Wall clock time and date at job start Sat Mar 6 2021 15:02:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35987 * 116.99460 * 2 1 4 4 C 1.38682 * 119.99597 * 180.02562 * 3 2 1 5 5 C 1.38149 * 119.99955 * 179.97438 * 4 3 2 6 6 C 1.50701 * 120.00111 * 180.02562 * 5 4 3 7 7 O 1.42905 * 109.46960 * 104.97655 * 6 5 4 8 8 Si 1.86299 * 109.47032 * 344.97893 * 6 5 4 9 9 C 1.38678 * 119.99955 * 0.02562 * 5 4 3 10 10 O 1.35979 * 120.00042 * 180.02562 * 9 5 4 11 11 C 1.42898 * 117.00163 * 179.97438 * 10 9 5 12 12 C 1.50703 * 109.47171 * 179.97438 * 11 10 9 13 13 O 1.21278 * 119.99985 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00161 * 180.02562 * 12 11 10 15 15 C 1.46496 * 120.00271 * 180.02562 * 14 12 11 16 16 H 1.09005 * 109.47129 * 34.99449 * 15 14 12 17 17 C 1.52997 * 109.47387 * 154.99671 * 15 14 12 18 18 C 1.52997 * 109.47347 * 179.97438 * 17 15 14 19 19 C 1.53002 * 109.47086 * 300.00270 * 18 17 15 20 20 H 1.09005 * 109.46885 * 299.99681 * 19 18 17 21 21 O 1.42895 * 109.47043 * 180.02562 * 19 18 17 22 22 C 1.52997 * 109.47248 * 59.99669 * 19 18 17 23 23 C 1.52997 * 109.47347 * 300.00171 * 22 19 18 24 24 C 1.38716 * 120.00157 * 0.27063 * 9 5 4 25 25 C 1.38117 * 119.99724 * 359.45158 * 24 9 5 26 26 H 1.09003 * 109.46787 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.47071 * 299.99658 * 1 2 3 28 28 H 1.08998 * 109.47041 * 59.99561 * 1 2 3 29 29 H 1.07999 * 119.99929 * 0.02562 * 4 3 2 30 30 H 1.08993 * 109.47516 * 224.97981 * 6 5 4 31 31 H 0.96698 * 113.99725 * 60.00276 * 7 6 5 32 32 H 1.48496 * 109.99990 * 178.67685 * 8 6 5 33 33 H 1.48501 * 110.00060 * 300.00218 * 8 6 5 34 34 H 1.09002 * 109.47259 * 300.00122 * 11 10 9 35 35 H 1.09001 * 109.47074 * 60.00144 * 11 10 9 36 36 H 0.97005 * 119.99463 * 359.97438 * 14 12 11 37 37 H 1.08999 * 109.47176 * 299.99963 * 17 15 14 38 38 H 1.09005 * 109.47168 * 59.99802 * 17 15 14 39 39 H 1.09005 * 109.46998 * 59.99882 * 18 17 15 40 40 H 1.09005 * 109.47389 * 179.97438 * 18 17 15 41 41 H 0.96703 * 114.00234 * 180.02562 * 21 19 18 42 42 H 1.09005 * 109.47168 * 60.00185 * 22 19 18 43 43 H 1.08999 * 109.47176 * 180.02562 * 22 19 18 44 44 H 1.09005 * 109.46998 * 300.00118 * 23 22 19 45 45 H 1.08991 * 109.47366 * 180.02562 * 23 22 19 46 46 H 1.07993 * 120.00457 * 179.71093 * 24 9 5 47 47 H 1.08001 * 119.99767 * 180.26496 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0584 2.5153 -0.0011 6 6 5.5633 2.5942 -0.0022 7 8 6.0197 2.9668 -1.3042 8 14 6.2727 0.9326 0.4525 9 6 3.3030 3.6783 -0.0005 10 8 3.9203 4.8899 -0.0016 11 6 3.0804 6.0460 -0.0015 12 6 3.9345 7.2875 -0.0021 13 8 5.1435 7.1918 -0.0021 14 7 3.3549 8.5043 -0.0017 15 6 4.1852 9.7112 -0.0028 16 1 5.0841 9.5333 -0.5932 17 6 3.3966 10.8723 -0.6118 18 6 4.2636 12.1329 -0.6124 19 6 4.6573 12.4818 0.8243 20 1 3.7582 12.6595 1.4145 21 8 5.4665 13.6596 0.8238 22 6 5.4459 11.3208 1.4333 23 6 4.5790 10.0601 1.4339 24 6 1.9178 3.6057 0.0062 25 6 1.2908 2.3750 0.0009 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 4.0195 0.3786 -0.0014 30 1 5.8887 3.3391 0.7238 31 1 5.6888 3.8236 -1.6066 32 1 7.7563 0.9887 0.4238 33 1 5.8054 0.5337 1.8045 34 1 2.4504 6.0374 -0.8910 35 1 2.4518 6.0383 0.8890 36 1 2.3879 8.5808 -0.0013 37 1 3.1158 10.6235 -1.6352 38 1 2.4977 11.0502 -0.0214 39 1 5.1626 11.9553 -1.2026 40 1 3.7018 12.9600 -1.0467 41 1 5.7539 13.9398 1.7036 42 1 6.3450 11.1431 0.8431 43 1 5.7260 11.5691 2.4570 44 1 3.6799 10.2378 2.0241 45 1 5.1406 9.2331 1.8681 46 1 1.3296 4.5113 0.0114 47 1 0.2123 2.3185 0.0019 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:23 Heat of formation + Delta-G solvation = -167.428125 kcal Electronic energy + Delta-G solvation = -29471.305896 eV Core-core repulsion = 25200.269042 eV Total energy + Delta-G solvation = -4271.036854 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.86881 -41.19081 -40.16717 -39.45974 -38.03278 -37.04885 -36.80195 -34.62879 -32.79537 -32.02674 -31.30227 -30.25302 -28.60799 -28.00940 -26.49929 -24.10554 -24.00913 -23.06519 -22.39690 -21.67055 -21.07695 -19.54784 -18.82469 -18.63642 -18.28383 -17.90326 -17.57929 -17.37478 -17.32493 -16.71130 -16.33646 -16.01698 -15.68964 -15.65576 -15.59103 -15.34818 -15.12590 -14.78164 -14.48010 -14.27217 -14.14333 -13.97000 -13.63974 -13.47856 -13.47344 -13.38602 -13.14922 -13.07128 -12.70021 -12.53473 -12.31720 -12.25954 -11.89398 -11.87133 -11.53063 -11.42681 -11.16193 -11.02662 -10.94548 -10.84286 -10.25291 -10.08013 -8.83056 -4.74671 0.06644 0.33969 1.33958 1.40473 1.53339 1.78565 2.14195 2.24716 2.45420 2.55328 3.08813 3.34896 3.46735 3.53946 3.55154 3.63950 3.72233 3.79591 3.87129 3.95226 3.98810 4.05251 4.07397 4.10710 4.11603 4.13854 4.16690 4.25468 4.28789 4.33020 4.42821 4.49904 4.52726 4.64027 4.69457 4.81335 4.87566 4.95105 4.99391 5.01950 5.09674 5.10851 5.17650 5.17829 5.30448 5.39702 6.05185 6.25555 6.37539 6.62080 6.73916 7.00728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.103 3.897 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.099 3.901 10 O -0.290 6.290 11 C 0.041 3.959 12 C 0.516 3.484 13 O -0.510 6.510 14 N -0.725 5.725 15 C 0.145 3.855 16 H 0.093 0.907 17 C -0.123 4.123 18 C -0.110 4.110 19 C 0.103 3.897 20 H 0.056 0.944 21 O -0.568 6.568 22 C -0.150 4.150 23 C -0.128 4.128 24 C -0.165 4.165 25 C -0.165 4.165 26 H 0.103 0.897 27 H 0.055 0.945 28 H 0.056 0.944 29 H 0.147 0.853 30 H 0.078 0.922 31 H 0.368 0.632 32 H -0.254 1.254 33 H -0.251 1.251 34 H 0.095 0.905 35 H 0.093 0.907 36 H 0.402 0.598 37 H 0.079 0.921 38 H 0.072 0.928 39 H 0.075 0.925 40 H 0.078 0.922 41 H 0.380 0.620 42 H 0.075 0.925 43 H 0.070 0.930 44 H 0.067 0.933 45 H 0.072 0.928 46 H 0.133 0.867 47 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.411 1.407 0.823 8.567 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.100 4.100 6 C -0.180 4.180 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.054 3.946 10 O -0.203 6.203 11 C -0.038 4.038 12 C 0.301 3.699 13 O -0.383 6.383 14 N -0.378 5.378 15 C 0.041 3.959 16 H 0.112 0.888 17 C -0.161 4.161 18 C -0.148 4.148 19 C 0.044 3.956 20 H 0.074 0.926 21 O -0.373 6.373 22 C -0.189 4.189 23 C -0.166 4.166 24 C -0.184 4.184 25 C -0.184 4.184 26 H 0.121 0.879 27 H 0.074 0.926 28 H 0.075 0.925 29 H 0.164 0.836 30 H 0.096 0.904 31 H 0.216 0.784 32 H -0.179 1.179 33 H -0.175 1.175 34 H 0.113 0.887 35 H 0.111 0.889 36 H 0.236 0.764 37 H 0.097 0.903 38 H 0.091 0.909 39 H 0.094 0.906 40 H 0.096 0.904 41 H 0.228 0.772 42 H 0.094 0.906 43 H 0.088 0.912 44 H 0.085 0.915 45 H 0.091 0.909 46 H 0.151 0.849 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -6.520 0.114 0.773 6.567 hybrid contribution -1.494 2.068 1.053 2.760 sum -8.014 2.181 1.827 8.505 Atomic orbital electron populations 1.23104 0.78063 1.04402 1.01317 1.86119 1.21544 1.26165 1.88879 1.18813 0.91910 0.84577 0.98870 1.20060 0.91641 0.96774 1.03597 1.19484 0.96620 0.90033 1.03819 1.25371 0.91494 1.12370 0.88809 1.86708 1.73818 1.41938 1.31396 0.93017 0.79778 0.80258 0.82784 1.18658 0.90826 0.84584 1.00494 1.86112 1.33889 1.11075 1.89267 1.22457 0.93181 0.84148 1.04001 1.20032 0.88858 0.84194 0.76838 1.90794 1.14103 1.86498 1.46942 1.45887 1.10509 1.05070 1.76338 1.21085 0.94792 0.82991 0.97032 0.88845 1.21766 0.98698 0.93638 1.02020 1.21407 1.00629 0.97042 0.95766 1.21844 0.92536 0.84327 0.96877 0.92612 1.86520 1.71774 1.44417 1.34636 1.22240 0.99731 0.95020 1.01863 1.21870 1.00273 0.98017 0.96488 1.21017 0.92821 0.98691 1.05878 1.21083 1.00328 0.91507 1.05468 0.87858 0.92626 0.92536 0.83629 0.90429 0.78382 1.17890 1.17522 0.88747 0.88917 0.76388 0.90279 0.90924 0.90638 0.90383 0.77243 0.90615 0.91171 0.91476 0.90892 0.84924 0.84696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.39 10.50 -19.70 -0.21 -0.60 16 3 C 0.10 0.15 6.69 -39.24 -0.26 -0.11 16 4 C -0.10 -0.19 8.59 -39.45 -0.34 -0.53 16 5 C -0.10 -0.25 5.27 -104.49 -0.55 -0.80 16 6 C -0.07 -0.22 2.33 36.01 0.08 -0.14 16 7 O -0.53 -2.12 12.65 -35.23 -0.45 -2.57 16 8 Si 0.74 1.37 30.17 -169.99 -5.13 -3.76 16 9 C 0.10 0.17 6.62 -39.24 -0.26 -0.09 16 10 O -0.29 -0.59 8.56 -39.58 -0.34 -0.92 16 11 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 12 C 0.52 0.30 7.87 -10.98 -0.09 0.21 16 13 O -0.51 -2.79 16.16 -14.35 -0.23 -3.03 16 14 N -0.72 1.74 5.08 -53.81 -0.27 1.46 16 15 C 0.14 -0.19 2.45 -67.93 -0.17 -0.36 16 16 H 0.09 0.10 7.58 -51.93 -0.39 -0.30 16 17 C -0.12 0.37 5.39 -26.73 -0.14 0.22 16 18 C -0.11 0.14 5.57 -26.73 -0.15 -0.01 16 19 C 0.10 -0.11 3.47 -26.73 -0.09 -0.20 16 20 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 21 O -0.57 -0.28 13.32 -35.23 -0.47 -0.74 16 22 C -0.15 0.16 5.55 -26.73 -0.15 0.01 16 23 C -0.13 0.13 5.49 -26.73 -0.15 -0.01 16 24 C -0.17 0.05 9.03 -39.45 -0.36 -0.31 16 25 C -0.17 0.02 9.03 -39.45 -0.36 -0.34 16 26 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 27 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 28 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 29 H 0.15 0.04 5.13 -52.49 -0.27 -0.23 16 30 H 0.08 0.30 7.82 -51.93 -0.41 -0.10 16 31 H 0.37 0.96 8.60 45.56 0.39 1.35 16 32 H -0.25 -1.16 7.11 56.52 0.40 -0.76 16 33 H -0.25 -0.75 7.11 56.52 0.40 -0.34 16 34 H 0.09 -0.39 7.67 -51.93 -0.40 -0.79 16 35 H 0.09 -0.36 7.65 -51.93 -0.40 -0.76 16 36 H 0.40 -2.26 8.60 -40.82 -0.35 -2.61 16 37 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 38 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 39 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 41 H 0.38 -1.24 9.08 45.56 0.41 -0.83 16 42 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 43 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 44 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 45 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 46 H 0.13 -0.43 6.29 -52.49 -0.33 -0.76 16 47 H 0.14 -0.33 6.29 -52.49 -0.33 -0.66 16 LS Contribution 380.51 15.07 5.73 5.73 Total: 0.00 -9.84 380.51 -9.45 -19.29 By element: Atomic # 1 Polarization: -7.18 SS G_CDS: -6.29 Total: -13.47 kcal Atomic # 6 Polarization: 0.40 SS G_CDS: -1.80 Total: -1.40 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -0.27 Total: 1.46 kcal Atomic # 8 Polarization: -6.17 SS G_CDS: -1.69 Total: -7.86 kcal Atomic # 14 Polarization: 1.37 SS G_CDS: -5.13 Total: -3.76 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -9.84 -9.45 -19.29 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.137 kcal (2) G-P(sol) polarization free energy of solvation -9.844 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.981 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.447 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.292 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds