Wall clock time and date at job start Sat Mar 6 2021 15:02:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37635 * 125.67031 * 2 1 4 4 C 1.46670 * 126.22940 * 0.02562 * 3 2 1 5 5 O 1.21700 * 120.00020 * 354.33238 * 4 3 2 6 6 N 1.34783 * 120.00186 * 174.32745 * 4 3 2 7 7 C 1.46502 * 119.99957 * 185.15471 * 6 4 3 8 8 H 1.09000 * 109.47128 * 324.99917 * 7 6 4 9 9 C 1.52998 * 109.47215 * 84.99945 * 7 6 4 10 10 C 1.53000 * 109.47350 * 179.97438 * 9 7 6 11 11 C 1.52999 * 109.46914 * 300.00211 * 10 9 7 12 12 H 1.09007 * 109.47443 * 299.99748 * 11 10 9 13 13 O 1.42898 * 109.46913 * 180.02562 * 11 10 9 14 14 C 1.52998 * 109.47284 * 59.99749 * 11 10 9 15 15 C 1.52999 * 109.46933 * 205.00084 * 7 6 4 16 16 C 1.37882 * 107.54942 * 180.02562 * 3 2 1 17 17 C 1.39879 * 107.08979 * 0.02562 * 16 3 2 18 18 Br 1.89104 * 126.07280 * 179.73207 * 17 16 3 19 19 C 1.35499 * 107.85253 * 0.02562 * 17 16 3 20 20 C 1.50707 * 125.57154 * 179.97438 * 19 17 16 21 21 O 1.42899 * 109.46937 * 294.40004 * 20 19 17 22 22 Si 1.86300 * 109.47291 * 54.39942 * 20 19 17 23 23 H 1.08998 * 109.47659 * 94.15741 * 1 2 3 24 24 H 1.09007 * 109.46829 * 214.15290 * 1 2 3 25 25 H 1.09001 * 109.47725 * 334.14733 * 1 2 3 26 26 H 0.97002 * 119.99782 * 5.15481 * 6 4 3 27 27 H 1.08996 * 109.47508 * 300.00398 * 9 7 6 28 28 H 1.09004 * 109.46855 * 59.99504 * 9 7 6 29 29 H 1.09001 * 109.47106 * 180.02562 * 10 9 7 30 30 H 1.08994 * 109.47140 * 60.00391 * 10 9 7 31 31 H 0.96700 * 114.00067 * 60.00249 * 13 11 10 32 32 H 1.09005 * 109.47422 * 179.97438 * 14 11 10 33 33 H 1.09000 * 109.47095 * 59.99972 * 14 11 10 34 34 H 1.09000 * 109.47077 * 299.99864 * 15 7 6 35 35 H 1.09001 * 109.46835 * 60.00476 * 15 7 6 36 36 H 1.08007 * 126.45728 * 179.97438 * 16 3 2 37 37 H 1.09001 * 109.47260 * 174.40086 * 20 19 17 38 38 H 0.96698 * 114.00343 * 59.99761 * 21 20 19 39 39 H 1.48494 * 109.99998 * 63.68611 * 22 20 19 40 40 H 1.48497 * 109.99934 * 185.01239 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1181 0.0000 4 6 1.8119 2.5123 0.0005 5 8 0.6260 2.7648 -0.1031 6 7 2.7066 3.5137 0.1158 7 6 2.2446 4.8992 0.2300 8 1 1.3471 5.0339 -0.3737 9 6 1.9263 5.2117 1.6936 10 6 1.4443 6.6589 1.8130 11 6 2.5402 7.6040 1.3163 12 1 3.4377 7.4690 1.9201 13 8 2.0903 8.9557 1.4284 14 6 2.8585 7.2915 -0.1472 15 6 3.3400 5.8447 -0.2668 16 6 3.5781 0.6893 -0.0006 17 6 3.5529 -0.7093 -0.0015 18 35 5.0610 -1.8501 -0.0098 19 6 2.2559 -1.1014 -0.0021 20 6 1.7714 -2.5285 -0.0037 21 8 2.1455 -3.1570 -1.2313 22 14 2.5399 -3.4468 1.4235 23 1 -0.3634 -0.0745 -1.0249 24 1 -0.3633 -0.8505 0.5770 25 1 -0.3634 0.9248 0.4481 26 1 3.6565 3.3170 0.1232 27 1 1.1459 4.5381 2.0476 28 1 2.8238 5.0770 2.2973 29 1 1.2180 6.8816 2.8557 30 1 0.5470 6.7940 1.2093 31 1 1.8703 9.2234 2.3311 32 1 3.6390 7.9651 -0.5012 33 1 1.9612 7.4266 -0.7510 34 1 4.2375 5.7101 0.3369 35 1 3.5667 5.6221 -1.3095 36 1 4.4582 1.3153 -0.0011 37 1 0.6861 -2.5439 0.0964 38 1 3.0996 -3.1794 -1.3871 39 1 2.0874 -2.8576 2.7092 40 1 2.1666 -4.8828 1.3634 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:29 Heat of formation + Delta-G solvation = -74.670742 kcal Electronic energy + Delta-G solvation = -24462.072151 eV Core-core repulsion = 20710.941788 eV Total energy + Delta-G solvation = -3751.130362 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.057 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.90954 -40.95072 -39.48621 -37.94572 -37.03811 -34.99892 -34.23228 -32.33272 -31.89589 -31.10803 -29.50413 -27.45672 -26.81983 -23.97294 -23.79196 -22.74250 -21.46225 -21.16270 -20.45494 -19.09260 -18.32859 -18.17744 -17.45572 -17.29567 -16.73841 -16.36525 -15.84709 -15.68268 -15.51614 -15.45298 -14.89766 -14.71858 -14.62818 -14.39749 -14.21969 -14.13908 -13.86057 -13.37512 -13.29677 -13.23222 -13.02396 -12.63584 -12.46808 -12.39661 -12.19339 -12.01240 -11.77043 -11.57661 -11.30587 -11.17256 -10.89127 -10.78623 -10.24349 -9.85726 -9.35851 -5.01068 0.11163 0.47065 0.88385 1.15849 1.44799 1.54654 1.83551 2.11118 2.21417 3.14994 3.25885 3.39306 3.50998 3.59558 3.65173 3.69171 3.81047 4.00365 4.09093 4.09372 4.20088 4.24719 4.28698 4.35963 4.37795 4.42510 4.52507 4.60682 4.67789 4.87014 4.93949 5.00227 5.08025 5.11250 5.22251 5.25054 5.30288 5.42858 5.55817 5.74012 6.36109 6.38030 6.86654 7.02225 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.398 5.398 3 C -0.056 4.056 4 C 0.590 3.410 5 O -0.579 6.579 6 N -0.697 5.697 7 C 0.147 3.853 8 H 0.068 0.932 9 C -0.121 4.121 10 C -0.145 4.145 11 C 0.103 3.897 12 H 0.073 0.927 13 O -0.590 6.590 14 C -0.112 4.112 15 C -0.113 4.113 16 C -0.092 4.092 17 C -0.184 4.184 18 Br 0.036 6.964 19 C 0.049 3.951 20 C -0.053 4.053 21 O -0.540 6.540 22 Si 0.716 3.284 23 H 0.086 0.914 24 H 0.101 0.899 25 H 0.100 0.900 26 H 0.419 0.581 27 H 0.049 0.951 28 H 0.085 0.915 29 H 0.078 0.922 30 H 0.056 0.944 31 H 0.394 0.606 32 H 0.079 0.921 33 H 0.057 0.943 34 H 0.096 0.904 35 H 0.085 0.915 36 H 0.189 0.811 37 H 0.121 0.879 38 H 0.389 0.611 39 H -0.277 1.277 40 H -0.264 1.264 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.840 0.848 2.188 6.294 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.071 5.071 3 C -0.170 4.170 4 C 0.379 3.621 5 O -0.460 6.460 6 N -0.349 5.349 7 C 0.043 3.957 8 H 0.086 0.914 9 C -0.160 4.160 10 C -0.183 4.183 11 C 0.044 3.956 12 H 0.091 0.909 13 O -0.398 6.398 14 C -0.150 4.150 15 C -0.151 4.151 16 C -0.118 4.118 17 C -0.269 4.269 18 Br 0.120 6.880 19 C -0.073 4.073 20 C -0.163 4.163 21 O -0.347 6.347 22 Si 0.617 3.383 23 H 0.104 0.896 24 H 0.120 0.880 25 H 0.118 0.882 26 H 0.257 0.743 27 H 0.068 0.932 28 H 0.104 0.896 29 H 0.097 0.903 30 H 0.074 0.926 31 H 0.244 0.756 32 H 0.098 0.902 33 H 0.076 0.924 34 H 0.114 0.886 35 H 0.104 0.896 36 H 0.206 0.794 37 H 0.138 0.862 38 H 0.239 0.761 39 H -0.203 1.203 40 H -0.189 1.189 Dipole moment (debyes) X Y Z Total from point charges 4.473 0.096 2.131 4.956 hybrid contribution -1.096 0.433 0.271 1.210 sum 3.376 0.529 2.403 4.178 Atomic orbital electron populations 1.22476 0.74827 1.06041 1.04932 1.43961 1.07612 1.04285 1.51217 1.20174 0.90530 0.87582 1.18743 1.17016 0.85473 0.83873 0.75773 1.90804 1.17875 1.85104 1.52226 1.45564 1.10300 1.05577 1.73419 1.21046 0.98471 0.79471 0.96730 0.91414 1.21805 1.02024 0.95959 0.96194 1.22182 0.99174 0.94670 1.02295 1.21918 0.95662 0.80825 0.97176 0.90948 1.86484 1.88761 1.29072 1.35521 1.21420 1.02107 0.96279 0.95232 1.21694 0.97858 0.92283 1.03282 1.21550 0.95413 0.92856 1.02028 1.20850 0.91021 0.95247 1.19803 1.96615 1.33974 1.60400 1.97027 1.21084 0.90043 0.89965 1.06243 1.24833 1.04719 0.88725 0.98011 1.86514 1.30521 1.79165 1.38548 0.93146 0.94046 0.77597 0.73556 0.89556 0.88048 0.88192 0.74308 0.93191 0.89623 0.90302 0.92555 0.75645 0.90211 0.92379 0.88576 0.89648 0.79432 0.86192 0.76115 1.20256 1.18933 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.09 10.24 127.77 1.31 1.39 16 2 N -0.40 -1.43 3.16 -519.61 -1.64 -3.08 16 3 C -0.06 -0.14 6.88 40.35 0.28 0.13 16 4 C 0.59 2.35 7.73 86.44 0.67 3.01 16 5 O -0.58 -6.47 14.28 -4.35 -0.06 -6.53 16 6 N -0.70 2.04 5.06 -446.49 -2.26 -0.22 16 7 C 0.15 -0.30 2.50 44.99 0.11 -0.18 16 8 H 0.07 0.26 7.51 -2.39 -0.02 0.24 16 9 C -0.12 0.26 5.49 30.59 0.17 0.43 16 10 C -0.14 0.31 5.55 30.59 0.17 0.48 16 11 C 0.10 -0.27 3.47 30.59 0.11 -0.16 16 12 H 0.07 -0.40 8.14 -2.38 -0.02 -0.42 16 13 O -0.59 -0.43 13.32 -148.98 -1.98 -2.41 16 14 C -0.11 0.28 5.57 30.58 0.17 0.45 16 15 C -0.11 0.72 5.39 30.58 0.16 0.88 16 16 C -0.09 0.18 10.34 22.58 0.23 0.42 16 17 C -0.18 0.07 6.04 22.03 0.13 0.21 16 18 Br 0.04 -0.15 29.40 -20.37 -0.60 -0.75 16 19 C 0.05 0.10 5.48 41.35 0.23 0.33 16 20 C -0.05 -0.07 2.83 71.24 0.20 0.13 16 21 O -0.54 -1.44 12.88 -148.98 -1.92 -3.36 16 22 Si 0.72 0.71 29.63 68.60 2.03 2.74 16 23 H 0.09 0.09 8.14 -2.39 -0.02 0.07 16 24 H 0.10 -0.28 7.10 -2.38 -0.02 -0.30 16 25 H 0.10 0.42 6.21 -2.39 -0.01 0.40 16 26 H 0.42 -3.89 7.51 -92.71 -0.70 -4.58 16 27 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 28 H 0.09 -0.46 8.14 -2.38 -0.02 -0.48 16 29 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 30 H 0.06 0.09 8.14 -2.39 -0.02 0.08 16 31 H 0.39 -2.73 9.08 -74.06 -0.67 -3.40 16 32 H 0.08 -0.21 8.14 -2.38 -0.02 -0.23 16 33 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 34 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 35 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 36 H 0.19 -1.73 7.45 -2.91 -0.02 -1.75 16 37 H 0.12 0.02 6.54 -2.39 -0.02 0.01 16 38 H 0.39 -0.95 7.22 -74.06 -0.53 -1.48 16 39 H -0.28 -1.64 7.11 99.48 0.71 -0.93 16 40 H -0.26 -1.48 7.11 99.48 0.71 -0.78 16 Total: 0.00 -18.19 339.50 -3.27 -21.45 By element: Atomic # 1 Polarization: -14.60 SS G_CDS: -0.77 Total: -15.37 kcal Atomic # 6 Polarization: 3.59 SS G_CDS: 3.94 Total: 7.53 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -3.90 Total: -3.30 kcal Atomic # 8 Polarization: -8.34 SS G_CDS: -3.97 Total: -12.30 kcal Atomic # 14 Polarization: 0.71 SS G_CDS: 2.03 Total: 2.74 kcal Atomic # 35 Polarization: -0.15 SS G_CDS: -0.60 Total: -0.75 kcal Total: -18.19 -3.27 -21.45 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.219 kcal (2) G-P(sol) polarization free energy of solvation -18.186 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.266 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.671 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds