Wall clock time and date at job start Sat Mar 6 2021 15:02:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.47304 * 2 1 4 4 C 1.50704 * 109.47430 * 119.99786 * 2 1 3 5 5 C 1.38244 * 119.97343 * 245.02714 * 4 2 1 6 6 C 1.38283 * 120.10878 * 179.97438 * 5 4 2 7 7 C 1.38122 * 120.05950 * 359.75571 * 6 5 4 8 8 C 1.38763 * 119.94192 * 0.51857 * 7 6 5 9 9 O 1.35897 * 120.05702 * 179.74053 * 8 7 6 10 10 C 1.42899 * 116.99793 * 359.72171 * 9 8 7 11 11 C 1.50702 * 109.46876 * 179.97438 * 10 9 8 12 12 O 1.21283 * 120.00262 * 0.02562 * 11 10 9 13 13 N 1.34777 * 119.99928 * 179.72354 * 11 10 9 14 14 C 1.46499 * 120.00199 * 180.27479 * 13 11 10 15 15 H 1.09001 * 109.46948 * 35.00281 * 14 13 11 16 16 C 1.52999 * 109.47481 * 154.99940 * 14 13 11 17 17 C 1.52995 * 109.47507 * 179.97438 * 16 14 13 18 18 C 1.52997 * 109.47319 * 300.00556 * 17 16 14 19 19 H 1.08993 * 109.47268 * 299.99783 * 18 17 16 20 20 O 1.42904 * 109.47337 * 179.97438 * 18 17 16 21 21 C 1.53005 * 109.47302 * 59.99629 * 18 17 16 22 22 C 1.52997 * 109.47288 * 275.00460 * 14 13 11 23 23 C 1.38168 * 119.96937 * 64.99826 * 4 2 1 24 24 H 0.96696 * 113.99733 * 60.00028 * 1 2 3 25 25 H 1.09003 * 109.47360 * 240.00319 * 2 1 3 26 26 H 1.48501 * 110.00193 * 59.99747 * 3 2 1 27 27 H 1.48497 * 110.00164 * 181.31949 * 3 2 1 28 28 H 1.08001 * 119.94576 * 359.97283 * 5 4 2 29 29 H 1.07998 * 119.96894 * 180.02562 * 6 5 4 30 30 H 1.07995 * 120.03299 * 180.28047 * 7 6 5 31 31 H 1.09004 * 109.47206 * 60.00256 * 10 9 8 32 32 H 1.08994 * 109.47548 * 299.99913 * 10 9 8 33 33 H 0.97000 * 120.00317 * 0.28382 * 13 11 10 34 34 H 1.09000 * 109.47556 * 300.00768 * 16 14 13 35 35 H 1.09007 * 109.46426 * 60.00536 * 16 14 13 36 36 H 1.09001 * 109.46891 * 60.00360 * 17 16 14 37 37 H 1.09000 * 109.47220 * 179.97438 * 17 16 14 38 38 H 0.96691 * 114.00083 * 180.02562 * 20 18 17 39 39 H 1.09001 * 109.47005 * 60.00136 * 21 18 17 40 40 H 1.09000 * 109.46851 * 179.97438 * 21 18 17 41 41 H 1.08993 * 109.47268 * 299.99834 * 22 14 13 42 42 H 1.09006 * 109.47495 * 60.00048 * 22 14 13 43 43 H 1.08001 * 120.02505 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9315 -0.7104 1.2305 5 6 2.6384 -0.0115 2.1912 6 6 3.1002 -0.6604 3.3216 7 6 2.8518 -2.0079 3.4959 8 6 2.1474 -2.7129 2.5304 9 8 1.9063 -4.0398 2.6970 10 6 2.4125 -4.6467 3.8876 11 6 2.0505 -6.1095 3.8988 12 8 1.4214 -6.5856 2.9777 13 7 2.4311 -6.8900 4.9295 14 6 2.0844 -8.3134 4.9376 15 1 2.1125 -8.6999 3.9188 16 6 3.0894 -9.0783 5.8011 17 6 2.7270 -10.5647 5.8100 18 6 1.3205 -10.7433 6.3851 19 1 1.2926 -10.3565 7.4037 20 8 0.9817 -12.1316 6.3929 21 6 0.3154 -9.9784 5.5215 22 6 0.6778 -8.4925 5.5123 23 6 1.6846 -2.0595 1.3978 24 1 -0.3933 0.4417 -0.7650 25 1 1.7924 -0.5138 -0.8900 26 1 1.5616 2.4680 1.2085 27 1 3.5347 1.7703 -0.0321 28 1 2.8303 1.0430 2.0586 29 1 3.6519 -0.1121 4.0709 30 1 3.2088 -2.5132 4.3811 31 1 1.9756 -4.1580 4.7585 32 1 3.4968 -4.5401 3.9170 33 1 2.9344 -6.5094 5.6662 34 1 4.0915 -8.9507 5.3917 35 1 3.0612 -8.6918 6.8199 36 1 2.7548 -10.9515 4.7913 37 1 3.4433 -11.1097 6.4248 38 1 0.1011 -12.3195 6.7451 39 1 0.3432 -10.3652 4.5028 40 1 -0.6866 -10.1060 5.9310 41 1 0.6496 -8.1060 6.5310 42 1 -0.0383 -7.9476 4.8970 43 1 1.1322 -2.6050 0.6469 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:19 Heat of formation + Delta-G solvation = -128.665634 kcal Electronic energy + Delta-G solvation = -24788.024743 eV Core-core repulsion = 20992.888567 eV Total energy + Delta-G solvation = -3795.136175 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.62601 -40.93155 -39.70810 -38.79932 -37.30835 -36.96020 -34.59230 -32.63087 -32.00391 -31.81841 -30.28621 -28.41766 -26.74994 -23.99830 -23.72417 -23.57216 -22.26424 -21.58144 -21.00320 -19.17115 -18.46952 -18.39999 -18.23789 -17.63707 -17.47043 -17.13609 -16.92414 -16.18109 -15.85885 -15.65718 -15.59546 -15.25101 -14.83357 -14.73912 -14.57425 -14.27898 -14.23418 -13.76903 -13.65543 -13.44880 -13.36132 -13.25311 -13.07086 -12.54732 -12.36733 -12.29261 -12.20539 -12.09643 -11.86009 -11.80279 -11.39944 -10.95474 -10.81571 -10.38191 -10.21300 -9.93028 -9.30149 -4.97731 0.16254 0.36076 1.23076 1.41881 1.45373 1.63570 1.96066 2.48502 2.60217 3.11311 3.36552 3.40772 3.51240 3.58154 3.70823 3.77538 3.84993 3.85757 3.89989 3.95147 4.01950 4.08021 4.16265 4.16802 4.21142 4.28478 4.31958 4.47453 4.52927 4.58080 4.72211 4.84355 4.90569 4.93190 4.98021 5.02242 5.13528 5.17784 5.21109 5.29393 5.34088 5.40677 5.59682 6.20046 6.34564 6.61975 6.64201 7.05650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.075 4.075 3 Si 0.689 3.311 4 C -0.035 4.035 5 C -0.160 4.160 6 C -0.071 4.071 7 C -0.206 4.206 8 C 0.131 3.869 9 O -0.287 6.287 10 C 0.040 3.960 11 C 0.517 3.483 12 O -0.510 6.510 13 N -0.725 5.725 14 C 0.145 3.855 15 H 0.093 0.907 16 C -0.123 4.123 17 C -0.110 4.110 18 C 0.103 3.897 19 H 0.056 0.944 20 O -0.568 6.568 21 C -0.150 4.150 22 C -0.128 4.128 23 C -0.117 4.117 24 H 0.383 0.617 25 H 0.077 0.923 26 H -0.250 1.250 27 H -0.254 1.254 28 H 0.121 0.879 29 H 0.131 0.869 30 H 0.132 0.868 31 H 0.095 0.905 32 H 0.095 0.905 33 H 0.402 0.598 34 H 0.078 0.922 35 H 0.072 0.928 36 H 0.075 0.925 37 H 0.077 0.923 38 H 0.380 0.620 39 H 0.075 0.925 40 H 0.070 0.930 41 H 0.067 0.933 42 H 0.073 0.927 43 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.979 2.669 2.518 4.169 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.035 4.035 5 C -0.178 4.178 6 C -0.089 4.089 7 C -0.225 4.225 8 C 0.086 3.914 9 O -0.199 6.199 10 C -0.039 4.039 11 C 0.301 3.699 12 O -0.383 6.383 13 N -0.378 5.378 14 C 0.041 3.959 15 H 0.111 0.889 16 C -0.161 4.161 17 C -0.148 4.148 18 C 0.044 3.956 19 H 0.074 0.926 20 O -0.374 6.374 21 C -0.188 4.188 22 C -0.167 4.167 23 C -0.136 4.136 24 H 0.231 0.769 25 H 0.095 0.905 26 H -0.175 1.175 27 H -0.179 1.179 28 H 0.138 0.862 29 H 0.149 0.851 30 H 0.149 0.851 31 H 0.112 0.888 32 H 0.113 0.887 33 H 0.236 0.764 34 H 0.097 0.903 35 H 0.091 0.909 36 H 0.093 0.907 37 H 0.096 0.904 38 H 0.227 0.773 39 H 0.094 0.906 40 H 0.088 0.912 41 H 0.085 0.915 42 H 0.092 0.908 43 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.587 2.419 2.415 4.287 hybrid contribution -0.149 -0.187 1.105 1.130 sum 2.438 2.233 3.520 4.829 Atomic orbital electron populations 1.86506 1.16947 1.81876 1.49693 1.24746 0.85965 1.10564 0.97247 0.95285 0.80686 0.77830 0.87229 1.19135 0.96740 0.92911 0.94701 1.20826 1.02384 0.99228 0.95360 1.20851 0.97606 0.93733 0.96751 1.21276 1.04911 0.95902 1.00382 1.19009 0.95247 0.82469 0.94713 1.86171 1.73762 1.19951 1.40053 1.22478 1.00676 0.91953 0.88789 1.20029 0.79880 0.87457 0.82531 1.90792 1.37885 1.74610 1.35016 1.45883 1.58487 1.09947 1.23519 1.21082 0.94179 0.79278 1.01389 0.88868 1.21767 0.99101 0.94880 1.00377 1.21403 0.95448 0.95180 1.02800 1.21846 0.94552 0.81399 0.97792 0.92594 1.86518 1.38956 1.24305 1.87583 1.22232 0.99449 0.95138 1.02025 1.21864 0.96751 0.96399 1.01668 1.20256 1.02418 0.93554 0.97357 0.76896 0.90495 1.17509 1.17935 0.86173 0.85095 0.85061 0.88754 0.88719 0.76372 0.90298 0.90912 0.90651 0.90401 0.77252 0.90628 0.91151 0.91455 0.90832 0.84424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.54 12.81 -35.23 -0.45 -0.99 16 2 C -0.07 -0.05 2.79 36.01 0.10 0.05 16 3 Si 0.69 -0.56 29.85 -169.99 -5.07 -5.63 16 4 C -0.03 -0.11 5.38 -104.64 -0.56 -0.67 16 5 C -0.16 -0.42 8.67 -39.56 -0.34 -0.76 16 6 C -0.07 -0.09 10.04 -39.61 -0.40 -0.49 16 7 C -0.21 -0.22 9.04 -39.43 -0.36 -0.58 16 8 C 0.13 0.42 6.69 -39.21 -0.26 0.16 16 9 O -0.29 -1.10 9.67 -39.33 -0.38 -1.48 16 10 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 11 C 0.52 0.84 7.87 -10.98 -0.09 0.76 16 12 O -0.51 -3.39 16.16 -14.35 -0.23 -3.62 16 13 N -0.72 1.21 5.08 -53.81 -0.27 0.93 16 14 C 0.14 -0.12 2.45 -67.93 -0.17 -0.28 16 15 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 16 C -0.12 0.31 5.39 -26.73 -0.14 0.17 16 17 C -0.11 0.11 5.57 -26.74 -0.15 -0.04 16 18 C 0.10 -0.08 3.47 -26.73 -0.09 -0.17 16 19 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 20 O -0.57 -0.39 13.32 -35.23 -0.47 -0.86 16 21 C -0.15 0.11 5.54 -26.76 -0.15 -0.03 16 22 C -0.13 0.08 5.49 -26.76 -0.15 -0.07 16 23 C -0.12 -0.45 9.62 -39.43 -0.38 -0.83 16 24 H 0.38 -1.63 8.74 45.56 0.40 -1.23 16 25 H 0.08 -0.07 7.96 -51.93 -0.41 -0.49 16 26 H -0.25 -0.55 7.05 56.52 0.40 -0.16 16 27 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 28 H 0.12 0.23 4.86 -52.49 -0.26 -0.03 16 29 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 30 H 0.13 -0.26 6.30 -52.49 -0.33 -0.59 16 31 H 0.09 -0.27 7.65 -51.93 -0.40 -0.67 16 32 H 0.09 -0.29 7.67 -51.93 -0.40 -0.68 16 33 H 0.40 -1.99 8.60 -40.82 -0.35 -2.35 16 34 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 36 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.38 -1.17 9.08 45.56 0.41 -0.76 16 39 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 40 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 43 H 0.14 0.52 8.06 -52.49 -0.42 0.10 16 LS Contribution 352.13 15.07 5.31 5.31 Total: 0.00 -11.05 352.13 -10.10 -21.15 By element: Atomic # 1 Polarization: -6.61 SS G_CDS: -5.58 Total: -12.19 kcal Atomic # 6 Polarization: 0.33 SS G_CDS: -2.95 Total: -2.62 kcal Atomic # 7 Polarization: 1.21 SS G_CDS: -0.27 Total: 0.93 kcal Atomic # 8 Polarization: -5.42 SS G_CDS: -1.53 Total: -6.95 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.07 Total: -5.63 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -11.05 -10.10 -21.15 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.511 kcal (2) G-P(sol) polarization free energy of solvation -11.054 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.566 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.100 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.154 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.666 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds