Wall clock time and date at job start Sat Mar 6 2021 15:01:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86300 * 109.47241 * 2 1 4 4 C 1.50700 * 109.47341 * 240.00126 * 2 1 3 5 5 C 1.38264 * 119.94555 * 119.72100 * 4 2 1 6 6 C 1.38143 * 120.05501 * 179.73030 * 5 4 2 7 7 C 1.38739 * 119.94427 * 0.54557 * 6 5 4 8 8 O 1.35892 * 120.05532 * 179.75042 * 7 6 5 9 9 C 1.42900 * 117.00484 * 359.97438 * 8 7 6 10 10 C 1.50693 * 109.47523 * 179.97438 * 9 8 7 11 11 C 1.36418 * 125.79952 * 89.71607 * 10 9 8 12 12 C 1.47386 * 127.19415 * 359.97438 * 11 10 9 13 13 O 1.21611 * 119.99799 * 359.97438 * 12 11 10 14 14 N 1.34775 * 120.00106 * 180.02562 * 12 11 10 15 15 C 1.46493 * 120.00016 * 180.02562 * 14 12 11 16 16 H 1.08997 * 109.47509 * 34.99265 * 15 14 12 17 17 C 1.52999 * 109.47459 * 155.00064 * 15 14 12 18 18 C 1.52998 * 109.47439 * 179.97438 * 17 15 14 19 19 C 1.53001 * 109.47077 * 299.99609 * 18 17 15 20 20 H 1.09006 * 109.46882 * 300.00209 * 19 18 17 21 21 O 1.42897 * 109.47238 * 179.97438 * 19 18 17 22 22 C 1.52999 * 109.46962 * 59.99674 * 19 18 17 23 23 C 1.52997 * 109.47495 * 300.00466 * 22 19 18 24 24 C 1.47025 * 105.61570 * 179.86942 * 11 10 9 25 25 C 1.34175 * 105.95238 * 0.39468 * 24 11 10 26 26 O 1.33647 * 125.80411 * 270.02352 * 10 9 8 27 27 C 1.38732 * 119.88547 * 359.73141 * 7 6 5 28 28 C 1.38149 * 119.94758 * 359.97438 * 27 7 6 29 29 H 0.96693 * 114.00306 * 59.99646 * 1 2 3 30 30 H 1.09000 * 109.47349 * 120.00016 * 2 1 3 31 31 H 1.48506 * 110.00048 * 298.68597 * 3 2 1 32 32 H 1.48502 * 109.99996 * 59.99922 * 3 2 1 33 33 H 1.08002 * 119.97450 * 359.97438 * 5 4 2 34 34 H 1.08000 * 120.02735 * 180.28019 * 6 5 4 35 35 H 1.09008 * 109.46594 * 300.00118 * 9 8 7 36 36 H 1.08998 * 109.47165 * 59.99866 * 9 8 7 37 37 H 0.97004 * 119.99902 * 0.02562 * 14 12 11 38 38 H 1.09001 * 109.46724 * 299.99692 * 17 15 14 39 39 H 1.08997 * 109.47411 * 59.99142 * 17 15 14 40 40 H 1.08993 * 109.47198 * 59.99568 * 18 17 15 41 41 H 1.08999 * 109.47305 * 179.97438 * 18 17 15 42 42 H 0.96702 * 113.99606 * 179.97438 * 21 19 18 43 43 H 1.09006 * 109.46885 * 60.00536 * 22 19 18 44 44 H 1.09001 * 109.47019 * 180.02562 * 22 19 18 45 45 H 1.09001 * 109.46794 * 299.99573 * 23 22 19 46 46 H 1.08999 * 109.47310 * 180.02562 * 23 22 19 47 47 H 1.07997 * 127.02690 * 180.10562 * 24 11 10 48 48 H 1.08002 * 125.43773 * 179.79993 * 25 24 11 49 49 H 1.07998 * 120.02974 * 180.02562 * 27 7 6 50 50 H 1.07992 * 119.97601 * 179.97438 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7214 -0.0356 -2.1427 6 6 3.1878 -0.6862 -3.2686 7 6 2.8534 -2.0145 -3.4893 8 8 3.3068 -2.6552 -4.5987 9 6 4.1231 -1.8999 -5.4961 10 6 4.5289 -2.7690 -6.6583 11 6 3.8377 -2.9149 -7.8253 12 6 2.5669 -2.2663 -8.1952 13 8 2.0234 -1.5059 -7.4171 14 7 2.0069 -2.5166 -9.3952 15 6 0.7441 -1.8714 -9.7630 16 1 0.7145 -0.8655 -9.3443 17 6 0.6366 -1.7927 -11.2872 18 6 -0.6825 -1.1195 -11.6714 19 6 -1.8521 -1.9369 -11.1192 20 1 -1.8220 -2.9429 -11.5380 21 8 -3.0841 -1.3079 -11.4775 22 6 -1.7445 -2.0157 -9.5950 23 6 -0.4254 -2.6888 -9.2109 24 6 4.6264 -3.8524 -8.6380 25 6 5.6920 -4.1811 -7.8918 26 8 5.6243 -3.5324 -6.7187 27 6 2.0558 -2.6876 -2.5753 28 6 1.5969 -2.0343 -1.4478 29 1 -0.3933 0.4417 -0.7649 30 1 1.7923 -0.5138 0.8900 31 1 1.5878 2.4586 -1.2242 32 1 1.5615 2.4679 1.2085 33 1 2.9775 0.9998 -1.9730 34 1 3.8086 -0.1600 -3.9786 35 1 3.5610 -1.0410 -5.8630 36 1 5.0145 -1.5542 -4.9728 37 1 2.4399 -3.1239 -10.0153 38 1 1.4700 -1.2107 -11.6806 39 1 0.6662 -2.7986 -11.7060 40 1 -0.7126 -0.1137 -11.2526 41 1 -0.7589 -1.0631 -12.7572 42 1 -3.8701 -1.7731 -11.1600 43 1 -1.7746 -1.0098 -9.1762 44 1 -2.5775 -2.5984 -9.2017 45 1 -0.3954 -3.6948 -9.6296 46 1 -0.3491 -2.7454 -8.1250 47 1 4.3932 -4.2080 -9.6307 48 1 6.4790 -4.8588 -8.1881 49 1 1.7944 -3.7217 -2.7446 50 1 0.9756 -2.5577 -0.7363 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:01:57 Heat of formation + Delta-G solvation = -112.225704 kcal Electronic energy + Delta-G solvation = -33915.934524 eV Core-core repulsion = 29262.613005 eV Total energy + Delta-G solvation = -4653.321519 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -43.76165 -41.21022 -41.00644 -39.52098 -39.14638 -37.22483 -36.98497 -34.70032 -33.87862 -32.82777 -31.96519 -31.91778 -31.34099 -29.64419 -27.77447 -26.12375 -24.85355 -23.95680 -23.75513 -23.16432 -22.31638 -21.86887 -21.43362 -20.66374 -19.41457 -19.19283 -18.30253 -18.24481 -17.49154 -17.34664 -17.21317 -16.86720 -16.74726 -16.42588 -16.14324 -16.05655 -15.78463 -15.62987 -15.53098 -15.37194 -14.73063 -14.72175 -14.56913 -14.27691 -14.23905 -14.19290 -13.95377 -13.51513 -13.42542 -13.40534 -13.32817 -13.12647 -13.00065 -12.49535 -12.26288 -12.18249 -12.05559 -12.02262 -11.82913 -11.55694 -11.36939 -11.01887 -10.98499 -10.81144 -10.52785 -10.14710 -9.96006 -9.88211 -9.13255 -4.92016 0.01704 0.37052 0.38746 0.90408 1.34746 1.47124 1.64618 2.01208 2.05544 2.16354 2.51964 2.73691 3.13615 3.27334 3.44238 3.48617 3.60108 3.62454 3.65134 3.73385 3.83074 3.92102 3.93410 3.96309 4.04922 4.10898 4.14244 4.19591 4.29738 4.31206 4.34532 4.35234 4.50355 4.51518 4.59173 4.59837 4.71820 4.74178 4.75388 4.88500 4.94487 5.01191 5.02088 5.04539 5.07538 5.17414 5.23089 5.25982 5.34206 5.43032 5.56265 5.76194 5.82664 6.35896 6.42452 6.47219 6.65504 7.16036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.680 3.320 4 C -0.157 4.157 5 C -0.074 4.074 6 C -0.202 4.202 7 C 0.143 3.857 8 O -0.304 6.304 9 C 0.136 3.864 10 C 0.065 3.935 11 C -0.211 4.211 12 C 0.590 3.410 13 O -0.532 6.532 14 N -0.719 5.719 15 C 0.145 3.855 16 H 0.093 0.907 17 C -0.124 4.124 18 C -0.110 4.110 19 C 0.103 3.897 20 H 0.056 0.944 21 O -0.568 6.568 22 C -0.149 4.149 23 C -0.127 4.127 24 C -0.196 4.196 25 C -0.014 4.014 26 O -0.165 6.165 27 C -0.149 4.149 28 C -0.052 4.052 29 H 0.376 0.624 30 H 0.117 0.883 31 H -0.260 1.260 32 H -0.258 1.258 33 H 0.130 0.870 34 H 0.132 0.868 35 H 0.115 0.885 36 H 0.084 0.916 37 H 0.401 0.599 38 H 0.078 0.922 39 H 0.072 0.928 40 H 0.074 0.926 41 H 0.077 0.923 42 H 0.380 0.620 43 H 0.074 0.926 44 H 0.069 0.931 45 H 0.066 0.934 46 H 0.073 0.927 47 H 0.161 0.839 48 H 0.214 0.786 49 H 0.133 0.867 50 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.144 -2.606 -4.013 6.330 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.582 3.418 4 C -0.157 4.157 5 C -0.092 4.092 6 C -0.221 4.221 7 C 0.098 3.902 8 O -0.218 6.218 9 C 0.061 3.939 10 C 0.012 3.988 11 C -0.215 4.215 12 C 0.378 3.622 13 O -0.410 6.410 14 N -0.369 5.369 15 C 0.040 3.960 16 H 0.111 0.889 17 C -0.162 4.162 18 C -0.148 4.148 19 C 0.044 3.956 20 H 0.074 0.926 21 O -0.374 6.374 22 C -0.188 4.188 23 C -0.166 4.166 24 C -0.216 4.216 25 C -0.081 4.081 26 O -0.060 6.060 27 C -0.167 4.167 28 C -0.070 4.070 29 H 0.224 0.776 30 H 0.135 0.865 31 H -0.185 1.185 32 H -0.183 1.183 33 H 0.147 0.853 34 H 0.150 0.850 35 H 0.133 0.867 36 H 0.102 0.898 37 H 0.235 0.765 38 H 0.097 0.903 39 H 0.090 0.910 40 H 0.093 0.907 41 H 0.095 0.905 42 H 0.227 0.773 43 H 0.093 0.907 44 H 0.088 0.912 45 H 0.085 0.915 46 H 0.092 0.908 47 H 0.179 0.821 48 H 0.231 0.769 49 H 0.151 0.849 50 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 4.225 -1.317 -3.029 5.363 hybrid contribution -1.107 -0.998 -0.963 1.775 sum 3.118 -2.315 -3.992 5.569 Atomic orbital electron populations 1.86584 1.17862 1.79935 1.49362 1.24937 0.83836 1.10705 0.98397 0.95126 0.91742 0.74734 0.80196 1.20170 1.02062 0.95481 0.98029 1.20778 0.96099 0.99159 0.93133 1.21181 1.06084 0.94147 1.00655 1.18957 0.93977 0.91091 0.86205 1.86083 1.64707 1.39678 1.31289 1.21106 0.95188 0.91468 0.86136 1.21948 0.86245 0.94917 0.95736 1.21234 0.98559 1.05189 0.96549 1.17184 0.82935 0.80553 0.81549 1.90802 1.63437 1.36602 1.50169 1.45822 1.24670 1.48708 1.17742 1.21062 0.82347 0.97763 0.94784 0.88926 1.21768 0.98166 1.02069 0.94167 1.21398 0.91718 0.99793 1.01854 1.21849 0.84768 0.95672 0.93306 0.92607 1.86517 1.15620 1.55176 1.80063 1.22237 0.97711 1.02270 0.96564 1.21867 0.93510 0.99169 1.02057 1.22892 0.95842 1.01128 1.01691 1.24066 1.01454 0.99131 0.83441 1.83800 1.39137 1.46614 1.36436 1.20488 1.00723 1.01133 0.94394 1.20821 0.96847 0.93460 0.95856 0.77645 0.86487 1.18529 1.18284 0.85300 0.85027 0.86691 0.89775 0.76453 0.90342 0.90977 0.90701 0.90454 0.77276 0.90695 0.91231 0.91536 0.90833 0.82095 0.76907 0.84935 0.84865 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.09 12.77 -35.23 -0.45 -1.54 16 2 C -0.07 -0.04 2.82 36.01 0.10 0.06 16 3 Si 0.68 -0.14 29.78 -169.99 -5.06 -5.20 16 4 C -0.16 -0.19 5.39 -104.60 -0.56 -0.76 16 5 C -0.07 -0.06 8.66 -39.61 -0.34 -0.41 16 6 C -0.20 -0.30 9.04 -39.43 -0.36 -0.65 16 7 C 0.14 0.42 6.69 -39.21 -0.26 0.16 16 8 O -0.30 -1.10 10.12 -19.40 -0.20 -1.30 16 9 C 0.14 0.21 4.73 36.00 0.17 0.38 16 10 C 0.06 0.13 7.00 -34.97 -0.24 -0.12 16 11 C -0.21 -0.31 6.31 -103.27 -0.65 -0.96 16 12 C 0.59 1.42 7.78 -12.54 -0.10 1.32 16 13 O -0.53 -2.89 14.52 5.27 0.08 -2.81 16 14 N -0.72 0.36 5.07 -54.90 -0.28 0.08 16 15 C 0.14 -0.05 2.45 -67.93 -0.17 -0.22 16 16 H 0.09 0.15 7.58 -51.93 -0.39 -0.24 16 17 C -0.12 0.26 5.39 -26.73 -0.14 0.12 16 18 C -0.11 0.08 5.57 -26.73 -0.15 -0.07 16 19 C 0.10 -0.05 3.47 -26.73 -0.09 -0.15 16 20 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 21 O -0.57 -0.47 13.32 -35.23 -0.47 -0.94 16 22 C -0.15 0.07 5.54 -26.73 -0.15 -0.07 16 23 C -0.13 0.02 5.49 -26.73 -0.15 -0.13 16 24 C -0.20 0.28 10.60 -37.45 -0.40 -0.11 16 25 C -0.01 0.02 12.03 29.30 0.35 0.38 16 26 O -0.16 -0.18 10.52 7.65 0.08 -0.10 16 27 C -0.15 -0.37 9.99 -39.43 -0.39 -0.76 16 28 C -0.05 -0.09 9.61 -39.60 -0.38 -0.47 16 29 H 0.38 -0.19 8.70 45.56 0.40 0.20 16 30 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 31 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 32 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 33 H 0.13 -0.14 4.87 -52.49 -0.26 -0.40 16 34 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 35 H 0.12 0.22 6.03 -51.92 -0.31 -0.10 16 36 H 0.08 -0.06 7.66 -51.93 -0.40 -0.46 16 37 H 0.40 -1.22 7.77 -40.82 -0.32 -1.54 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 40 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 41 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.38 -1.11 9.08 45.56 0.41 -0.70 16 43 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 44 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 46 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 47 H 0.16 -0.71 7.74 -52.49 -0.41 -1.12 16 48 H 0.21 -1.19 8.06 -52.49 -0.42 -1.61 16 49 H 0.13 0.21 8.06 -52.49 -0.42 -0.21 16 50 H 0.13 0.10 8.06 -52.49 -0.42 -0.32 16 LS Contribution 410.02 15.07 6.18 6.18 Total: 0.00 -9.84 410.02 -10.32 -20.17 By element: Atomic # 1 Polarization: -5.80 SS G_CDS: -6.29 Total: -12.08 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -3.91 Total: -2.45 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.28 Total: 0.08 kcal Atomic # 8 Polarization: -5.73 SS G_CDS: -0.96 Total: -6.69 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.06 Total: -5.20 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -9.84 -10.32 -20.17 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.058 kcal (2) G-P(sol) polarization free energy of solvation -9.844 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.902 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.324 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.168 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.226 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds