Wall clock time and date at job start Sat Mar 6 2021 15:02:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86309 * 109.46726 * 2 1 4 4 C 1.50703 * 109.47357 * 240.00173 * 2 1 3 5 5 C 1.38262 * 119.94221 * 299.99596 * 4 2 1 6 6 C 1.38141 * 120.05491 * 179.97438 * 5 4 2 7 7 C 1.38736 * 119.94173 * 0.02562 * 6 5 4 8 8 O 1.35904 * 120.05395 * 180.02562 * 7 6 5 9 9 C 1.42903 * 117.00029 * 179.97438 * 8 7 6 10 10 F 1.39898 * 109.47010 * 59.99633 * 9 8 7 11 11 F 1.39899 * 109.46599 * 299.99648 * 9 8 7 12 12 C 1.50701 * 109.47057 * 179.97438 * 9 8 7 13 13 O 1.21283 * 120.00052 * 359.97438 * 12 9 8 14 14 N 1.34770 * 119.99922 * 179.97438 * 12 9 8 15 15 C 1.46500 * 120.00256 * 180.02562 * 14 12 9 16 16 H 1.08998 * 109.46845 * 325.00694 * 15 14 12 17 17 C 1.53006 * 109.47249 * 84.99846 * 15 14 12 18 18 C 1.52997 * 109.47164 * 180.02562 * 17 15 14 19 19 C 1.53002 * 109.46978 * 299.99874 * 18 17 15 20 20 H 1.08992 * 109.47056 * 300.00064 * 19 18 17 21 21 O 1.42903 * 109.46797 * 180.02562 * 19 18 17 22 22 C 1.52996 * 109.46891 * 60.00410 * 19 18 17 23 23 C 1.52997 * 109.47473 * 205.00145 * 15 14 12 24 24 C 1.38728 * 119.89231 * 0.26840 * 7 6 5 25 25 C 1.38154 * 119.93940 * 359.47611 * 24 7 6 26 26 H 0.96700 * 114.00443 * 299.99942 * 1 2 3 27 27 H 1.09000 * 109.47031 * 119.99780 * 2 1 3 28 28 H 1.48499 * 110.00010 * 299.99867 * 3 2 1 29 29 H 1.48499 * 109.99668 * 61.31555 * 3 2 1 30 30 H 1.07994 * 119.97418 * 359.97438 * 5 4 2 31 31 H 1.08001 * 120.02859 * 180.02562 * 6 5 4 32 32 H 0.97005 * 120.00370 * 0.02562 * 14 12 9 33 33 H 1.09001 * 109.47002 * 60.00085 * 17 15 14 34 34 H 1.09000 * 109.47050 * 300.00351 * 17 15 14 35 35 H 1.09002 * 109.47045 * 180.02562 * 18 17 15 36 36 H 1.09001 * 109.47375 * 59.99966 * 18 17 15 37 37 H 0.96699 * 114.00345 * 60.00309 * 21 19 18 38 38 H 1.09004 * 109.47368 * 179.97438 * 22 19 18 39 39 H 1.09001 * 109.47372 * 59.99964 * 22 19 18 40 40 H 1.09002 * 109.47153 * 59.99757 * 23 15 14 41 41 H 1.09001 * 109.46832 * 299.99948 * 23 15 14 42 42 H 1.07997 * 120.03016 * 179.72727 * 24 7 6 43 43 H 1.07994 * 119.97004 * 180.27482 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5968 -2.0341 -1.4481 6 6 2.0556 -2.6874 -2.5755 7 6 2.8532 -2.0142 -3.4895 8 8 3.3054 -2.6545 -4.5997 9 6 4.1215 -1.8991 -5.4972 10 9 5.2663 -1.4562 -4.8260 11 9 3.4002 -0.7962 -5.9669 12 6 4.5260 -2.7677 -6.6603 13 8 4.1527 -3.9204 -6.7150 14 7 5.3026 -2.2637 -7.6397 15 6 5.6955 -3.1079 -8.7707 16 1 5.8445 -4.1311 -8.4257 17 6 4.5940 -3.0832 -9.8324 18 6 5.0040 -3.9654 -11.0133 19 6 6.3064 -3.4362 -11.6171 20 1 6.1575 -2.4132 -11.9624 21 8 6.6891 -4.2598 -12.7205 22 6 7.4078 -3.4610 -10.5555 23 6 6.9977 -2.5784 -9.3744 24 6 3.1926 -0.6878 -3.2658 25 6 2.7269 -0.0374 -2.1394 26 1 -0.3934 0.4417 0.7650 27 1 1.7923 -0.5138 0.8900 28 1 1.5614 2.4680 -1.2085 29 1 1.5877 2.4586 1.2242 30 1 0.9762 -2.5578 -0.7361 31 1 1.7936 -3.7213 -2.7453 32 1 5.6015 -1.3419 -7.5958 33 1 4.4448 -2.0600 -10.1774 34 1 3.6662 -3.4605 -9.4023 35 1 4.2195 -3.9474 -11.7699 36 1 5.1529 -4.9885 -10.6681 37 1 6.0362 -4.2910 -13.4331 38 1 8.3359 -3.0845 -10.9857 39 1 7.5567 -4.4842 -10.2102 40 1 7.7824 -2.5960 -8.6180 41 1 6.8485 -1.5552 -9.7193 42 1 3.8170 -0.1629 -3.9735 43 1 2.9871 0.9964 -1.9670 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_4549640.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:09 Heat of formation + Delta-G solvation = -223.752960 kcal Electronic energy + Delta-G solvation = -30496.349513 eV Core-core repulsion = 25758.182091 eV Total energy + Delta-G solvation = -4738.167422 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.131 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -50.90933 -48.87789 -41.58720 -41.28055 -39.80498 -39.18674 -37.47823 -37.15462 -34.83157 -32.53520 -32.12066 -31.92284 -30.33376 -28.37044 -26.25572 -24.62896 -23.95041 -23.44553 -22.53980 -22.15004 -21.27666 -20.55403 -19.79830 -19.70107 -18.56294 -18.22776 -18.09009 -17.63422 -17.14070 -16.85807 -16.50249 -16.40971 -15.97269 -15.73542 -15.57868 -15.51450 -15.46148 -15.37904 -15.12831 -14.92006 -14.79521 -14.45661 -14.36946 -14.26234 -14.03366 -13.72071 -13.42141 -13.30345 -13.14729 -13.11425 -12.60360 -12.55060 -12.22085 -12.13592 -11.88005 -11.83425 -11.61203 -11.34778 -10.81781 -10.54103 -10.49904 -10.19872 -9.58155 -4.94236 0.00120 0.14178 0.43747 0.60916 1.27912 1.58607 1.65329 1.93740 1.97290 2.41441 2.72480 3.20317 3.27801 3.31804 3.50420 3.54515 3.63309 3.65203 3.82661 3.94937 4.02591 4.07407 4.16704 4.18198 4.22583 4.30727 4.33176 4.40023 4.51025 4.52845 4.77281 4.81018 4.86849 4.89099 4.97616 5.02255 5.03099 5.06685 5.08911 5.20413 5.32783 5.34082 5.37158 5.79501 5.84197 6.44016 6.58359 6.86777 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.081 4.081 3 Si 0.758 3.242 4 C -0.104 4.104 5 C -0.059 4.059 6 C -0.136 4.136 7 C 0.085 3.915 8 O -0.305 6.305 9 C 0.434 3.566 10 F -0.168 7.168 11 F -0.172 7.172 12 C 0.517 3.483 13 O -0.508 6.508 14 N -0.681 5.681 15 C 0.142 3.858 16 H 0.080 0.920 17 C -0.126 4.126 18 C -0.145 4.145 19 C 0.102 3.898 20 H 0.072 0.928 21 O -0.589 6.589 22 C -0.112 4.112 23 C -0.114 4.114 24 C -0.192 4.192 25 C -0.079 4.079 26 H 0.396 0.604 27 H 0.102 0.898 28 H -0.299 1.299 29 H -0.283 1.283 30 H 0.151 0.849 31 H 0.146 0.854 32 H 0.425 0.575 33 H 0.088 0.912 34 H 0.054 0.946 35 H 0.080 0.920 36 H 0.060 0.940 37 H 0.394 0.606 38 H 0.081 0.919 39 H 0.062 0.938 40 H 0.090 0.910 41 H 0.097 0.903 42 H 0.144 0.856 43 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.451 4.403 -0.047 5.595 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.190 4.190 3 Si 0.663 3.337 4 C -0.105 4.105 5 C -0.077 4.077 6 C -0.155 4.155 7 C 0.042 3.958 8 O -0.222 6.222 9 C 0.357 3.643 10 F -0.150 7.150 11 F -0.153 7.153 12 C 0.295 3.705 13 O -0.381 6.381 14 N -0.334 5.334 15 C 0.039 3.961 16 H 0.098 0.902 17 C -0.165 4.165 18 C -0.183 4.183 19 C 0.043 3.957 20 H 0.090 0.910 21 O -0.398 6.398 22 C -0.150 4.150 23 C -0.152 4.152 24 C -0.211 4.211 25 C -0.097 4.097 26 H 0.247 0.753 27 H 0.120 0.880 28 H -0.227 1.227 29 H -0.210 1.210 30 H 0.169 0.831 31 H 0.164 0.836 32 H 0.263 0.737 33 H 0.106 0.894 34 H 0.073 0.927 35 H 0.099 0.901 36 H 0.079 0.921 37 H 0.244 0.756 38 H 0.100 0.900 39 H 0.081 0.919 40 H 0.109 0.891 41 H 0.115 0.885 42 H 0.162 0.838 43 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 3.583 3.842 -0.320 5.264 hybrid contribution -1.708 0.482 0.234 1.790 sum 1.875 4.324 -0.086 4.714 Atomic orbital electron populations 1.86540 1.18385 1.80695 1.51183 1.24944 0.84155 1.11653 0.98241 0.94243 0.90428 0.72348 0.76648 1.19565 0.99401 0.94690 0.96800 1.21061 0.96816 0.93881 0.95960 1.20707 0.99281 1.01731 0.93766 1.19222 0.97427 0.92469 0.86674 1.86644 1.64029 1.39303 1.32238 1.21780 0.76762 0.79430 0.86377 1.93197 1.50417 1.89803 1.81565 1.93195 1.78204 1.55428 1.88509 1.19409 0.81108 0.87133 0.82847 1.90859 1.53427 1.17317 1.76505 1.45840 1.49168 1.17423 1.20962 1.21349 0.95455 0.95033 0.84279 0.90164 1.21855 0.97759 1.01802 0.95079 1.22185 0.98365 0.99753 0.98000 1.21929 0.93273 0.93821 0.86674 0.91009 1.86484 1.49974 1.71596 1.31731 1.21433 0.98557 1.00760 0.94239 1.21744 0.95001 1.00850 0.97611 1.21586 1.04915 0.93319 1.01246 1.20977 0.96265 1.00106 0.92312 0.75300 0.88014 1.22652 1.21005 0.83138 0.83595 0.73689 0.89377 0.92688 0.90110 0.92141 0.75617 0.90017 0.91946 0.89136 0.88474 0.83819 0.82998 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.82 12.74 -148.98 -1.90 -2.72 16 2 C -0.08 0.10 2.81 71.24 0.20 0.30 16 3 Si 0.76 -1.89 29.78 68.60 2.04 0.16 16 4 C -0.10 -0.28 5.42 -19.85 -0.11 -0.39 16 5 C -0.06 -0.20 9.60 22.25 0.21 0.02 16 6 C -0.14 -0.75 9.99 22.37 0.22 -0.52 16 7 C 0.08 0.63 6.48 22.51 0.15 0.78 16 8 O -0.31 -2.85 9.60 -73.43 -0.71 -3.55 16 9 C 0.43 1.95 2.05 71.24 0.15 2.10 16 10 F -0.17 -0.36 15.27 44.97 0.69 0.33 16 11 F -0.17 -0.52 15.31 44.97 0.69 0.16 16 12 C 0.52 2.34 7.31 87.66 0.64 2.98 16 13 O -0.51 -6.16 16.16 16.00 0.26 -5.91 16 14 N -0.68 2.09 5.08 -442.53 -2.25 -0.16 16 15 C 0.14 -0.44 2.45 44.99 0.11 -0.33 16 16 H 0.08 0.11 7.58 -2.39 -0.02 0.09 16 17 C -0.13 0.37 5.49 30.60 0.17 0.54 16 18 C -0.14 0.46 5.54 30.59 0.17 0.62 16 19 C 0.10 -0.36 3.47 30.59 0.11 -0.25 16 20 H 0.07 -0.45 8.14 -2.39 -0.02 -0.47 16 21 O -0.59 0.04 13.32 -148.98 -1.98 -1.94 16 22 C -0.11 0.43 5.58 30.61 0.17 0.60 16 23 C -0.11 0.86 5.39 30.61 0.17 1.03 16 24 C -0.19 -0.88 8.26 22.37 0.18 -0.70 16 25 C -0.08 -0.18 8.66 22.26 0.19 0.01 16 26 H 0.40 -2.62 8.74 -74.06 -0.65 -3.26 16 27 H 0.10 -0.58 7.96 -2.39 -0.02 -0.60 16 28 H -0.30 -1.50 7.11 99.48 0.71 -0.79 16 29 H -0.28 -0.40 7.11 99.48 0.71 0.31 16 30 H 0.15 0.01 8.06 -2.91 -0.02 -0.01 16 31 H 0.15 0.48 8.06 -2.91 -0.02 0.46 16 32 H 0.42 -3.86 8.60 -92.70 -0.80 -4.65 16 33 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 34 H 0.05 0.09 8.14 -2.39 -0.02 0.07 16 35 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 36 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 37 H 0.39 -2.97 9.08 -74.06 -0.67 -3.65 16 38 H 0.08 -0.32 8.14 -2.39 -0.02 -0.33 16 39 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 40 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 41 H 0.10 -1.09 8.14 -2.39 -0.02 -1.11 16 42 H 0.14 0.31 5.10 -2.91 -0.01 0.29 16 43 H 0.15 -0.37 4.87 -2.91 -0.01 -0.38 16 Total: 0.00 -21.31 361.34 -1.42 -22.73 By element: Atomic # 1 Polarization: -14.90 SS G_CDS: -0.99 Total: -15.89 kcal Atomic # 6 Polarization: 4.07 SS G_CDS: 2.73 Total: 6.80 kcal Atomic # 7 Polarization: 2.09 SS G_CDS: -2.25 Total: -0.16 kcal Atomic # 8 Polarization: -9.80 SS G_CDS: -4.33 Total: -14.13 kcal Atomic # 9 Polarization: -0.88 SS G_CDS: 1.38 Total: 0.49 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: 2.04 Total: 0.16 kcal Total: -21.31 -1.42 -22.73 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4549640.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -201.019 kcal (2) G-P(sol) polarization free energy of solvation -21.314 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -222.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.734 kcal (6) G-S(sol) free energy of system = (1) + (5) -223.753 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds