Wall clock time and date at job start Sat Mar 6 2021 15:02:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35993 * 117.00121 * 2 1 4 4 C 1.39156 * 120.07407 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07269 * 359.97438 * 4 3 2 6 6 C 1.42893 * 116.99827 * 179.73030 * 5 4 3 7 7 C 1.50703 * 109.46977 * 179.97438 * 6 5 4 8 8 O 1.21278 * 119.99866 * 359.97438 * 7 6 5 9 9 N 1.34781 * 120.00101 * 179.97438 * 7 6 5 10 10 C 1.46499 * 119.99874 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.47391 * 325.00213 * 10 9 7 12 12 C 1.53000 * 109.46840 * 85.00543 * 10 9 7 13 13 C 1.53001 * 109.46886 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.46963 * 299.99499 * 13 12 10 15 15 H 1.09002 * 109.47067 * 300.00341 * 14 13 12 16 16 O 1.42900 * 109.47442 * 180.02562 * 14 13 12 17 17 C 1.52997 * 109.47092 * 60.00194 * 14 13 12 18 18 C 1.53002 * 109.46799 * 205.00309 * 10 9 7 19 19 C 1.38570 * 119.85281 * 179.72615 * 4 3 2 20 20 C 1.38244 * 119.99790 * 0.26818 * 19 4 3 21 21 N 1.48011 * 119.92233 * 180.02562 * 20 19 4 22 22 O 1.21800 * 119.99962 * 0.02562 * 21 20 19 23 23 O 1.21796 * 119.99793 * 180.02562 * 21 20 19 24 24 C 1.38243 * 120.14774 * 359.97438 * 20 19 4 25 25 C 1.50708 * 119.92526 * 179.97438 * 24 20 19 26 26 O 1.42897 * 109.47024 * 75.00402 * 25 24 20 27 27 Si 1.86303 * 109.47045 * 194.99992 * 25 24 20 28 28 C 1.38238 * 120.14995 * 0.02562 * 24 20 19 29 29 H 1.09000 * 109.46871 * 299.99999 * 1 2 3 30 30 H 1.09002 * 109.46766 * 60.00019 * 1 2 3 31 31 H 1.09000 * 109.46982 * 180.02562 * 1 2 3 32 32 H 1.09002 * 109.47397 * 60.00148 * 6 5 4 33 33 H 1.09003 * 109.47076 * 299.99481 * 6 5 4 34 34 H 0.97002 * 119.99716 * 0.02562 * 9 7 6 35 35 H 1.09001 * 109.47194 * 299.99493 * 12 10 9 36 36 H 1.08992 * 109.47399 * 59.99666 * 12 10 9 37 37 H 1.09000 * 109.47437 * 180.02562 * 13 12 10 38 38 H 1.09002 * 109.47508 * 59.99571 * 13 12 10 39 39 H 0.96697 * 113.99983 * 59.99480 * 16 14 13 40 40 H 1.09001 * 109.47375 * 180.02562 * 17 14 13 41 41 H 1.09002 * 109.47497 * 59.99850 * 17 14 13 42 42 H 1.09002 * 109.47075 * 299.99543 * 18 10 9 43 43 H 1.08996 * 109.47407 * 60.00500 * 18 10 9 44 44 H 1.07992 * 119.99879 * 180.25240 * 19 4 3 45 45 H 1.08999 * 109.46909 * 314.99978 * 25 24 20 46 46 H 0.96694 * 114.00480 * 59.99479 * 26 25 24 47 47 H 1.48497 * 109.99709 * 180.02562 * 27 25 24 48 48 H 1.48500 * 109.99983 * 301.32213 * 27 25 24 49 49 H 1.07999 * 120.00407 * 180.02562 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1796 0.1476 -0.0005 6 6 5.6003 0.3006 -0.0071 7 6 6.2519 -1.0583 -0.0055 8 8 5.5670 -2.0591 0.0012 9 7 7.5957 -1.1613 -0.0114 10 6 8.2291 -2.4823 -0.0092 11 1 7.6299 -3.1716 0.5857 12 6 8.3295 -3.0020 -1.4447 13 6 8.9904 -4.3819 -1.4424 14 6 10.3926 -4.2748 -0.8395 15 1 10.9921 -3.5857 -1.4344 16 8 11.0102 -5.5635 -0.8379 17 6 10.2922 -3.7550 0.5959 18 6 9.6313 -2.3746 0.5935 19 6 4.0604 2.5234 -0.0063 20 6 3.3030 3.6798 -0.0059 21 7 3.9716 5.0003 -0.0126 22 8 5.1877 5.0671 -0.0189 23 8 3.3057 6.0201 -0.0117 24 6 1.9225 3.6057 -0.0002 25 6 1.1018 4.8697 0.0008 26 8 1.1295 5.4567 -1.3017 27 14 -0.6576 4.4673 0.4631 28 6 1.2933 2.3749 0.0055 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 5.9104 0.8529 0.8800 33 1 5.9027 0.8478 -0.9000 34 1 8.1435 -0.3608 -0.0163 35 1 7.3306 -3.0788 -1.8741 36 1 8.9287 -2.3128 -2.0396 37 1 9.0624 -4.7521 -2.4651 38 1 8.3909 -5.0710 -0.8476 39 1 11.1066 -5.9545 -1.7170 40 1 11.2911 -3.6783 1.0253 41 1 9.6926 -4.4441 1.1908 42 1 10.2305 -1.6853 -0.0015 43 1 9.5597 -2.0043 1.6162 44 1 5.1386 2.5840 -0.0108 45 1 1.5162 5.5714 0.7246 46 1 0.7749 4.8867 -1.9977 47 1 -1.4775 5.7054 0.4671 48 1 -1.2237 3.4868 -0.4979 49 1 0.2148 2.3197 0.0095 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:00 Heat of formation + Delta-G solvation = -155.148633 kcal Electronic energy + Delta-G solvation = -35996.158499 eV Core-core repulsion = 30894.637688 eV Total energy + Delta-G solvation = -5101.520811 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -43.38936 -42.13087 -41.28306 -40.08272 -39.39415 -39.18021 -37.74055 -37.25960 -36.99110 -34.62254 -32.70440 -32.57182 -31.89971 -30.64642 -29.00454 -28.42341 -27.91089 -25.82214 -24.09010 -23.89965 -23.34960 -23.01149 -21.70141 -21.03549 -20.78088 -19.84537 -19.54888 -18.78229 -18.66382 -18.50746 -18.21862 -17.76143 -17.68165 -17.52918 -17.08536 -16.89256 -16.49350 -16.25539 -16.19142 -15.74917 -15.55454 -15.46260 -15.08719 -14.84748 -14.75968 -14.49637 -14.22290 -13.91881 -13.78317 -13.48197 -13.37459 -13.28191 -13.08108 -13.01323 -12.70575 -12.52913 -12.48475 -12.45917 -12.37400 -12.24681 -12.20590 -12.11741 -11.78018 -11.70992 -11.32127 -11.09500 -10.79490 -10.65432 -10.49238 -10.21368 -9.50579 -5.00862 -1.35402 -0.44688 0.17150 0.31271 1.12796 1.22776 1.37848 1.45789 1.86237 1.87666 1.93091 2.31546 2.96976 3.14704 3.23651 3.26872 3.40818 3.46964 3.51392 3.58631 3.67581 3.86868 3.92832 3.94291 3.99503 4.04851 4.08595 4.09074 4.18971 4.24309 4.27390 4.30736 4.36555 4.37424 4.41177 4.59054 4.62023 4.70755 4.75584 4.85880 4.92427 4.99295 5.07067 5.09909 5.21537 5.26547 5.27570 5.39763 5.56894 6.03380 6.38760 6.42518 6.49275 6.84939 7.07267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.000 4.000 2 O -0.307 6.307 3 C 0.168 3.832 4 C 0.102 3.898 5 O -0.291 6.291 6 C 0.027 3.973 7 C 0.516 3.484 8 O -0.566 6.566 9 N -0.705 5.705 10 C 0.145 3.855 11 H 0.064 0.936 12 C -0.123 4.123 13 C -0.146 4.146 14 C 0.103 3.897 15 H 0.072 0.928 16 O -0.590 6.590 17 C -0.113 4.113 18 C -0.112 4.112 19 C -0.109 4.109 20 C -0.042 4.042 21 N 0.036 4.964 22 O -0.187 6.187 23 O -0.162 6.162 24 C -0.034 4.034 25 C -0.102 4.102 26 O -0.529 6.529 27 Si 0.774 3.226 28 C -0.172 4.172 29 H 0.089 0.911 30 H 0.074 0.926 31 H 0.122 0.878 32 H 0.130 0.870 33 H 0.128 0.872 34 H 0.422 0.578 35 H 0.049 0.951 36 H 0.086 0.914 37 H 0.078 0.922 38 H 0.055 0.945 39 H 0.394 0.606 40 H 0.079 0.921 41 H 0.057 0.943 42 H 0.095 0.905 43 H 0.086 0.914 44 H 0.184 0.816 45 H 0.129 0.871 46 H 0.383 0.617 47 H -0.295 1.295 48 H -0.250 1.250 49 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.411 -1.999 0.377 2.076 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 O -0.219 6.219 3 C 0.120 3.880 4 C 0.055 3.945 5 O -0.204 6.204 6 C -0.051 4.051 7 C 0.302 3.698 8 O -0.444 6.444 9 N -0.359 5.359 10 C 0.041 3.959 11 H 0.083 0.917 12 C -0.161 4.161 13 C -0.184 4.184 14 C 0.044 3.956 15 H 0.090 0.910 16 O -0.399 6.399 17 C -0.151 4.151 18 C -0.150 4.150 19 C -0.128 4.128 20 C -0.127 4.127 21 N 0.549 4.451 22 O -0.397 6.397 23 O -0.377 6.377 24 C -0.036 4.036 25 C -0.209 4.209 26 O -0.336 6.336 27 Si 0.675 3.325 28 C -0.191 4.191 29 H 0.108 0.892 30 H 0.093 0.907 31 H 0.140 0.860 32 H 0.148 0.852 33 H 0.145 0.855 34 H 0.260 0.740 35 H 0.068 0.932 36 H 0.104 0.896 37 H 0.096 0.904 38 H 0.074 0.926 39 H 0.243 0.757 40 H 0.098 0.902 41 H 0.076 0.924 42 H 0.114 0.886 43 H 0.105 0.895 44 H 0.202 0.798 45 H 0.146 0.854 46 H 0.232 0.768 47 H -0.222 1.222 48 H -0.175 1.175 49 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges -1.713 -3.141 1.100 3.743 hybrid contribution 0.659 0.773 -1.879 2.136 sum -1.055 -2.368 -0.778 2.707 Atomic orbital electron populations 1.23745 0.74966 1.06935 1.03746 1.86328 1.24554 1.24687 1.86305 1.18681 0.89225 0.86279 0.93837 1.17953 0.88705 0.85171 1.02715 1.86302 1.18530 1.26862 1.88712 1.22924 0.78747 0.96043 1.07349 1.20346 0.83142 0.90431 0.75914 1.90785 1.63953 1.39842 1.49831 1.45737 1.05143 1.10379 1.74648 1.21017 0.94330 0.83843 0.96712 0.91747 1.21809 1.00743 0.96940 0.96635 1.22192 0.96999 0.97250 1.01997 1.21920 0.91842 0.84659 0.97151 0.90992 1.86483 1.82680 1.34421 1.36274 1.21451 1.01881 0.96240 0.95572 1.21711 0.93175 0.97312 1.02828 1.20908 1.03036 0.88084 1.00797 1.20530 0.92660 0.81985 1.17488 1.43691 1.00820 1.03376 0.97209 1.94505 0.96491 1.94098 1.54637 1.94578 1.64449 1.25349 1.53313 1.20089 0.91020 0.97349 0.95162 1.25774 1.11667 0.93808 0.89623 1.86771 1.85284 1.45036 1.16493 0.94241 0.70205 0.79716 0.88305 1.21215 1.02207 0.88410 1.07240 0.89248 0.90705 0.85981 0.85212 0.85462 0.73963 0.93222 0.89564 0.90361 0.92640 0.75652 0.90238 0.92377 0.88610 0.89500 0.79840 0.85372 0.76808 1.22215 1.17515 0.79639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 9.81 113.37 1.11 1.12 16 2 O -0.31 -0.16 10.28 -79.60 -0.82 -0.98 16 3 C 0.17 -0.11 6.70 22.57 0.15 0.04 16 4 C 0.10 0.04 6.70 22.57 0.15 0.19 16 5 O -0.29 -0.91 9.45 -67.08 -0.63 -1.55 16 6 C 0.03 -0.13 5.22 71.24 0.37 0.24 16 7 C 0.52 0.57 7.87 87.66 0.69 1.26 16 8 O -0.57 -7.15 16.16 16.01 0.26 -6.89 16 9 N -0.71 3.90 5.08 -442.52 -2.25 1.66 16 10 C 0.15 -0.38 2.45 44.99 0.11 -0.27 16 11 H 0.06 0.24 7.58 -2.39 -0.02 0.22 16 12 C -0.12 0.26 5.49 30.59 0.17 0.43 16 13 C -0.15 0.26 5.55 30.60 0.17 0.43 16 14 C 0.10 -0.25 3.47 30.59 0.11 -0.14 16 15 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 16 O -0.59 -0.58 13.32 -148.98 -1.98 -2.56 16 17 C -0.11 0.29 5.58 30.61 0.17 0.47 16 18 C -0.11 0.78 5.40 30.61 0.17 0.94 16 19 C -0.11 0.13 8.54 22.35 0.19 0.32 16 20 C -0.04 -0.11 6.85 36.38 0.25 0.14 16 21 N 0.04 0.30 4.45 -46.46 -0.21 0.10 16 22 O -0.19 -1.81 18.44 18.89 0.35 -1.46 16 23 O -0.16 -1.90 14.62 25.11 0.37 -1.53 16 24 C -0.03 0.03 5.26 -19.86 -0.10 -0.07 16 25 C -0.10 0.03 1.74 71.24 0.12 0.16 16 26 O -0.53 -1.63 11.79 -129.61 -1.53 -3.16 16 27 Si 0.77 -4.39 30.24 68.60 2.07 -2.32 16 28 C -0.17 0.77 7.64 22.35 0.17 0.95 16 29 H 0.09 -1.15 7.65 -2.39 -0.02 -1.17 16 30 H 0.07 -0.82 7.67 -2.39 -0.02 -0.83 16 31 H 0.12 -1.24 8.14 -2.39 -0.02 -1.26 16 32 H 0.13 -1.42 7.66 -2.39 -0.02 -1.44 16 33 H 0.13 -1.36 7.66 -2.39 -0.02 -1.38 16 34 H 0.42 -5.57 8.60 -92.71 -0.80 -6.37 16 35 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 36 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 37 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 38 H 0.05 0.12 8.14 -2.39 -0.02 0.11 16 39 H 0.39 -2.62 9.08 -74.06 -0.67 -3.29 16 40 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 41 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 42 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 43 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 44 H 0.18 -1.08 5.85 -2.91 -0.02 -1.10 16 45 H 0.13 0.28 6.07 -2.39 -0.01 0.27 16 46 H 0.38 -1.72 8.70 -74.06 -0.64 -2.37 16 47 H -0.29 -0.83 7.11 99.48 0.71 -0.12 16 48 H -0.25 1.67 6.68 99.48 0.66 2.33 16 49 H 0.19 -1.84 3.09 -2.91 -0.01 -1.85 16 Total: 0.00 -32.36 402.95 -1.44 -33.80 By element: Atomic # 1 Polarization: -20.24 SS G_CDS: -1.07 Total: -21.31 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: 4.00 Total: 6.19 kcal Atomic # 7 Polarization: 4.21 SS G_CDS: -2.45 Total: 1.75 kcal Atomic # 8 Polarization: -14.13 SS G_CDS: -3.99 Total: -18.12 kcal Atomic # 14 Polarization: -4.39 SS G_CDS: 2.07 Total: -2.32 kcal Total: -32.36 -1.44 -33.80 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.350 kcal (2) G-P(sol) polarization free energy of solvation -32.357 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.706 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.442 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.149 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds