Wall clock time and date at job start Sat Mar 6 2021 15:02:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.36000 * 116.99268 * 2 1 4 4 C 1.39159 * 120.06475 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07712 * 359.97438 * 4 3 2 6 6 C 1.42893 * 116.99827 * 179.97438 * 5 4 3 7 7 C 1.50703 * 109.46977 * 179.97438 * 6 5 4 8 8 O 1.21278 * 119.99866 * 359.97438 * 7 6 5 9 9 N 1.34781 * 120.00101 * 179.97438 * 7 6 5 10 10 C 1.46499 * 119.99874 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.47391 * 325.00213 * 10 9 7 12 12 C 1.53000 * 109.46840 * 85.00543 * 10 9 7 13 13 C 1.53001 * 109.46886 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.46963 * 299.99499 * 13 12 10 15 15 H 1.09002 * 109.47067 * 300.00341 * 14 13 12 16 16 O 1.42900 * 109.47442 * 180.02562 * 14 13 12 17 17 C 1.52997 * 109.47092 * 60.00194 * 14 13 12 18 18 C 1.53002 * 109.46799 * 205.00309 * 10 9 7 19 19 C 1.38565 * 119.84673 * 180.25429 * 4 3 2 20 20 C 1.38235 * 120.00207 * 359.43075 * 19 4 3 21 21 C 1.38259 * 120.14700 * 0.59357 * 20 19 4 22 22 C 1.50702 * 119.92653 * 179.70217 * 21 20 19 23 23 O 1.42901 * 109.47066 * 244.97558 * 22 21 20 24 24 Si 1.86296 * 109.47294 * 4.97956 * 22 21 20 25 25 C 1.38243 * 120.14358 * 359.67921 * 21 20 19 26 26 H 1.09001 * 109.47145 * 299.99341 * 1 2 3 27 27 H 1.08997 * 109.47737 * 60.00136 * 1 2 3 28 28 H 1.09003 * 109.47163 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47397 * 60.00148 * 6 5 4 30 30 H 1.09003 * 109.47076 * 299.99481 * 6 5 4 31 31 H 0.97002 * 119.99716 * 0.02562 * 9 7 6 32 32 H 1.09001 * 109.47194 * 299.99493 * 12 10 9 33 33 H 1.08992 * 109.47399 * 59.99666 * 12 10 9 34 34 H 1.09000 * 109.47437 * 180.02562 * 13 12 10 35 35 H 1.09002 * 109.47508 * 59.99571 * 13 12 10 36 36 H 0.96697 * 113.99983 * 59.99480 * 16 14 13 37 37 H 1.09001 * 109.47375 * 180.02562 * 17 14 13 38 38 H 1.09002 * 109.47497 * 59.99850 * 17 14 13 39 39 H 1.09002 * 109.47075 * 299.99543 * 18 10 9 40 40 H 1.08996 * 109.47407 * 60.00500 * 18 10 9 41 41 H 1.08008 * 119.99812 * 179.72127 * 19 4 3 42 42 H 1.07999 * 119.93195 * 180.29644 * 20 19 4 43 43 H 1.08999 * 109.46789 * 124.98332 * 22 21 20 44 44 H 0.96708 * 113.99497 * 60.00381 * 23 22 21 45 45 H 1.48495 * 110.00099 * 179.97438 * 24 22 21 46 46 H 1.48497 * 109.99890 * 301.31895 * 24 22 21 47 47 H 1.07994 * 119.99837 * 180.02562 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2119 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1478 -0.0005 6 6 5.6002 0.3009 -0.0017 7 6 6.2519 -1.0579 -0.0009 8 8 5.5670 -2.0589 0.0010 9 7 7.5958 -1.1609 -0.0022 10 6 8.2292 -2.4818 -0.0009 11 1 7.6279 -3.1726 0.5903 12 6 8.3348 -2.9982 -1.4372 13 6 8.9958 -4.3781 -1.4358 14 6 10.3958 -4.2723 -0.8277 15 1 10.9974 -3.5818 -1.4188 16 8 11.0134 -5.5609 -0.8268 17 6 10.2902 -3.7559 0.6086 18 6 9.6292 -2.3754 0.6071 19 6 4.0601 2.5235 0.0048 20 6 3.3027 3.6799 -0.0013 21 6 1.9221 3.6058 -0.0002 22 6 1.1014 4.8697 -0.0001 23 8 0.3648 4.9591 1.2212 24 14 2.2305 6.3435 -0.1538 25 6 1.2930 2.3748 0.0001 26 1 -0.3633 0.5137 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 5.9071 0.8511 0.8878 30 1 5.9058 0.8502 -0.8922 31 1 8.1435 -0.3603 -0.0034 32 1 7.3374 -3.0740 -1.8704 33 1 8.9360 -2.3075 -2.0284 34 1 9.0714 -4.7458 -2.4591 35 1 8.3941 -5.0686 -0.8447 36 1 11.1130 -5.9499 -1.7065 37 1 11.2876 -3.6801 1.0417 38 1 9.6885 -4.4463 1.1998 39 1 10.2305 -1.6848 0.0158 40 1 9.5540 -2.0076 1.6303 41 1 5.1385 2.5842 0.0089 42 1 3.7905 4.6435 -0.0019 43 1 0.4088 4.8531 -0.8416 44 1 0.9185 4.9784 2.0139 45 1 1.4331 7.5962 -0.1555 46 1 3.2004 6.3596 0.9705 47 1 0.2145 2.3196 0.0005 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:34 Heat of formation + Delta-G solvation = -161.670248 kcal Electronic energy + Delta-G solvation = -29190.396195 eV Core-core repulsion = 24919.609022 eV Total energy + Delta-G solvation = -4270.787174 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.81365 -41.12504 -39.87669 -39.08872 -38.87442 -37.10431 -36.87537 -34.55499 -32.09982 -31.96939 -31.49580 -30.43813 -28.65808 -28.27551 -26.21578 -23.98798 -23.88704 -23.08689 -22.47361 -21.60115 -21.02650 -19.78352 -18.67797 -18.38504 -18.23570 -17.98695 -17.52779 -17.26835 -17.08792 -16.62285 -16.23315 -16.15777 -15.87104 -15.80199 -15.59573 -15.51208 -15.22530 -14.72644 -14.69482 -14.33808 -14.21842 -13.75055 -13.59284 -13.48365 -13.42345 -13.33628 -13.07304 -12.64532 -12.56369 -12.50992 -12.27921 -12.18481 -12.13834 -12.00973 -11.83754 -11.64706 -11.37971 -10.91601 -10.78443 -10.63655 -10.17358 -9.79758 -8.86782 -4.99817 0.16484 0.28833 1.24450 1.42696 1.50771 1.55288 1.92549 2.31254 2.50566 2.55378 3.13007 3.33089 3.42966 3.53189 3.60298 3.61716 3.75380 3.77887 3.89312 3.91871 3.93407 4.04340 4.09946 4.11435 4.18654 4.24871 4.28597 4.30401 4.33040 4.34131 4.51956 4.54835 4.55922 4.64752 4.74110 4.86778 4.92619 4.99087 4.99901 5.04175 5.09201 5.15675 5.23570 5.35917 5.37279 5.54558 5.95720 6.32492 6.36769 6.54045 6.65471 7.11120 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.516 3.484 8 O -0.507 6.507 9 N -0.726 5.726 10 C 0.145 3.855 11 H 0.093 0.907 12 C -0.128 4.128 13 C -0.150 4.150 14 C 0.103 3.897 15 H 0.056 0.944 16 O -0.568 6.568 17 C -0.110 4.110 18 C -0.123 4.123 19 C -0.170 4.170 20 C -0.115 4.115 21 C -0.113 4.113 22 C -0.073 4.073 23 O -0.530 6.530 24 Si 0.688 3.312 25 C -0.146 4.146 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.103 0.897 29 H 0.094 0.906 30 H 0.095 0.905 31 H 0.402 0.598 32 H 0.073 0.927 33 H 0.067 0.933 34 H 0.070 0.930 35 H 0.075 0.925 36 H 0.380 0.620 37 H 0.077 0.923 38 H 0.075 0.925 39 H 0.072 0.928 40 H 0.078 0.922 41 H 0.139 0.861 42 H 0.133 0.867 43 H 0.118 0.882 44 H 0.376 0.624 45 H -0.257 1.257 46 H -0.260 1.260 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.419 3.973 -2.633 6.500 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.300 3.700 8 O -0.381 6.381 9 N -0.379 5.379 10 C 0.041 3.959 11 H 0.111 0.889 12 C -0.167 4.167 13 C -0.188 4.188 14 C 0.044 3.956 15 H 0.074 0.926 16 O -0.374 6.374 17 C -0.148 4.148 18 C -0.161 4.161 19 C -0.189 4.189 20 C -0.132 4.132 21 C -0.114 4.114 22 C -0.183 4.183 23 O -0.336 6.336 24 Si 0.589 3.411 25 C -0.165 4.165 26 H 0.075 0.925 27 H 0.075 0.925 28 H 0.121 0.879 29 H 0.112 0.888 30 H 0.113 0.887 31 H 0.236 0.764 32 H 0.092 0.908 33 H 0.086 0.914 34 H 0.088 0.912 35 H 0.094 0.906 36 H 0.227 0.773 37 H 0.096 0.904 38 H 0.093 0.907 39 H 0.091 0.909 40 H 0.097 0.903 41 H 0.157 0.843 42 H 0.150 0.850 43 H 0.136 0.864 44 H 0.224 0.776 45 H -0.183 1.183 46 H -0.185 1.185 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.686 3.680 -2.021 5.587 hybrid contribution -0.097 0.278 0.445 0.534 sum 3.589 3.958 -1.576 5.570 Atomic orbital electron populations 1.23132 0.78115 1.04416 1.01366 1.86253 1.21337 1.25326 1.88535 1.18286 0.89025 0.85573 1.01037 1.18288 0.88312 0.85777 1.01716 1.86279 1.16056 1.27744 1.88825 1.22487 0.81286 0.96323 1.03961 1.20032 0.82502 0.90549 0.76873 1.90801 1.62593 1.37989 1.46670 1.45883 1.05859 1.09636 1.76548 1.21074 0.93703 0.84113 0.97027 0.88909 1.21871 1.01825 0.96441 0.96516 1.22242 0.97084 0.97685 1.01838 1.21848 0.92054 0.84803 0.96887 0.92599 1.86518 1.82562 1.33674 1.34628 1.21416 1.01973 0.95683 0.95768 1.21777 0.94539 0.97787 1.02012 1.20987 1.00447 0.90679 1.06742 1.20733 0.92896 0.98025 1.01595 1.19974 0.93686 0.95091 1.02632 1.25010 1.01685 1.01721 0.89846 1.86603 1.36173 1.95484 1.15371 0.94938 0.79612 0.76423 0.90090 1.20941 1.00372 0.90408 1.04739 0.92524 0.92504 0.87871 0.88850 0.88724 0.76404 0.90824 0.91443 0.91179 0.90639 0.77265 0.90435 0.90663 0.90901 0.90321 0.84325 0.85006 0.86428 0.77611 1.18257 1.18476 0.84202 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.31 10.28 -34.24 -0.35 -1.66 16 3 C 0.11 0.35 6.70 -39.12 -0.26 0.09 16 4 C 0.10 0.27 6.70 -39.12 -0.26 0.01 16 5 O -0.28 -1.06 9.45 -47.35 -0.45 -1.50 16 6 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 7 C 0.52 0.76 7.87 -10.98 -0.09 0.68 16 8 O -0.51 -3.43 16.16 -14.35 -0.23 -3.66 16 9 N -0.73 1.38 5.08 -53.80 -0.27 1.10 16 10 C 0.14 -0.14 2.45 -67.93 -0.17 -0.30 16 11 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 12 C -0.13 0.10 5.49 -26.73 -0.15 -0.05 16 13 C -0.15 0.13 5.55 -26.73 -0.15 -0.02 16 14 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 15 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 16 O -0.57 -0.34 13.32 -35.23 -0.47 -0.81 16 17 C -0.11 0.12 5.58 -26.70 -0.15 -0.03 16 18 C -0.12 0.33 5.40 -26.70 -0.14 0.19 16 19 C -0.17 0.07 9.04 -39.46 -0.36 -0.29 16 20 C -0.11 0.08 8.66 -39.57 -0.34 -0.26 16 21 C -0.11 -0.03 5.35 -104.61 -0.56 -0.59 16 22 C -0.07 0.03 2.80 36.01 0.10 0.14 16 23 O -0.53 -0.54 12.83 -35.23 -0.45 -0.99 16 24 Si 0.69 -1.01 29.88 -169.99 -5.08 -6.08 16 25 C -0.15 -0.21 8.67 -39.46 -0.34 -0.55 16 26 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 27 H 0.06 -0.05 7.66 -51.93 -0.40 -0.45 16 28 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.09 -0.33 7.65 -51.93 -0.40 -0.73 16 30 H 0.09 -0.35 7.68 -51.93 -0.40 -0.75 16 31 H 0.40 -2.13 8.60 -40.82 -0.35 -2.48 16 32 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 33 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 35 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 36 H 0.38 -1.21 9.08 45.56 0.41 -0.79 16 37 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 40 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 41 H 0.14 -0.49 6.30 -52.48 -0.33 -0.82 16 42 H 0.13 -0.36 4.83 -52.49 -0.25 -0.61 16 43 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 44 H 0.38 -0.65 8.70 45.56 0.40 -0.25 16 45 H -0.26 -0.51 7.11 56.52 0.40 -0.10 16 46 H -0.26 -0.06 7.01 56.52 0.40 0.34 16 47 H 0.14 0.06 6.30 -52.49 -0.33 -0.27 16 LS Contribution 381.29 15.07 5.75 5.75 Total: 0.00 -11.55 381.29 -9.62 -21.17 By element: Atomic # 1 Polarization: -7.01 SS G_CDS: -6.28 Total: -13.29 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -1.78 Total: -0.01 kcal Atomic # 7 Polarization: 1.38 SS G_CDS: -0.27 Total: 1.10 kcal Atomic # 8 Polarization: -6.68 SS G_CDS: -1.95 Total: -8.63 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.08 Total: -6.08 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -11.55 -9.62 -21.17 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.501 kcal (2) G-P(sol) polarization free energy of solvation -11.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.047 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.623 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.169 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds