.21909 0.93406 0.93284 0.86957 0.91055 1.86481 1.37350 1.78689 1.37335 1.21436 0.95031 1.00723 0.97933 1.21694 0.98898 0.96504 0.98001 1.20318 1.03478 0.94736 0.97481 0.75365 0.88453 1.22709 1.21046 0.83632 0.82767 0.84433 0.91969 0.91480 0.85361 0.85661 0.74283 0.93014 0.89781 0.90297 0.92626 0.75631 0.90344 0.92400 0.88830 0.89783 0.85307 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.11 12.74 -148.98 -1.90 -4.00 16 2 C -0.09 -0.09 2.81 71.24 0.20 0.11 16 3 Si 0.77 -1.03 29.79 68.60 2.04 1.01 16 4 C -0.05 -0.23 5.42 -19.88 -0.11 -0.34 16 5 C -0.16 -0.43 8.67 22.28 0.19 -0.24 16 6 C -0.08 -0.18 10.04 22.25 0.22 0.04 16 7 C -0.21 -1.05 9.04 22.36 0.20 -0.85 16 8 C 0.12 0.84 6.69 22.50 0.15 0.99 16 9 O -0.32 -1.88 10.14 -92.41 -0.94 -2.81 16 10 C 0.07 0.17 4.03 71.98 0.29 0.46 16 11 C -0.13 0.46 6.07 29.85 0.18 0.64 16 12 C 0.52 0.56 7.79 87.66 0.68 1.24 16 13 O -0.58 -6.07 15.64 -3.02 -0.05 -6.11 16 14 N -0.71 3.06 5.08 -442.52 -2.25 0.81 16 15 C 0.14 -0.26 2.46 44.99 0.11 -0.15 16 16 H 0.06 0.28 7.58 -2.39 -0.02 0.26 16 17 C -0.12 0.21 5.49 30.59 0.17 0.38 16 18 C -0.15 0.22 5.54 30.59 0.17 0.39 16 19 C 0.10 -0.20 3.47 30.59 0.11 -0.09 16 20 H 0.07 -0.34 8.14 -2.38 -0.02 -0.36 16 21 O -0.59 -0.78 13.32 -148.98 -1.98 -2.76 16 22 C -0.11 0.21 5.57 30.59 0.17 0.38 16 23 C -0.11 0.65 5.39 30.59 0.16 0.82 16 24 C -0.14 -1.02 9.55 22.36 0.21 -0.80 16 25 H 0.40 -1.89 8.74 -74.06 -0.65 -2.54 16 26 H 0.10 -0.30 7.96 -2.39 -0.02 -0.32 16 27 H -0.30 -1.83 7.11 99.48 0.71 -1.12 16 28 H -0.28 -0.64 7.11 99.48 0.71 0.07 16 29 H 0.15 -0.26 4.87 -2.91 -0.01 -0.27 16 30 H 0.15 -0.45 8.06 -2.91 -0.02 -0.47 16 31 H 0.14 0.43 6.30 -2.91 -0.02 0.41 16 32 H 0.06 0.26 7.62 -2.39 -0.02 0.24 16 33 H 0.07 0.22 7.62 -2.39 -0.02 0.20 16 34 H 0.13 -0.96 8.14 -2.39 -0.02 -0.98 16 35 H 0.13 -0.86 8.14 -2.39 -0.02 -0.88 16 36 H 0.42 -4.60 8.60 -92.72 -0.80 -5.40 16 37 H 0.05 0.15 8.14 -2.38 -0.02 0.13 16 38 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 39 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 40 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 41 H 0.39 -2.53 9.08 -74.06 -0.67 -3.20 16 42 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 43 H 0.06 0.08 8.14 -2.39 -0.02 0.07 16 44 H 0.09 -0.88 8.14 -2.38 -0.02 -0.90 16 45 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 46 H 0.13 0.87 8.06 -2.91 -0.02 0.85 16 Total: 0.00 -23.45 373.01 -3.02 -26.47 By element: Atomic # 1 Polarization: -14.51 SS G_CDS: -1.07 Total: -15.58 kcal Atomic # 6 Polarization: -0.14 SS G_CDS: 3.12 Total: 2.98 kcal Atomic # 7 Polarization: 3.06 SS G_CDS: -2.25 Total: 0.81 kcal Atomic # 8 Polarization: -10.83 SS G_CDS: -4.87 Total: -15.69 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: 2.04 Total: 1.01 kcal Total: -23.45 -3.02 -26.47 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.676 kcal (2) G-P(sol) polarization free energy of solvation -23.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.126 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.021 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.471 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds