Wall clock time and date at job start Sat Mar 6 2021 15:02:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.47304 * 2 1 4 4 C 1.50704 * 109.47430 * 119.99786 * 2 1 3 5 5 C 1.38244 * 119.97343 * 245.02714 * 4 2 1 6 6 C 1.38283 * 120.10878 * 179.97438 * 5 4 2 7 7 C 1.38122 * 120.05950 * 359.75571 * 6 5 4 8 8 C 1.38763 * 119.94192 * 0.51857 * 7 6 5 9 9 O 1.35897 * 120.05702 * 179.74053 * 8 7 6 10 10 C 1.42899 * 116.99793 * 359.72171 * 9 8 7 11 11 C 1.50702 * 109.46876 * 179.97438 * 10 9 8 12 12 O 1.21283 * 120.00262 * 0.02562 * 11 10 9 13 13 N 1.34777 * 119.99928 * 179.72354 * 11 10 9 14 14 C 1.46499 * 120.00199 * 180.27479 * 13 11 10 15 15 H 1.09001 * 109.46948 * 35.00281 * 14 13 11 16 16 C 1.52999 * 109.47481 * 154.99940 * 14 13 11 17 17 C 1.52995 * 109.47507 * 179.97438 * 16 14 13 18 18 C 1.52997 * 109.47319 * 300.00556 * 17 16 14 19 19 H 1.08993 * 109.47268 * 299.99783 * 18 17 16 20 20 O 1.42904 * 109.47337 * 179.97438 * 18 17 16 21 21 C 1.53005 * 109.47302 * 59.99629 * 18 17 16 22 22 C 1.52997 * 109.47288 * 275.00460 * 14 13 11 23 23 C 1.38168 * 119.96937 * 64.99826 * 4 2 1 24 24 H 0.96696 * 113.99733 * 60.00028 * 1 2 3 25 25 H 1.09003 * 109.47360 * 240.00319 * 2 1 3 26 26 H 1.48501 * 110.00193 * 59.99747 * 3 2 1 27 27 H 1.48497 * 110.00164 * 181.31949 * 3 2 1 28 28 H 1.08001 * 119.94576 * 359.97283 * 5 4 2 29 29 H 1.07998 * 119.96894 * 180.02562 * 6 5 4 30 30 H 1.07995 * 120.03299 * 180.28047 * 7 6 5 31 31 H 1.09004 * 109.47206 * 60.00256 * 10 9 8 32 32 H 1.08994 * 109.47548 * 299.99913 * 10 9 8 33 33 H 0.97000 * 120.00317 * 0.28382 * 13 11 10 34 34 H 1.09000 * 109.47556 * 300.00768 * 16 14 13 35 35 H 1.09007 * 109.46426 * 60.00536 * 16 14 13 36 36 H 1.09001 * 109.46891 * 60.00360 * 17 16 14 37 37 H 1.09000 * 109.47220 * 179.97438 * 17 16 14 38 38 H 0.96691 * 114.00083 * 180.02562 * 20 18 17 39 39 H 1.09001 * 109.47005 * 60.00136 * 21 18 17 40 40 H 1.09000 * 109.46851 * 179.97438 * 21 18 17 41 41 H 1.08993 * 109.47268 * 299.99834 * 22 14 13 42 42 H 1.09006 * 109.47495 * 60.00048 * 22 14 13 43 43 H 1.08001 * 120.02505 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9315 -0.7104 1.2305 5 6 2.6384 -0.0115 2.1912 6 6 3.1002 -0.6604 3.3216 7 6 2.8518 -2.0079 3.4959 8 6 2.1474 -2.7129 2.5304 9 8 1.9063 -4.0398 2.6970 10 6 2.4125 -4.6467 3.8876 11 6 2.0505 -6.1095 3.8988 12 8 1.4214 -6.5856 2.9777 13 7 2.4311 -6.8900 4.9295 14 6 2.0844 -8.3134 4.9376 15 1 2.1125 -8.6999 3.9188 16 6 3.0894 -9.0783 5.8011 17 6 2.7270 -10.5647 5.8100 18 6 1.3205 -10.7433 6.3851 19 1 1.2926 -10.3565 7.4037 20 8 0.9817 -12.1316 6.3929 21 6 0.3154 -9.9784 5.5215 22 6 0.6778 -8.4925 5.5123 23 6 1.6846 -2.0595 1.3978 24 1 -0.3933 0.4417 -0.7650 25 1 1.7924 -0.5138 -0.8900 26 1 1.5616 2.4680 1.2085 27 1 3.5347 1.7703 -0.0321 28 1 2.8303 1.0430 2.0586 29 1 3.6519 -0.1121 4.0709 30 1 3.2088 -2.5132 4.3811 31 1 1.9756 -4.1580 4.7585 32 1 3.4968 -4.5401 3.9170 33 1 2.9344 -6.5094 5.6662 34 1 4.0915 -8.9507 5.3917 35 1 3.0612 -8.6918 6.8199 36 1 2.7548 -10.9515 4.7913 37 1 3.4433 -11.1097 6.4248 38 1 0.1011 -12.3195 6.7451 39 1 0.3432 -10.3652 4.5028 40 1 -0.6866 -10.1060 5.9310 41 1 0.6496 -8.1060 6.5310 42 1 -0.0383 -7.9476 4.8970 43 1 1.1322 -2.6050 0.6469 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:18 Heat of formation + Delta-G solvation = -133.405166 kcal Electronic energy + Delta-G solvation = -24788.230264 eV Core-core repulsion = 20992.888567 eV Total energy + Delta-G solvation = -3795.341697 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.72002 -40.99205 -39.73692 -38.89538 -37.34554 -37.00564 -34.64190 -32.71061 -31.94159 -31.88782 -30.32952 -28.39484 -26.80389 -23.93844 -23.84127 -23.55550 -22.32342 -21.62457 -20.97212 -19.23452 -18.50337 -18.41879 -18.21331 -17.73189 -17.50688 -17.21898 -16.98320 -16.16694 -15.89968 -15.74288 -15.54224 -15.29807 -14.91005 -14.77088 -14.64501 -14.36573 -14.23586 -13.85992 -13.70824 -13.40451 -13.30697 -13.28000 -13.03260 -12.52114 -12.45449 -12.28493 -12.22604 -12.17101 -11.86412 -11.79973 -11.33811 -11.08548 -10.81002 -10.40527 -10.23597 -10.02397 -9.44228 -4.93403 0.05465 0.21261 1.24280 1.36836 1.41364 1.65285 1.95516 2.46840 2.50408 3.22575 3.37890 3.46453 3.55545 3.65580 3.70901 3.79015 3.84866 3.94409 3.97541 3.99612 4.07170 4.13867 4.17125 4.17512 4.25362 4.35232 4.37526 4.39227 4.54883 4.60199 4.83280 4.84296 4.90379 4.97123 5.05062 5.06508 5.07992 5.17535 5.19728 5.25067 5.28191 5.38346 5.51871 6.15785 6.40204 6.83810 6.86734 7.06772 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.091 4.091 3 Si 0.788 3.212 4 C -0.052 4.052 5 C -0.180 4.180 6 C -0.071 4.071 7 C -0.201 4.201 8 C 0.120 3.880 9 O -0.319 6.319 10 C 0.036 3.964 11 C 0.513 3.487 12 O -0.572 6.572 13 N -0.704 5.704 14 C 0.144 3.856 15 H 0.061 0.939 16 C -0.111 4.111 17 C -0.114 4.114 18 C 0.104 3.896 19 H 0.074 0.926 20 O -0.590 6.590 21 C -0.146 4.146 22 C -0.123 4.123 23 C -0.146 4.146 24 H 0.404 0.596 25 H 0.089 0.911 26 H -0.292 1.292 27 H -0.285 1.285 28 H 0.123 0.877 29 H 0.160 0.840 30 H 0.168 0.832 31 H 0.126 0.874 32 H 0.128 0.872 33 H 0.423 0.577 34 H 0.086 0.914 35 H 0.097 0.903 36 H 0.056 0.944 37 H 0.081 0.919 38 H 0.394 0.606 39 H 0.053 0.947 40 H 0.078 0.922 41 H 0.087 0.913 42 H 0.046 0.954 43 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.166 3.529 4.617 6.618 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.200 4.200 3 Si 0.693 3.307 4 C -0.052 4.052 5 C -0.198 4.198 6 C -0.089 4.089 7 C -0.219 4.219 8 C 0.075 3.925 9 O -0.232 6.232 10 C -0.042 4.042 11 C 0.299 3.701 12 O -0.450 6.450 13 N -0.358 5.358 14 C 0.040 3.960 15 H 0.080 0.920 16 C -0.149 4.149 17 C -0.152 4.152 18 C 0.045 3.955 19 H 0.092 0.908 20 O -0.398 6.398 21 C -0.185 4.185 22 C -0.161 4.161 23 C -0.165 4.165 24 H 0.255 0.745 25 H 0.107 0.893 26 H -0.219 1.219 27 H -0.212 1.212 28 H 0.140 0.860 29 H 0.177 0.823 30 H 0.185 0.815 31 H 0.143 0.857 32 H 0.145 0.855 33 H 0.261 0.739 34 H 0.105 0.895 35 H 0.116 0.884 36 H 0.075 0.925 37 H 0.099 0.901 38 H 0.244 0.756 39 H 0.072 0.928 40 H 0.097 0.903 41 H 0.106 0.894 42 H 0.065 0.935 43 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 3.773 3.267 4.534 6.743 hybrid contribution -0.534 -0.516 0.501 0.895 sum 3.239 2.751 5.035 6.589 Atomic orbital electron populations 1.86452 1.17228 1.82558 1.51320 1.25060 0.85985 1.12049 0.96894 0.94205 0.77283 0.74540 0.84674 1.19493 0.96960 0.92896 0.95871 1.21054 1.03050 0.99547 0.96156 1.21256 0.96932 0.94060 0.96670 1.21624 1.03718 0.95802 1.00776 1.19176 0.95708 0.82483 0.95118 1.86129 1.74535 1.20396 1.42154 1.22777 1.02709 0.90196 0.88483 1.20533 0.78908 0.88546 0.82132 1.90771 1.40923 1.75854 1.37491 1.45712 1.57462 1.09356 1.23247 1.21021 0.94961 0.79845 1.00200 0.92039 1.21693 0.98579 0.93396 1.01228 1.21443 0.95663 0.96302 1.01761 1.21912 0.94282 0.80827 0.98467 0.90820 1.86482 1.40275 1.25164 1.87919 1.22189 1.00222 0.95078 1.00994 1.21800 0.96065 0.96134 1.02141 1.20352 1.03759 0.94232 0.98113 0.74502 0.89291 1.21927 1.21202 0.85993 0.82269 0.81474 0.85655 0.85461 0.73915 0.89516 0.88443 0.92513 0.90079 0.75630 0.92797 0.90304 0.89405 0.93472 0.85880 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.70 12.81 -148.98 -1.91 -3.61 16 2 C -0.09 -0.21 2.79 71.24 0.20 -0.01 16 3 Si 0.79 -1.02 29.85 68.60 2.05 1.02 16 4 C -0.05 -0.40 5.38 -19.88 -0.11 -0.50 16 5 C -0.18 -1.01 8.67 22.28 0.19 -0.82 16 6 C -0.07 -0.10 10.04 22.25 0.22 0.12 16 7 C -0.20 -0.16 9.04 22.37 0.20 0.04 16 8 C 0.12 0.86 6.69 22.51 0.15 1.01 16 9 O -0.32 -2.75 9.67 -73.35 -0.71 -3.46 16 10 C 0.04 -0.06 5.22 71.24 0.37 0.31 16 11 C 0.51 1.94 7.87 87.66 0.69 2.63 16 12 O -0.57 -9.14 16.16 16.00 0.26 -8.88 16 13 N -0.70 2.81 5.08 -442.54 -2.25 0.57 16 14 C 0.14 -0.17 2.45 44.99 0.11 -0.06 16 15 H 0.06 0.35 7.58 -2.39 -0.02 0.33 16 16 C -0.11 0.69 5.39 30.59 0.16 0.86 16 17 C -0.11 0.22 5.57 30.59 0.17 0.39 16 18 C 0.10 -0.18 3.47 30.59 0.11 -0.08 16 19 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 20 O -0.59 -0.91 13.32 -148.98 -1.98 -2.89 16 21 C -0.15 0.10 5.54 30.58 0.17 0.27 16 22 C -0.12 0.09 5.49 30.58 0.17 0.26 16 23 C -0.15 -1.43 9.62 22.36 0.22 -1.22 16 24 H 0.40 -3.27 8.74 -74.06 -0.65 -3.92 16 25 H 0.09 -0.08 7.96 -2.39 -0.02 -0.10 16 26 H -0.29 -1.57 7.05 99.48 0.70 -0.86 16 27 H -0.28 -1.00 7.11 99.48 0.71 -0.29 16 28 H 0.12 0.53 4.86 -2.91 -0.01 0.51 16 29 H 0.16 -0.77 8.06 -2.91 -0.02 -0.79 16 30 H 0.17 -1.24 6.30 -2.91 -0.02 -1.26 16 31 H 0.13 -1.03 7.65 -2.38 -0.02 -1.04 16 32 H 0.13 -1.09 7.67 -2.39 -0.02 -1.10 16 33 H 0.42 -5.22 8.60 -92.71 -0.80 -6.02 16 34 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 35 H 0.10 -1.02 8.14 -2.38 -0.02 -1.04 16 36 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 37 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 38 H 0.39 -2.41 9.08 -74.06 -0.67 -3.09 16 39 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 40 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 41 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 42 H 0.05 0.23 8.14 -2.38 -0.02 0.22 16 43 H 0.12 1.38 8.06 -2.91 -0.02 1.36 16 Total: 0.00 -30.28 352.13 -2.55 -32.83 By element: Atomic # 1 Polarization: -17.74 SS G_CDS: -1.04 Total: -18.78 kcal Atomic # 6 Polarization: 0.16 SS G_CDS: 3.03 Total: 3.19 kcal Atomic # 7 Polarization: 2.81 SS G_CDS: -2.25 Total: 0.57 kcal Atomic # 8 Polarization: -14.50 SS G_CDS: -4.34 Total: -18.84 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: 2.05 Total: 1.02 kcal Total: -30.28 -2.55 -32.83 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.572 kcal (2) G-P(sol) polarization free energy of solvation -30.281 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.853 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.553 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.833 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.405 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds