Wall clock time and date at job start Sat Mar 6 2021 15:02:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35898 * 116.99691 * 2 1 4 4 C 1.38614 * 120.02094 * 180.27682 * 3 2 1 5 5 C 1.38664 * 119.88613 * 180.20809 * 4 3 2 6 6 O 1.35902 * 120.02687 * 179.79126 * 5 4 3 7 7 C 1.42903 * 116.99491 * 359.72105 * 6 5 4 8 8 C 1.50706 * 109.46628 * 180.02562 * 7 6 5 9 9 O 1.21280 * 120.00268 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00082 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00336 * 180.02562 * 10 8 7 12 12 H 1.09000 * 109.46684 * 324.99535 * 11 10 8 13 13 C 1.53002 * 109.47428 * 84.99288 * 11 10 8 14 14 C 1.52996 * 109.46972 * 180.02562 * 13 11 10 15 15 C 1.52997 * 109.47165 * 300.00293 * 14 13 11 16 16 H 1.09000 * 109.47140 * 299.99954 * 15 14 13 17 17 O 1.42905 * 109.47266 * 180.02562 * 15 14 13 18 18 C 1.52999 * 109.47592 * 60.00300 * 15 14 13 19 19 C 1.52997 * 109.47079 * 204.99808 * 11 10 8 20 20 C 1.38743 * 119.94574 * 359.51204 * 5 4 3 21 21 C 1.50700 * 119.97460 * 180.23301 * 20 5 4 22 22 O 1.42903 * 109.47325 * 285.00022 * 21 20 5 23 23 Si 1.86302 * 109.47338 * 164.99831 * 21 20 5 24 24 C 1.38199 * 120.05556 * 0.25682 * 20 5 4 25 25 C 1.38153 * 120.11092 * 359.97438 * 24 20 5 26 26 H 1.09005 * 109.47117 * 60.00268 * 1 2 3 27 27 H 1.08990 * 109.47284 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47166 * 300.00752 * 1 2 3 29 29 H 1.08000 * 120.06194 * 359.97217 * 4 3 2 30 30 H 1.08990 * 109.47309 * 60.00295 * 7 6 5 31 31 H 1.08999 * 109.47533 * 299.99615 * 7 6 5 32 32 H 0.97005 * 119.99682 * 359.97438 * 10 8 7 33 33 H 1.08992 * 109.46974 * 300.00496 * 13 11 10 34 34 H 1.08996 * 109.46550 * 60.00602 * 13 11 10 35 35 H 1.09000 * 109.47054 * 60.00300 * 14 13 11 36 36 H 1.09001 * 109.46997 * 180.02562 * 14 13 11 37 37 H 0.96705 * 113.99792 * 59.99753 * 17 15 14 38 38 H 1.08993 * 109.47839 * 180.02562 * 18 15 14 39 39 H 1.09000 * 109.47160 * 59.99666 * 18 15 14 40 40 H 1.09001 * 109.46922 * 59.99748 * 19 11 10 41 41 H 1.09000 * 109.47140 * 299.99448 * 19 11 10 42 42 H 1.08999 * 109.47157 * 45.00093 * 21 20 5 43 43 H 0.96700 * 113.99606 * 299.99923 * 22 21 20 44 44 H 1.48504 * 109.99834 * 58.68249 * 23 21 20 45 45 H 1.48501 * 110.00002 * 179.97438 * 23 21 20 46 46 H 1.08005 * 119.94583 * 180.02562 * 24 20 5 47 47 H 1.08002 * 119.97568 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2840 -0.0058 5 6 4.0567 2.5210 -0.0014 6 8 5.4136 2.5960 -0.0028 7 6 6.1316 1.3604 -0.0026 8 6 7.6125 1.6401 -0.0037 9 8 8.0135 2.7846 -0.0049 10 7 8.4912 0.6182 -0.0042 11 6 9.9308 0.8899 -0.0046 12 1 10.1314 1.7846 -0.5940 13 6 10.4091 1.1079 1.4323 14 6 11.9124 1.3923 1.4316 15 6 12.6563 0.2028 0.8213 16 1 12.4561 -0.6921 1.4106 17 8 14.0605 0.4682 0.8213 18 6 12.1780 -0.0151 -0.6156 19 6 10.6742 -0.3000 -0.6148 20 6 3.2972 3.6821 -0.0015 21 6 3.9775 5.0268 -0.0020 22 8 4.5041 5.2948 1.2991 23 14 2.7438 6.3468 -0.4566 24 6 1.9173 3.6065 -0.0005 25 6 1.2906 2.3753 -0.0001 26 1 -0.3634 0.5138 -0.8901 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8899 29 1 4.0197 0.3791 -0.0099 30 1 5.8691 0.7876 -0.8919 31 1 5.8708 0.7887 0.8880 32 1 8.1705 -0.2973 -0.0036 33 1 9.8795 1.9555 1.8668 34 1 10.2085 0.2131 2.0215 35 1 12.1126 2.2872 0.8424 36 1 12.2533 1.5471 2.4553 37 1 14.4328 0.6164 1.7014 38 1 12.7076 -0.8628 -1.0503 39 1 12.3783 0.8797 -1.2048 40 1 10.3334 -0.4551 -1.6384 41 1 10.4736 -1.1947 -0.0254 42 1 4.7896 5.0228 -0.7289 43 1 3.8357 5.3135 1.9977 44 1 1.6153 6.3414 0.5087 45 1 3.4022 7.6778 -0.4601 46 1 1.3277 4.5115 -0.0010 47 1 0.2120 2.3188 0.0002 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:25 Heat of formation + Delta-G solvation = -167.432411 kcal Electronic energy + Delta-G solvation = -29530.793719 eV Core-core repulsion = 25259.756679 eV Total energy + Delta-G solvation = -4271.037040 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -41.87058 -41.17433 -40.11478 -39.47526 -38.37800 -37.10374 -36.92732 -34.61688 -32.32089 -31.91668 -31.54930 -30.33638 -28.53617 -28.23148 -26.14160 -24.07054 -23.90119 -22.99089 -22.50038 -21.65641 -20.99573 -19.97382 -18.69561 -18.26398 -18.14598 -17.87537 -17.54528 -17.38842 -16.98073 -16.67813 -16.50420 -16.27850 -16.02658 -15.63691 -15.54740 -15.36572 -15.18218 -14.75185 -14.73400 -14.50777 -14.22479 -13.76835 -13.50205 -13.40051 -13.34557 -13.29749 -13.16577 -13.01046 -12.53508 -12.45272 -12.30916 -12.22332 -12.03998 -11.79441 -11.66566 -11.63498 -11.33017 -11.05426 -10.80371 -10.52473 -10.21406 -9.71134 -9.11424 -4.93658 0.19142 0.29801 1.30915 1.39903 1.41629 1.54918 1.95692 2.24045 2.53775 2.56507 3.23545 3.48481 3.50248 3.57818 3.66366 3.71424 3.79366 3.92999 3.98240 4.00963 4.05812 4.08098 4.16228 4.17839 4.25915 4.33724 4.35525 4.39483 4.40275 4.42369 4.46158 4.60781 4.65174 4.78951 4.84920 4.91212 4.97492 5.01399 5.05600 5.08607 5.20463 5.22641 5.26236 5.27132 5.39669 5.46725 6.12108 6.34992 6.43129 6.56303 6.84026 7.09579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.329 6.329 3 C 0.165 3.835 4 C -0.252 4.252 5 C 0.177 3.823 6 O -0.304 6.304 7 C 0.035 3.965 8 C 0.513 3.487 9 O -0.568 6.568 10 N -0.705 5.705 11 C 0.145 3.855 12 H 0.061 0.939 13 C -0.123 4.123 14 C -0.146 4.146 15 C 0.104 3.896 16 H 0.074 0.926 17 O -0.590 6.590 18 C -0.113 4.113 19 C -0.111 4.111 20 C -0.196 4.196 21 C -0.078 4.078 22 O -0.550 6.550 23 Si 0.782 3.218 24 C -0.041 4.041 25 C -0.237 4.237 26 H 0.070 0.930 27 H 0.116 0.884 28 H 0.066 0.934 29 H 0.154 0.846 30 H 0.125 0.875 31 H 0.120 0.880 32 H 0.422 0.578 33 H 0.045 0.955 34 H 0.087 0.913 35 H 0.053 0.947 36 H 0.078 0.922 37 H 0.394 0.606 38 H 0.081 0.919 39 H 0.056 0.944 40 H 0.087 0.913 41 H 0.097 0.903 42 H 0.096 0.904 43 H 0.381 0.619 44 H -0.261 1.261 45 H -0.309 1.309 46 H 0.156 0.844 47 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.990 -8.170 -0.421 10.139 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.271 4.271 5 C 0.130 3.870 6 O -0.216 6.216 7 C -0.043 4.043 8 C 0.299 3.701 9 O -0.446 6.446 10 N -0.359 5.359 11 C 0.040 3.960 12 H 0.080 0.920 13 C -0.161 4.161 14 C -0.185 4.185 15 C 0.045 3.955 16 H 0.092 0.908 17 O -0.398 6.398 18 C -0.151 4.151 19 C -0.149 4.149 20 C -0.197 4.197 21 C -0.186 4.186 22 O -0.358 6.358 23 Si 0.685 3.315 24 C -0.059 4.059 25 C -0.256 4.256 26 H 0.089 0.911 27 H 0.135 0.865 28 H 0.085 0.915 29 H 0.172 0.828 30 H 0.143 0.857 31 H 0.137 0.863 32 H 0.260 0.740 33 H 0.064 0.936 34 H 0.105 0.895 35 H 0.072 0.928 36 H 0.096 0.904 37 H 0.244 0.756 38 H 0.100 0.900 39 H 0.075 0.925 40 H 0.105 0.895 41 H 0.115 0.885 42 H 0.114 0.886 43 H 0.230 0.770 44 H -0.187 1.187 45 H -0.237 1.237 46 H 0.173 0.827 47 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -5.431 -6.741 -1.149 8.732 hybrid contribution 0.206 -0.247 1.888 1.915 sum -5.224 -6.988 0.739 8.756 Atomic orbital electron populations 1.23403 0.76001 1.05710 1.02687 1.86056 1.23751 1.26544 1.87918 1.18871 0.91650 0.84981 0.92654 1.20558 0.93415 0.97400 1.15697 1.18589 0.81696 0.93197 0.93487 1.86226 1.15558 1.31696 1.88124 1.22742 0.88368 0.86473 1.06672 1.20506 0.88577 0.85239 0.75766 1.90781 1.80735 1.23308 1.49800 1.45722 1.05749 1.09632 1.74824 1.21012 0.78909 0.99416 0.96614 0.92028 1.21806 0.95295 1.02341 0.96691 1.22193 0.95087 0.99192 1.01979 1.21910 0.80157 0.96273 0.97128 0.90836 1.86485 1.22913 1.94218 1.36190 1.21452 0.95335 1.02790 0.95549 1.21706 0.93214 0.97215 1.02767 1.19605 0.93536 0.93940 1.12633 1.25167 1.06270 0.99829 0.87315 1.86653 1.38566 1.93071 1.17466 0.94108 0.75473 0.73305 0.88572 1.20947 0.91981 0.98838 0.94096 1.21400 1.01623 0.91224 1.11344 0.91099 0.86542 0.91496 0.82845 0.85714 0.86253 0.74036 0.93621 0.89466 0.92803 0.90354 0.75637 0.90034 0.92480 0.89475 0.88484 0.88564 0.77024 1.18730 1.23722 0.82702 0.82494 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.14 10.49 -92.40 -0.97 -1.11 16 3 C 0.16 0.24 6.68 22.49 0.15 0.39 16 4 C -0.25 -0.51 8.97 22.46 0.20 -0.31 16 5 C 0.18 1.00 6.66 22.49 0.15 1.15 16 6 O -0.30 -2.65 8.99 -73.41 -0.66 -3.31 16 7 C 0.04 0.00 5.22 71.24 0.37 0.37 16 8 C 0.51 2.62 7.87 87.66 0.69 3.31 16 9 O -0.57 -9.78 16.16 16.01 0.26 -9.52 16 10 N -0.71 1.87 5.08 -442.54 -2.25 -0.38 16 11 C 0.14 -0.02 2.45 44.99 0.11 0.09 16 12 H 0.06 0.41 7.58 -2.39 -0.02 0.39 16 13 C -0.12 -0.05 5.49 30.59 0.17 0.12 16 14 C -0.15 -0.03 5.54 30.59 0.17 0.14 16 15 C 0.10 -0.11 3.47 30.59 0.11 -0.01 16 16 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 17 O -0.59 -1.23 13.32 -148.98 -1.98 -3.21 16 18 C -0.11 0.15 5.58 30.61 0.17 0.32 16 19 C -0.11 0.60 5.39 30.61 0.17 0.76 16 20 C -0.20 -0.89 5.27 -19.75 -0.10 -0.99 16 21 C -0.08 -0.51 2.37 71.24 0.17 -0.34 16 22 O -0.55 -5.75 12.88 -148.98 -1.92 -7.66 16 23 Si 0.78 0.75 30.24 68.60 2.07 2.82 16 24 C -0.04 0.00 8.65 22.24 0.19 0.20 16 25 C -0.24 0.26 9.04 22.38 0.20 0.46 16 26 H 0.07 -0.62 7.66 -2.38 -0.02 -0.64 16 27 H 0.12 -1.12 8.14 -2.39 -0.02 -1.14 16 28 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 29 H 0.15 -0.39 6.30 -2.91 -0.02 -0.41 16 30 H 0.13 -0.81 7.65 -2.39 -0.02 -0.82 16 31 H 0.12 -0.66 7.67 -2.39 -0.02 -0.68 16 32 H 0.42 -4.53 8.60 -92.70 -0.80 -5.33 16 33 H 0.04 0.29 8.14 -2.39 -0.02 0.27 16 34 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 35 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 36 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 37 H 0.39 -2.20 9.08 -74.05 -0.67 -2.88 16 38 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 39 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 40 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 41 H 0.10 -0.93 8.14 -2.39 -0.02 -0.95 16 42 H 0.10 0.94 7.82 -2.39 -0.02 0.92 16 43 H 0.38 1.08 8.70 -74.06 -0.64 0.43 16 44 H -0.26 -0.27 6.68 99.48 0.66 0.39 16 45 H -0.31 -2.93 7.11 99.48 0.71 -2.22 16 46 H 0.16 -0.66 4.85 -2.91 -0.01 -0.68 16 47 H 0.16 -0.99 6.29 -2.91 -0.02 -1.01 16 Total: 0.00 -29.33 380.73 -2.52 -31.85 By element: Atomic # 1 Polarization: -15.06 SS G_CDS: -1.10 Total: -16.16 kcal Atomic # 6 Polarization: 2.64 SS G_CDS: 4.03 Total: 6.67 kcal Atomic # 7 Polarization: 1.87 SS G_CDS: -2.25 Total: -0.38 kcal Atomic # 8 Polarization: -19.53 SS G_CDS: -5.27 Total: -24.81 kcal Atomic # 14 Polarization: 0.75 SS G_CDS: 2.07 Total: 2.82 kcal Total: -29.33 -2.52 -31.85 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.585 kcal (2) G-P(sol) polarization free energy of solvation -29.329 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.519 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.847 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.432 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds