Wall clock time and date at job start Sat Mar 6 2021 15:02:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35987 * 116.99460 * 2 1 4 4 C 1.38682 * 119.99597 * 180.02562 * 3 2 1 5 5 C 1.38149 * 119.99955 * 179.97438 * 4 3 2 6 6 C 1.50701 * 120.00111 * 180.02562 * 5 4 3 7 7 O 1.42905 * 109.46960 * 104.97655 * 6 5 4 8 8 Si 1.86299 * 109.47032 * 344.97893 * 6 5 4 9 9 C 1.38678 * 119.99955 * 0.02562 * 5 4 3 10 10 O 1.35979 * 120.00042 * 180.02562 * 9 5 4 11 11 C 1.42898 * 117.00163 * 179.97438 * 10 9 5 12 12 C 1.50703 * 109.47171 * 179.97438 * 11 10 9 13 13 O 1.21278 * 119.99985 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00161 * 180.02562 * 12 11 10 15 15 C 1.46496 * 120.00271 * 180.02562 * 14 12 11 16 16 H 1.09005 * 109.47129 * 34.99449 * 15 14 12 17 17 C 1.52997 * 109.47387 * 154.99671 * 15 14 12 18 18 C 1.52997 * 109.47347 * 179.97438 * 17 15 14 19 19 C 1.53002 * 109.47086 * 300.00270 * 18 17 15 20 20 H 1.09005 * 109.46885 * 299.99681 * 19 18 17 21 21 O 1.42895 * 109.47043 * 180.02562 * 19 18 17 22 22 C 1.52997 * 109.47248 * 59.99669 * 19 18 17 23 23 C 1.52997 * 109.47347 * 300.00171 * 22 19 18 24 24 C 1.38716 * 120.00157 * 0.27063 * 9 5 4 25 25 C 1.38117 * 119.99724 * 359.45158 * 24 9 5 26 26 H 1.09003 * 109.46787 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.47071 * 299.99658 * 1 2 3 28 28 H 1.08998 * 109.47041 * 59.99561 * 1 2 3 29 29 H 1.07999 * 119.99929 * 0.02562 * 4 3 2 30 30 H 1.08993 * 109.47516 * 224.97981 * 6 5 4 31 31 H 0.96698 * 113.99725 * 60.00276 * 7 6 5 32 32 H 1.48496 * 109.99990 * 178.67685 * 8 6 5 33 33 H 1.48501 * 110.00060 * 300.00218 * 8 6 5 34 34 H 1.09002 * 109.47259 * 300.00122 * 11 10 9 35 35 H 1.09001 * 109.47074 * 60.00144 * 11 10 9 36 36 H 0.97005 * 119.99463 * 359.97438 * 14 12 11 37 37 H 1.08999 * 109.47176 * 299.99963 * 17 15 14 38 38 H 1.09005 * 109.47168 * 59.99802 * 17 15 14 39 39 H 1.09005 * 109.46998 * 59.99882 * 18 17 15 40 40 H 1.09005 * 109.47389 * 179.97438 * 18 17 15 41 41 H 0.96703 * 114.00234 * 180.02562 * 21 19 18 42 42 H 1.09005 * 109.47168 * 60.00185 * 22 19 18 43 43 H 1.08999 * 109.47176 * 180.02562 * 22 19 18 44 44 H 1.09005 * 109.46998 * 300.00118 * 23 22 19 45 45 H 1.08991 * 109.47366 * 180.02562 * 23 22 19 46 46 H 1.07993 * 120.00457 * 179.71093 * 24 9 5 47 47 H 1.08001 * 119.99767 * 180.26496 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0584 2.5153 -0.0011 6 6 5.5633 2.5942 -0.0022 7 8 6.0197 2.9668 -1.3042 8 14 6.2727 0.9326 0.4525 9 6 3.3030 3.6783 -0.0005 10 8 3.9203 4.8899 -0.0016 11 6 3.0804 6.0460 -0.0015 12 6 3.9345 7.2875 -0.0021 13 8 5.1435 7.1918 -0.0021 14 7 3.3549 8.5043 -0.0017 15 6 4.1852 9.7112 -0.0028 16 1 5.0841 9.5333 -0.5932 17 6 3.3966 10.8723 -0.6118 18 6 4.2636 12.1329 -0.6124 19 6 4.6573 12.4818 0.8243 20 1 3.7582 12.6595 1.4145 21 8 5.4665 13.6596 0.8238 22 6 5.4459 11.3208 1.4333 23 6 4.5790 10.0601 1.4339 24 6 1.9178 3.6057 0.0062 25 6 1.2908 2.3750 0.0009 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 4.0195 0.3786 -0.0014 30 1 5.8887 3.3391 0.7238 31 1 5.6888 3.8236 -1.6066 32 1 7.7563 0.9887 0.4238 33 1 5.8054 0.5337 1.8045 34 1 2.4504 6.0374 -0.8910 35 1 2.4518 6.0383 0.8890 36 1 2.3879 8.5808 -0.0013 37 1 3.1158 10.6235 -1.6352 38 1 2.4977 11.0502 -0.0214 39 1 5.1626 11.9553 -1.2026 40 1 3.7018 12.9600 -1.0467 41 1 5.7539 13.9398 1.7036 42 1 6.3450 11.1431 0.8431 43 1 5.7260 11.5691 2.4570 44 1 3.6799 10.2378 2.0241 45 1 5.1406 9.2331 1.8681 46 1 1.3296 4.5113 0.0114 47 1 0.2123 2.3185 0.0019 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:22 Heat of formation + Delta-G solvation = -171.315054 kcal Electronic energy + Delta-G solvation = -29471.474446 eV Core-core repulsion = 25200.269042 eV Total energy + Delta-G solvation = -4271.205404 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.86468 -41.17668 -40.12013 -39.46261 -38.14992 -37.08142 -36.87859 -34.62255 -32.82916 -31.92503 -31.25216 -30.21614 -28.50041 -27.88018 -26.60570 -24.08453 -23.91039 -23.00954 -22.41958 -21.65571 -20.99925 -19.55035 -18.82000 -18.60551 -18.23859 -18.06194 -17.52952 -17.38989 -17.28681 -16.62305 -16.29934 -16.05060 -15.69755 -15.61362 -15.54179 -15.45472 -15.14374 -14.77151 -14.53786 -14.22747 -14.18299 -14.09873 -13.54768 -13.45883 -13.40247 -13.30607 -13.08501 -13.00182 -12.56118 -12.46897 -12.31354 -12.22802 -12.04079 -11.79810 -11.45378 -11.34466 -11.31801 -11.25043 -11.02649 -10.81019 -10.21507 -10.10739 -8.83218 -4.94938 0.05473 0.32359 1.32025 1.40439 1.42252 1.56655 1.90155 2.34246 2.52617 2.55094 3.22955 3.46535 3.52581 3.56942 3.65660 3.72987 3.84042 3.92817 3.97577 4.03110 4.08270 4.08477 4.12305 4.17095 4.19872 4.25465 4.26851 4.35378 4.38989 4.44742 4.45177 4.59983 4.69551 4.79561 4.84325 4.90663 4.96289 4.96846 5.04877 5.07994 5.11387 5.19680 5.19936 5.25862 5.38504 5.41882 6.11790 6.39972 6.45517 6.49722 6.83119 7.09808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.119 4.119 5 C -0.119 4.119 6 C -0.082 4.082 7 O -0.545 6.545 8 Si 0.811 3.189 9 C 0.089 3.911 10 O -0.317 6.317 11 C 0.038 3.962 12 C 0.512 3.488 13 O -0.571 6.571 14 N -0.705 5.705 15 C 0.145 3.855 16 H 0.061 0.939 17 C -0.111 4.111 18 C -0.114 4.114 19 C 0.104 3.896 20 H 0.074 0.926 21 O -0.590 6.590 22 C -0.147 4.147 23 C -0.122 4.122 24 C -0.159 4.159 25 C -0.161 4.161 26 H 0.114 0.886 27 H 0.066 0.934 28 H 0.068 0.932 29 H 0.152 0.848 30 H 0.061 0.939 31 H 0.371 0.629 32 H -0.295 1.295 33 H -0.264 1.264 34 H 0.127 0.873 35 H 0.123 0.877 36 H 0.422 0.578 37 H 0.087 0.913 38 H 0.097 0.903 39 H 0.056 0.944 40 H 0.080 0.920 41 H 0.394 0.606 42 H 0.053 0.947 43 H 0.077 0.923 44 H 0.087 0.913 45 H 0.046 0.954 46 H 0.168 0.832 47 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.888 1.907 1.029 12.084 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.045 3.955 4 C -0.137 4.137 5 C -0.120 4.120 6 C -0.189 4.189 7 O -0.351 6.351 8 Si 0.712 3.288 9 C 0.044 3.956 10 O -0.231 6.231 11 C -0.040 4.040 12 C 0.298 3.702 13 O -0.449 6.449 14 N -0.359 5.359 15 C 0.041 3.959 16 H 0.079 0.921 17 C -0.149 4.149 18 C -0.152 4.152 19 C 0.045 3.955 20 H 0.092 0.908 21 O -0.399 6.399 22 C -0.185 4.185 23 C -0.161 4.161 24 C -0.177 4.177 25 C -0.180 4.180 26 H 0.132 0.868 27 H 0.085 0.915 28 H 0.086 0.914 29 H 0.169 0.831 30 H 0.078 0.922 31 H 0.220 0.780 32 H -0.222 1.222 33 H -0.189 1.189 34 H 0.145 0.855 35 H 0.141 0.859 36 H 0.260 0.740 37 H 0.105 0.895 38 H 0.115 0.885 39 H 0.075 0.925 40 H 0.099 0.901 41 H 0.244 0.756 42 H 0.072 0.928 43 H 0.096 0.904 44 H 0.106 0.894 45 H 0.065 0.935 46 H 0.185 0.815 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -10.072 0.646 0.981 10.140 hybrid contribution -0.427 1.976 1.006 2.258 sum -10.499 2.622 1.987 11.002 Atomic orbital electron populations 1.23359 0.76363 1.05621 1.02377 1.86091 1.23410 1.26301 1.88927 1.18979 0.91919 0.85382 0.99172 1.20180 0.92460 0.96759 1.04255 1.19450 0.95971 0.91048 1.05564 1.25521 0.92931 1.12504 0.87952 1.86661 1.74261 1.42237 1.31969 0.92220 0.76220 0.79021 0.81289 1.18800 0.91765 0.84215 1.00785 1.86084 1.35603 1.11967 1.89454 1.22723 0.92586 0.81800 1.06861 1.20568 0.88351 0.85550 0.75687 1.90776 1.16787 1.87365 1.49970 1.45718 1.11472 1.03942 1.74759 1.20993 0.94349 0.84032 0.96554 0.92053 1.21691 0.98696 0.91719 1.02788 1.21448 1.00238 0.97977 0.95532 1.21916 0.92804 0.83639 0.97138 0.90841 1.86485 1.72206 1.44956 1.36219 1.22196 0.99016 0.95360 1.01941 1.21803 1.00633 0.96925 0.96716 1.21375 0.92002 1.00055 1.04313 1.21426 1.01616 0.90903 1.04013 0.86752 0.91523 0.91390 0.83081 0.92162 0.78024 1.22220 1.18905 0.85534 0.85926 0.73978 0.89483 0.88464 0.92548 0.90119 0.75645 0.92843 0.90403 0.89440 0.93511 0.81457 0.82059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.66 10.50 -93.41 -0.98 -1.64 16 3 C 0.09 0.23 6.69 22.49 0.15 0.38 16 4 C -0.12 -0.52 8.59 22.35 0.19 -0.33 16 5 C -0.12 -0.73 5.27 -19.78 -0.10 -0.84 16 6 C -0.08 -0.70 2.33 71.24 0.17 -0.53 16 7 O -0.55 -5.65 12.65 -148.98 -1.89 -7.53 16 8 Si 0.81 4.55 30.17 68.60 2.07 6.62 16 9 C 0.09 0.30 6.62 22.49 0.15 0.45 16 10 O -0.32 -1.43 8.56 -74.28 -0.64 -2.07 16 11 C 0.04 -0.17 5.22 71.24 0.37 0.20 16 12 C 0.51 0.78 7.87 87.66 0.69 1.47 16 13 O -0.57 -7.73 16.16 16.01 0.26 -7.47 16 14 N -0.70 3.90 5.08 -442.54 -2.25 1.65 16 15 C 0.15 -0.32 2.45 44.99 0.11 -0.21 16 16 H 0.06 0.29 7.58 -2.38 -0.02 0.27 16 17 C -0.11 0.78 5.39 30.59 0.16 0.94 16 18 C -0.11 0.28 5.57 30.59 0.17 0.45 16 19 C 0.10 -0.23 3.47 30.59 0.11 -0.12 16 20 H 0.07 -0.40 8.14 -2.38 -0.02 -0.42 16 21 O -0.59 -0.76 13.32 -148.98 -1.98 -2.74 16 22 C -0.15 0.16 5.55 30.59 0.17 0.33 16 23 C -0.12 0.19 5.49 30.59 0.17 0.36 16 24 C -0.16 0.43 9.03 22.36 0.20 0.63 16 25 C -0.16 0.35 9.03 22.35 0.20 0.55 16 26 H 0.11 -0.99 8.14 -2.39 -0.02 -1.01 16 27 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 28 H 0.07 -0.57 7.66 -2.39 -0.02 -0.59 16 29 H 0.15 0.26 5.13 -2.91 -0.01 0.24 16 30 H 0.06 0.67 7.82 -2.39 -0.02 0.65 16 31 H 0.37 2.94 8.60 -74.06 -0.64 2.31 16 32 H -0.29 -3.53 7.11 99.48 0.71 -2.83 16 33 H -0.26 -1.95 7.11 99.48 0.71 -1.25 16 34 H 0.13 -1.42 7.67 -2.39 -0.02 -1.43 16 35 H 0.12 -1.31 7.65 -2.39 -0.02 -1.33 16 36 H 0.42 -5.80 8.60 -92.70 -0.80 -6.60 16 37 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 38 H 0.10 -1.09 8.14 -2.38 -0.02 -1.11 16 39 H 0.06 0.07 8.14 -2.38 -0.02 0.05 16 40 H 0.08 -0.22 8.14 -2.38 -0.02 -0.24 16 41 H 0.39 -2.49 9.08 -74.05 -0.67 -3.17 16 42 H 0.05 0.18 8.14 -2.38 -0.02 0.16 16 43 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 44 H 0.09 -0.48 8.14 -2.38 -0.02 -0.50 16 45 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 46 H 0.17 -1.76 6.29 -2.91 -0.02 -1.78 16 47 H 0.16 -1.30 6.29 -2.91 -0.02 -1.32 16 Total: 0.00 -27.27 380.51 -2.43 -29.70 By element: Atomic # 1 Polarization: -20.21 SS G_CDS: -1.05 Total: -21.26 kcal Atomic # 6 Polarization: 0.72 SS G_CDS: 4.02 Total: 4.74 kcal Atomic # 7 Polarization: 3.90 SS G_CDS: -2.25 Total: 1.65 kcal Atomic # 8 Polarization: -16.22 SS G_CDS: -5.23 Total: -21.45 kcal Atomic # 14 Polarization: 4.55 SS G_CDS: 2.07 Total: 6.62 kcal Total: -27.27 -2.43 -29.70 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.616 kcal (2) G-P(sol) polarization free energy of solvation -27.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.882 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.433 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.699 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.315 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds