Wall clock time and date at job start Sat Mar 6 2021 15:01:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46900 * 2 1 4 4 C 1.50693 * 109.47437 * 120.00157 * 2 1 3 5 5 C 1.38244 * 119.97178 * 245.02126 * 4 2 1 6 6 C 1.38290 * 120.11180 * 179.97438 * 5 4 2 7 7 C 1.38115 * 120.05791 * 359.97438 * 6 5 4 8 8 C 1.38754 * 119.94234 * 359.76774 * 7 6 5 9 9 O 1.35904 * 120.05978 * 180.27971 * 8 7 6 10 10 C 1.42903 * 116.99671 * 0.20027 * 9 8 7 11 11 C 1.52999 * 109.47304 * 180.02562 * 10 9 8 12 12 C 1.52993 * 109.47417 * 179.97438 * 11 10 9 13 13 C 1.50698 * 109.47256 * 180.02562 * 12 11 10 14 14 O 1.21278 * 120.00175 * 0.02562 * 13 12 11 15 15 N 1.34780 * 120.00053 * 180.02562 * 13 12 11 16 16 C 1.46503 * 119.99778 * 180.02562 * 15 13 12 17 17 H 1.08998 * 109.47164 * 34.99965 * 16 15 13 18 18 C 1.52998 * 109.46706 * 154.99853 * 16 15 13 19 19 C 1.52999 * 109.47226 * 180.02562 * 18 16 15 20 20 C 1.53001 * 109.46947 * 299.99947 * 19 18 16 21 21 H 1.08998 * 109.47257 * 299.99789 * 20 19 18 22 22 O 1.42900 * 109.47221 * 179.97438 * 20 19 18 23 23 C 1.53006 * 109.46924 * 59.99846 * 20 19 18 24 24 C 1.52991 * 109.47224 * 299.99750 * 23 20 19 25 25 C 1.38167 * 119.97449 * 65.00394 * 4 2 1 26 26 H 0.96695 * 113.99916 * 299.99811 * 1 2 3 27 27 H 1.09005 * 109.47470 * 240.00312 * 2 1 3 28 28 H 1.48500 * 109.99993 * 178.68658 * 3 2 1 29 29 H 1.48504 * 109.99986 * 299.99984 * 3 2 1 30 30 H 1.08008 * 119.94585 * 0.02562 * 5 4 2 31 31 H 1.08007 * 119.97167 * 180.02562 * 6 5 4 32 32 H 1.08000 * 120.03345 * 180.02562 * 7 6 5 33 33 H 1.09002 * 109.47603 * 300.00651 * 10 9 8 34 34 H 1.09001 * 109.47062 * 60.00447 * 10 9 8 35 35 H 1.09002 * 109.47216 * 300.00759 * 11 10 9 36 36 H 1.09001 * 109.46801 * 60.00158 * 11 10 9 37 37 H 1.09002 * 109.47550 * 300.00558 * 12 11 10 38 38 H 1.09001 * 109.47002 * 60.00285 * 12 11 10 39 39 H 0.96999 * 119.99859 * 359.97438 * 15 13 12 40 40 H 1.09004 * 109.47551 * 299.99669 * 18 16 15 41 41 H 1.08998 * 109.47218 * 60.00144 * 18 16 15 42 42 H 1.08998 * 109.46970 * 59.99912 * 19 18 16 43 43 H 1.08996 * 109.47386 * 180.02562 * 19 18 16 44 44 H 0.96707 * 113.99934 * 180.02562 * 22 20 19 45 45 H 1.08998 * 109.47200 * 59.99908 * 23 20 19 46 46 H 1.09006 * 109.46882 * 180.02562 * 23 20 19 47 47 H 1.09004 * 109.47833 * 300.00235 * 24 23 20 48 48 H 1.09003 * 109.47468 * 179.97438 * 24 23 20 49 49 H 1.08002 * 120.02367 * 359.97073 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6384 -0.0116 2.1910 6 6 3.1003 -0.6605 3.3215 7 6 2.8558 -2.0089 3.4937 8 6 2.1417 -2.7114 2.5335 9 8 1.8948 -4.0370 2.7032 10 6 2.3963 -4.6426 3.8964 11 6 2.0239 -6.1265 3.9106 12 6 2.5613 -6.7752 5.1878 13 6 2.1950 -8.2369 5.2014 14 8 1.5664 -8.7131 4.2800 15 7 2.5660 -9.0150 6.2375 16 6 2.2103 -10.4361 6.2503 17 1 2.2406 -10.8275 5.2335 18 6 3.2066 -11.2032 7.1220 19 6 2.8356 -12.6875 7.1350 20 6 1.4253 -12.8556 7.7039 21 1 1.3947 -12.4646 8.7208 22 8 1.0785 -14.2419 7.7155 23 6 0.4290 -12.0885 6.8322 24 6 0.8000 -10.6043 6.8192 25 6 1.6847 -2.0595 1.3976 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 3.5345 1.7704 0.0320 29 1 1.5614 2.4679 -1.2085 30 1 2.8296 1.0432 2.0589 31 1 3.6521 -0.1122 4.0708 32 1 3.2163 -2.5152 4.3769 33 1 3.4811 -4.5404 3.9277 34 1 1.9598 -4.1499 4.7652 35 1 0.9392 -6.2292 3.8791 36 1 2.4607 -6.6190 3.0419 37 1 3.6461 -6.6725 5.2188 38 1 2.1249 -6.2827 6.0567 39 1 3.0691 -8.6342 6.9742 40 1 4.2113 -11.0838 6.7165 41 1 3.1763 -10.8118 8.1388 42 1 2.8663 -13.0786 6.1181 43 1 3.5451 -13.2339 7.7564 44 1 0.1949 -14.4234 8.0642 45 1 0.4596 -12.4796 5.8152 46 1 -0.5758 -12.2079 7.2377 47 1 0.7694 -10.2131 7.8362 48 1 0.0905 -10.0578 6.1978 49 1 1.1316 -2.6049 0.6471 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:41 Heat of formation + Delta-G solvation = -151.058035 kcal Electronic energy + Delta-G solvation = -27833.894136 eV Core-core repulsion = 23726.711715 eV Total energy + Delta-G solvation = -4107.182421 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.34670 -41.12691 -39.68409 -39.16383 -37.31555 -37.04270 -34.91845 -34.42920 -32.45795 -31.90726 -31.28388 -29.81606 -27.90970 -26.78186 -24.02630 -23.87969 -23.65111 -22.73251 -21.83531 -21.47775 -20.85540 -19.19695 -18.29880 -18.12126 -17.83389 -17.47289 -17.38330 -17.14263 -16.85025 -16.47151 -16.14177 -16.00524 -15.54040 -15.39774 -15.11499 -14.96096 -14.73925 -14.50150 -14.29892 -14.17719 -14.14077 -13.45352 -13.33421 -13.29158 -13.26330 -13.06051 -12.94878 -12.71526 -12.46197 -12.32504 -12.25131 -12.21035 -12.02035 -11.77087 -11.61998 -11.60027 -11.31533 -10.98512 -10.78412 -10.49148 -10.10629 -9.93310 -9.24411 -4.99391 0.21595 0.40871 1.29279 1.60542 1.65455 1.89915 1.98974 2.36745 2.68456 3.25072 3.50281 3.55873 3.64036 3.67983 3.68737 3.84957 3.87285 3.97084 3.99926 4.07439 4.11680 4.17539 4.20482 4.25269 4.27597 4.33661 4.37755 4.40217 4.41594 4.42863 4.52618 4.60710 4.65265 4.69304 4.86191 4.94483 4.98289 4.98471 5.00063 5.06390 5.08877 5.15362 5.21733 5.28640 5.31076 5.38864 5.45446 5.49240 5.75274 6.42874 6.54114 6.74349 6.83737 7.25652 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.085 4.085 3 Si 0.794 3.206 4 C -0.086 4.086 5 C -0.158 4.158 6 C -0.072 4.072 7 C -0.205 4.205 8 C 0.115 3.885 9 O -0.340 6.340 10 C 0.058 3.942 11 C -0.102 4.102 12 C -0.126 4.126 13 C 0.507 3.493 14 O -0.591 6.591 15 N -0.714 5.714 16 C 0.142 3.858 17 H 0.058 0.942 18 C -0.112 4.112 19 C -0.114 4.114 20 C 0.104 3.896 21 H 0.073 0.927 22 O -0.590 6.590 23 C -0.147 4.147 24 C -0.121 4.121 25 C -0.154 4.154 26 H 0.396 0.604 27 H 0.100 0.900 28 H -0.282 1.282 29 H -0.300 1.300 30 H 0.151 0.849 31 H 0.161 0.839 32 H 0.154 0.846 33 H 0.083 0.917 34 H 0.086 0.914 35 H 0.058 0.942 36 H 0.057 0.943 37 H 0.128 0.872 38 H 0.130 0.870 39 H 0.420 0.580 40 H 0.084 0.916 41 H 0.095 0.905 42 H 0.055 0.945 43 H 0.079 0.921 44 H 0.394 0.606 45 H 0.052 0.948 46 H 0.078 0.922 47 H 0.085 0.915 48 H 0.047 0.953 49 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.532 4.474 11.086 12.466 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.194 4.194 3 Si 0.699 3.301 4 C -0.086 4.086 5 C -0.176 4.176 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.070 3.930 9 O -0.255 6.255 10 C -0.016 4.016 11 C -0.140 4.140 12 C -0.166 4.166 13 C 0.295 3.705 14 O -0.471 6.471 15 N -0.366 5.366 16 C 0.037 3.963 17 H 0.076 0.924 18 C -0.149 4.149 19 C -0.152 4.152 20 C 0.045 3.955 21 H 0.091 0.909 22 O -0.399 6.399 23 C -0.185 4.185 24 C -0.159 4.159 25 C -0.173 4.173 26 H 0.245 0.755 27 H 0.118 0.882 28 H -0.209 1.209 29 H -0.229 1.229 30 H 0.168 0.832 31 H 0.179 0.821 32 H 0.172 0.828 33 H 0.101 0.899 34 H 0.104 0.896 35 H 0.077 0.923 36 H 0.076 0.924 37 H 0.146 0.854 38 H 0.148 0.852 39 H 0.257 0.743 40 H 0.102 0.898 41 H 0.113 0.887 42 H 0.074 0.926 43 H 0.098 0.902 44 H 0.244 0.756 45 H 0.071 0.929 46 H 0.097 0.903 47 H 0.104 0.896 48 H 0.066 0.934 49 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 4.149 4.200 9.113 10.859 hybrid contribution -0.588 -0.932 -0.243 1.129 sum 3.561 3.269 8.870 10.101 Atomic orbital electron populations 1.86475 1.17343 1.82316 1.50434 1.25403 0.85307 1.11792 0.96854 0.93558 0.77728 0.74264 0.84593 1.20217 0.98216 0.93201 0.97009 1.21190 1.00949 1.00531 0.94890 1.21331 0.96871 0.93533 0.97228 1.21612 1.03694 0.96390 1.00686 1.19211 0.95711 0.83071 0.95001 1.86057 1.74930 1.20598 1.43886 1.22995 0.99959 0.92899 0.85754 1.21153 1.01878 0.92702 0.98309 1.21534 1.05330 0.89870 0.99840 1.21234 0.78019 0.89988 0.81222 1.90740 1.41951 1.76474 1.37919 1.45955 1.57616 1.09468 1.23562 1.20950 0.94660 0.80948 0.99765 0.92395 1.21684 0.98699 0.93411 1.01139 1.21446 0.95597 0.96469 1.01669 1.21911 0.94286 0.80865 0.98423 0.90881 1.86485 1.39898 1.25334 1.88149 1.22198 1.00173 0.95281 1.00850 1.21789 0.96187 0.95938 1.02025 1.20333 1.04564 0.94687 0.97703 0.75451 0.88235 1.20903 1.22877 0.83215 0.82122 0.82807 0.89874 0.89619 0.92269 0.92445 0.85374 0.85225 0.74275 0.89766 0.88665 0.92613 0.90232 0.75642 0.92888 0.90348 0.89614 0.93400 0.86899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.81 12.83 -148.98 -1.91 -3.72 16 2 C -0.08 -0.18 2.80 71.23 0.20 0.02 16 3 Si 0.79 -1.36 29.80 68.60 2.04 0.69 16 4 C -0.09 -0.24 5.35 -19.88 -0.11 -0.34 16 5 C -0.16 0.25 8.67 22.28 0.19 0.44 16 6 C -0.07 0.23 10.04 22.25 0.22 0.45 16 7 C -0.21 0.19 9.04 22.36 0.20 0.39 16 8 C 0.12 0.59 6.69 22.51 0.15 0.74 16 9 O -0.34 -2.17 10.14 -92.47 -0.94 -3.11 16 10 C 0.06 -0.14 4.74 71.98 0.34 0.20 16 11 C -0.10 -0.02 4.87 30.59 0.15 0.13 16 12 C -0.13 0.87 5.70 29.85 0.17 1.04 16 13 C 0.51 0.61 7.79 87.66 0.68 1.29 16 14 O -0.59 -7.53 15.64 -3.02 -0.05 -7.58 16 15 N -0.71 3.20 5.08 -442.53 -2.25 0.95 16 16 C 0.14 -0.17 2.45 44.99 0.11 -0.06 16 17 H 0.06 0.34 7.58 -2.39 -0.02 0.32 16 18 C -0.11 0.64 5.39 30.59 0.16 0.80 16 19 C -0.11 0.17 5.57 30.59 0.17 0.34 16 20 C 0.10 -0.16 3.47 30.60 0.11 -0.05 16 21 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 22 O -0.59 -1.03 13.32 -148.98 -1.98 -3.01 16 23 C -0.15 0.09 5.54 30.59 0.17 0.26 16 24 C -0.12 0.11 5.50 30.59 0.17 0.28 16 25 C -0.15 -1.06 9.62 22.37 0.22 -0.85 16 26 H 0.40 -2.15 8.70 -74.06 -0.64 -2.80 16 27 H 0.10 0.42 7.96 -2.38 -0.02 0.40 16 28 H -0.28 -0.68 7.11 99.48 0.71 0.03 16 29 H -0.30 -1.77 7.11 99.48 0.71 -1.06 16 30 H 0.15 -1.00 4.90 -2.91 -0.01 -1.02 16 31 H 0.16 -1.51 8.06 -2.91 -0.02 -1.53 16 32 H 0.15 -1.02 6.30 -2.91 -0.02 -1.04 16 33 H 0.08 -0.53 7.65 -2.39 -0.02 -0.55 16 34 H 0.09 -0.58 7.67 -2.39 -0.02 -0.59 16 35 H 0.06 0.29 8.10 -2.39 -0.02 0.27 16 36 H 0.06 0.30 8.10 -2.39 -0.02 0.28 16 37 H 0.13 -1.59 8.14 -2.39 -0.02 -1.61 16 38 H 0.13 -1.65 8.14 -2.39 -0.02 -1.67 16 39 H 0.42 -5.06 8.60 -92.71 -0.80 -5.86 16 40 H 0.08 -0.55 8.14 -2.38 -0.02 -0.57 16 41 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 42 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 43 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 44 H 0.39 -2.36 9.08 -74.05 -0.67 -3.03 16 45 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 46 H 0.08 -0.20 8.14 -2.38 -0.02 -0.22 16 47 H 0.09 -0.40 8.14 -2.38 -0.02 -0.42 16 48 H 0.05 0.21 8.14 -2.39 -0.02 0.19 16 49 H 0.11 1.08 8.06 -2.91 -0.02 1.06 16 Total: 0.00 -28.43 394.59 -2.88 -31.31 By element: Atomic # 1 Polarization: -19.52 SS G_CDS: -1.11 Total: -20.63 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: 3.31 Total: 5.09 kcal Atomic # 7 Polarization: 3.20 SS G_CDS: -2.25 Total: 0.95 kcal Atomic # 8 Polarization: -12.53 SS G_CDS: -4.88 Total: -17.41 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: 2.04 Total: 0.69 kcal Total: -28.43 -2.88 -31.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.748 kcal (2) G-P(sol) polarization free energy of solvation -28.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.179 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.879 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.310 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.058 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds