Wall clock time and date at job start Sat Mar 6 2021 15:01:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46900 * 2 1 4 4 C 1.50693 * 109.47437 * 120.00157 * 2 1 3 5 5 C 1.38244 * 119.97178 * 245.02126 * 4 2 1 6 6 C 1.38290 * 120.11180 * 179.97438 * 5 4 2 7 7 C 1.38115 * 120.05791 * 359.97438 * 6 5 4 8 8 C 1.38754 * 119.94234 * 359.76774 * 7 6 5 9 9 O 1.35904 * 120.05978 * 180.27971 * 8 7 6 10 10 C 1.42903 * 116.99671 * 0.20027 * 9 8 7 11 11 C 1.52999 * 109.47304 * 180.02562 * 10 9 8 12 12 C 1.52993 * 109.47417 * 179.97438 * 11 10 9 13 13 C 1.50698 * 109.47256 * 180.02562 * 12 11 10 14 14 O 1.21278 * 120.00175 * 0.02562 * 13 12 11 15 15 N 1.34780 * 120.00053 * 180.02562 * 13 12 11 16 16 C 1.46503 * 119.99778 * 180.02562 * 15 13 12 17 17 H 1.08998 * 109.47164 * 34.99965 * 16 15 13 18 18 C 1.52998 * 109.46706 * 154.99853 * 16 15 13 19 19 C 1.52999 * 109.47226 * 180.02562 * 18 16 15 20 20 C 1.53001 * 109.46947 * 299.99947 * 19 18 16 21 21 H 1.08998 * 109.47257 * 299.99789 * 20 19 18 22 22 O 1.42900 * 109.47221 * 179.97438 * 20 19 18 23 23 C 1.53006 * 109.46924 * 59.99846 * 20 19 18 24 24 C 1.52991 * 109.47224 * 299.99750 * 23 20 19 25 25 C 1.38167 * 119.97449 * 65.00394 * 4 2 1 26 26 H 0.96695 * 113.99916 * 299.99811 * 1 2 3 27 27 H 1.09005 * 109.47470 * 240.00312 * 2 1 3 28 28 H 1.48500 * 109.99993 * 178.68658 * 3 2 1 29 29 H 1.48504 * 109.99986 * 299.99984 * 3 2 1 30 30 H 1.08008 * 119.94585 * 0.02562 * 5 4 2 31 31 H 1.08007 * 119.97167 * 180.02562 * 6 5 4 32 32 H 1.08000 * 120.03345 * 180.02562 * 7 6 5 33 33 H 1.09002 * 109.47603 * 300.00651 * 10 9 8 34 34 H 1.09001 * 109.47062 * 60.00447 * 10 9 8 35 35 H 1.09002 * 109.47216 * 300.00759 * 11 10 9 36 36 H 1.09001 * 109.46801 * 60.00158 * 11 10 9 37 37 H 1.09002 * 109.47550 * 300.00558 * 12 11 10 38 38 H 1.09001 * 109.47002 * 60.00285 * 12 11 10 39 39 H 0.96999 * 119.99859 * 359.97438 * 15 13 12 40 40 H 1.09004 * 109.47551 * 299.99669 * 18 16 15 41 41 H 1.08998 * 109.47218 * 60.00144 * 18 16 15 42 42 H 1.08998 * 109.46970 * 59.99912 * 19 18 16 43 43 H 1.08996 * 109.47386 * 180.02562 * 19 18 16 44 44 H 0.96707 * 113.99934 * 180.02562 * 22 20 19 45 45 H 1.08998 * 109.47200 * 59.99908 * 23 20 19 46 46 H 1.09006 * 109.46882 * 180.02562 * 23 20 19 47 47 H 1.09004 * 109.47833 * 300.00235 * 24 23 20 48 48 H 1.09003 * 109.47468 * 179.97438 * 24 23 20 49 49 H 1.08002 * 120.02367 * 359.97073 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6384 -0.0116 2.1910 6 6 3.1003 -0.6605 3.3215 7 6 2.8558 -2.0089 3.4937 8 6 2.1417 -2.7114 2.5335 9 8 1.8948 -4.0370 2.7032 10 6 2.3963 -4.6426 3.8964 11 6 2.0239 -6.1265 3.9106 12 6 2.5613 -6.7752 5.1878 13 6 2.1950 -8.2369 5.2014 14 8 1.5664 -8.7131 4.2800 15 7 2.5660 -9.0150 6.2375 16 6 2.2103 -10.4361 6.2503 17 1 2.2406 -10.8275 5.2335 18 6 3.2066 -11.2032 7.1220 19 6 2.8356 -12.6875 7.1350 20 6 1.4253 -12.8556 7.7039 21 1 1.3947 -12.4646 8.7208 22 8 1.0785 -14.2419 7.7155 23 6 0.4290 -12.0885 6.8322 24 6 0.8000 -10.6043 6.8192 25 6 1.6847 -2.0595 1.3976 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 3.5345 1.7704 0.0320 29 1 1.5614 2.4679 -1.2085 30 1 2.8296 1.0432 2.0589 31 1 3.6521 -0.1122 4.0708 32 1 3.2163 -2.5152 4.3769 33 1 3.4811 -4.5404 3.9277 34 1 1.9598 -4.1499 4.7652 35 1 0.9392 -6.2292 3.8791 36 1 2.4607 -6.6190 3.0419 37 1 3.6461 -6.6725 5.2188 38 1 2.1249 -6.2827 6.0567 39 1 3.0691 -8.6342 6.9742 40 1 4.2113 -11.0838 6.7165 41 1 3.1763 -10.8118 8.1388 42 1 2.8663 -13.0786 6.1181 43 1 3.5451 -13.2339 7.7564 44 1 0.1949 -14.4234 8.0642 45 1 0.4596 -12.4796 5.8152 46 1 -0.5758 -12.2079 7.2377 47 1 0.7694 -10.2131 7.8362 48 1 0.0905 -10.0578 6.1978 49 1 1.1316 -2.6049 0.6471 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:43 Heat of formation + Delta-G solvation = -147.919172 kcal Electronic energy + Delta-G solvation = -27833.758025 eV Core-core repulsion = 23726.711715 eV Total energy + Delta-G solvation = -4107.046309 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.34147 -41.12447 -39.69997 -39.13871 -37.29355 -37.04318 -34.93303 -34.45220 -32.45777 -31.98021 -31.28848 -29.84532 -28.00194 -26.76782 -24.05564 -23.95579 -23.65058 -22.77610 -21.85500 -21.50081 -20.91706 -19.18673 -18.32918 -18.16218 -17.80007 -17.53047 -17.41189 -17.16410 -16.83544 -16.48394 -16.11629 -16.03227 -15.59670 -15.37156 -15.14148 -14.98861 -14.75336 -14.49299 -14.29303 -14.14203 -14.10861 -13.53473 -13.41253 -13.37871 -13.30482 -13.08068 -12.99290 -12.73282 -12.50892 -12.40396 -12.27543 -12.25021 -11.94311 -11.83316 -11.68096 -11.60361 -11.38161 -10.93722 -10.79170 -10.46151 -10.12586 -9.91989 -9.22007 -5.02243 0.22313 0.42577 1.28698 1.59698 1.65293 1.84372 1.98838 2.30457 2.68973 3.12718 3.45801 3.48363 3.56144 3.60342 3.65398 3.76094 3.79150 3.87078 3.92133 4.00505 4.02457 4.08951 4.12606 4.15650 4.18661 4.20237 4.23859 4.30553 4.34193 4.38827 4.41820 4.54920 4.55517 4.65422 4.74119 4.87554 4.92360 4.93846 4.98311 4.99259 5.03168 5.13224 5.15383 5.24893 5.28750 5.37773 5.42483 5.45194 5.70870 6.39832 6.42241 6.58451 6.64434 7.17398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.070 4.070 3 Si 0.691 3.309 4 C -0.081 4.081 5 C -0.155 4.155 6 C -0.074 4.074 7 C -0.205 4.205 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.105 4.105 12 C -0.138 4.138 13 C 0.514 3.486 14 O -0.533 6.533 15 N -0.730 5.730 16 C 0.142 3.858 17 H 0.091 0.909 18 C -0.123 4.123 19 C -0.110 4.110 20 C 0.103 3.897 21 H 0.056 0.944 22 O -0.568 6.568 23 C -0.150 4.150 24 C -0.127 4.127 25 C -0.126 4.126 26 H 0.379 0.621 27 H 0.115 0.885 28 H -0.258 1.258 29 H -0.254 1.254 30 H 0.128 0.872 31 H 0.130 0.870 32 H 0.130 0.870 33 H 0.064 0.936 34 H 0.064 0.936 35 H 0.083 0.917 36 H 0.083 0.917 37 H 0.098 0.902 38 H 0.098 0.902 39 H 0.401 0.599 40 H 0.077 0.923 41 H 0.071 0.929 42 H 0.074 0.926 43 H 0.077 0.923 44 H 0.380 0.620 45 H 0.074 0.926 46 H 0.069 0.931 47 H 0.066 0.934 48 H 0.072 0.928 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.995 2.786 7.889 8.601 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.593 3.407 4 C -0.081 4.081 5 C -0.173 4.173 6 C -0.092 4.092 7 C -0.224 4.224 8 C 0.087 3.913 9 O -0.225 6.225 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.178 4.178 13 C 0.301 3.699 14 O -0.409 6.409 15 N -0.381 5.381 16 C 0.037 3.963 17 H 0.109 0.891 18 C -0.161 4.161 19 C -0.148 4.148 20 C 0.044 3.956 21 H 0.074 0.926 22 O -0.374 6.374 23 C -0.189 4.189 24 C -0.165 4.165 25 C -0.145 4.145 26 H 0.227 0.773 27 H 0.132 0.868 28 H -0.182 1.182 29 H -0.180 1.180 30 H 0.146 0.854 31 H 0.148 0.852 32 H 0.147 0.853 33 H 0.082 0.918 34 H 0.083 0.917 35 H 0.102 0.898 36 H 0.102 0.898 37 H 0.116 0.884 38 H 0.116 0.884 39 H 0.235 0.765 40 H 0.096 0.904 41 H 0.090 0.910 42 H 0.093 0.907 43 H 0.095 0.905 44 H 0.227 0.773 45 H 0.093 0.907 46 H 0.088 0.912 47 H 0.084 0.916 48 H 0.091 0.909 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.613 2.530 5.846 6.885 hybrid contribution -0.072 -0.342 0.795 0.869 sum 2.541 2.188 6.641 7.440 Atomic orbital electron populations 1.86521 1.16910 1.81728 1.49184 1.25122 0.85382 1.10251 0.97338 0.94686 0.81042 0.77845 0.87121 1.20141 0.97829 0.93684 0.96475 1.20901 1.01720 0.99478 0.95191 1.20912 0.97601 0.93683 0.96973 1.21310 1.04568 0.95955 1.00568 1.19029 0.94844 0.82999 0.94445 1.86090 1.74206 1.20070 1.42118 1.22825 0.98758 0.93825 0.86142 1.21229 1.03517 0.91829 0.97747 1.21532 1.03476 0.92536 1.00257 1.20585 0.78983 0.88579 0.81777 1.90756 1.39204 1.75234 1.35669 1.46089 1.58353 1.10106 1.23571 1.21047 0.93955 0.80156 1.01099 0.89093 1.21763 0.99185 0.94853 1.00330 1.21407 0.95346 0.95340 1.02746 1.21848 0.94562 0.81418 0.97755 0.92623 1.86521 1.38564 1.24476 1.87818 1.22241 0.99415 0.95275 1.01923 1.21858 0.96820 0.96272 1.01589 1.20284 1.03204 0.93741 0.97236 0.77342 0.86782 1.18249 1.17954 0.85419 0.85192 0.85260 0.91802 0.91738 0.89785 0.89815 0.88376 0.88365 0.76501 0.90416 0.91009 0.90707 0.90483 0.77277 0.90682 0.91233 0.91570 0.90932 0.84846 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.52 12.83 -35.23 -0.45 -0.98 16 2 C -0.07 -0.03 2.80 36.00 0.10 0.07 16 3 Si 0.69 -0.53 29.80 -169.99 -5.07 -5.60 16 4 C -0.08 -0.08 5.35 -104.65 -0.56 -0.64 16 5 C -0.16 0.03 8.67 -39.56 -0.34 -0.31 16 6 C -0.07 0.03 10.04 -39.61 -0.40 -0.36 16 7 C -0.21 -0.05 9.04 -39.44 -0.36 -0.41 16 8 C 0.13 0.28 6.69 -39.22 -0.26 0.02 16 9 O -0.31 -0.76 10.14 -19.44 -0.20 -0.96 16 10 C 0.06 -0.06 4.74 37.16 0.18 0.12 16 11 C -0.11 0.05 4.87 -26.74 -0.13 -0.08 16 12 C -0.14 0.40 5.70 -27.89 -0.16 0.24 16 13 C 0.51 0.15 7.79 -10.98 -0.09 0.06 16 14 O -0.53 -2.63 15.64 5.56 0.09 -2.55 16 15 N -0.73 1.46 5.08 -53.81 -0.27 1.18 16 16 C 0.14 -0.13 2.45 -67.93 -0.17 -0.30 16 17 H 0.09 0.14 7.58 -51.93 -0.39 -0.26 16 18 C -0.12 0.30 5.39 -26.73 -0.14 0.16 16 19 C -0.11 0.10 5.57 -26.73 -0.15 -0.05 16 20 C 0.10 -0.08 3.47 -26.73 -0.09 -0.17 16 21 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 22 O -0.57 -0.40 13.32 -35.23 -0.47 -0.87 16 23 C -0.15 0.12 5.54 -26.73 -0.15 -0.03 16 24 C -0.13 0.10 5.50 -26.74 -0.15 -0.05 16 25 C -0.13 -0.30 9.62 -39.43 -0.38 -0.68 16 26 H 0.38 -1.14 8.70 45.56 0.40 -0.74 16 27 H 0.11 0.11 7.96 -51.93 -0.41 -0.31 16 28 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 29 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 30 H 0.13 -0.29 4.90 -52.48 -0.26 -0.54 16 31 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 32 H 0.13 -0.24 6.30 -52.49 -0.33 -0.57 16 33 H 0.06 -0.15 7.65 -51.93 -0.40 -0.54 16 34 H 0.06 -0.16 7.67 -51.93 -0.40 -0.56 16 35 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 36 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 37 H 0.10 -0.47 8.14 -51.93 -0.42 -0.90 16 38 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 39 H 0.40 -1.97 8.60 -40.82 -0.35 -2.32 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 42 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 43 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.38 -1.17 9.08 45.56 0.41 -0.76 16 45 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 46 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 47 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 48 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 49 H 0.13 0.37 8.06 -52.49 -0.42 -0.05 16 LS Contribution 394.59 15.07 5.95 5.95 Total: 0.00 -9.91 394.59 -10.93 -20.84 By element: Atomic # 1 Polarization: -7.35 SS G_CDS: -7.27 Total: -14.61 kcal Atomic # 6 Polarization: 0.83 SS G_CDS: -3.24 Total: -2.42 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -0.27 Total: 1.18 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -1.03 Total: -5.35 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.07 Total: -5.60 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -9.91 -10.93 -20.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.075 kcal (2) G-P(sol) polarization free energy of solvation -9.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.985 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.934 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.844 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds