Wall clock time and date at job start Sat Mar 6 2021 15:02:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.36000 * 116.99268 * 2 1 4 4 C 1.39159 * 120.06475 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07712 * 359.97438 * 4 3 2 6 6 C 1.42893 * 116.99827 * 179.97438 * 5 4 3 7 7 C 1.50703 * 109.46977 * 179.97438 * 6 5 4 8 8 O 1.21278 * 119.99866 * 359.97438 * 7 6 5 9 9 N 1.34781 * 120.00101 * 179.97438 * 7 6 5 10 10 C 1.46499 * 119.99874 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.47391 * 325.00213 * 10 9 7 12 12 C 1.53000 * 109.46840 * 85.00543 * 10 9 7 13 13 C 1.53001 * 109.46886 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.46963 * 299.99499 * 13 12 10 15 15 H 1.09002 * 109.47067 * 300.00341 * 14 13 12 16 16 O 1.42900 * 109.47442 * 180.02562 * 14 13 12 17 17 C 1.52997 * 109.47092 * 60.00194 * 14 13 12 18 18 C 1.53002 * 109.46799 * 205.00309 * 10 9 7 19 19 C 1.38565 * 119.84673 * 180.25429 * 4 3 2 20 20 C 1.38235 * 120.00207 * 359.43075 * 19 4 3 21 21 C 1.38259 * 120.14700 * 0.59357 * 20 19 4 22 22 C 1.50702 * 119.92653 * 179.70217 * 21 20 19 23 23 O 1.42901 * 109.47066 * 244.97558 * 22 21 20 24 24 Si 1.86296 * 109.47294 * 4.97956 * 22 21 20 25 25 C 1.38243 * 120.14358 * 359.67921 * 21 20 19 26 26 H 1.09001 * 109.47145 * 299.99341 * 1 2 3 27 27 H 1.08997 * 109.47737 * 60.00136 * 1 2 3 28 28 H 1.09003 * 109.47163 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47397 * 60.00148 * 6 5 4 30 30 H 1.09003 * 109.47076 * 299.99481 * 6 5 4 31 31 H 0.97002 * 119.99716 * 0.02562 * 9 7 6 32 32 H 1.09001 * 109.47194 * 299.99493 * 12 10 9 33 33 H 1.08992 * 109.47399 * 59.99666 * 12 10 9 34 34 H 1.09000 * 109.47437 * 180.02562 * 13 12 10 35 35 H 1.09002 * 109.47508 * 59.99571 * 13 12 10 36 36 H 0.96697 * 113.99983 * 59.99480 * 16 14 13 37 37 H 1.09001 * 109.47375 * 180.02562 * 17 14 13 38 38 H 1.09002 * 109.47497 * 59.99850 * 17 14 13 39 39 H 1.09002 * 109.47075 * 299.99543 * 18 10 9 40 40 H 1.08996 * 109.47407 * 60.00500 * 18 10 9 41 41 H 1.08008 * 119.99812 * 179.72127 * 19 4 3 42 42 H 1.07999 * 119.93195 * 180.29644 * 20 19 4 43 43 H 1.08999 * 109.46789 * 124.98332 * 22 21 20 44 44 H 0.96708 * 113.99497 * 60.00381 * 23 22 21 45 45 H 1.48495 * 110.00099 * 179.97438 * 24 22 21 46 46 H 1.48497 * 109.99890 * 301.31895 * 24 22 21 47 47 H 1.07994 * 119.99837 * 180.02562 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2119 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1478 -0.0005 6 6 5.6002 0.3009 -0.0017 7 6 6.2519 -1.0579 -0.0009 8 8 5.5670 -2.0589 0.0010 9 7 7.5958 -1.1609 -0.0022 10 6 8.2292 -2.4818 -0.0009 11 1 7.6279 -3.1726 0.5903 12 6 8.3348 -2.9982 -1.4372 13 6 8.9958 -4.3781 -1.4358 14 6 10.3958 -4.2723 -0.8277 15 1 10.9974 -3.5818 -1.4188 16 8 11.0134 -5.5609 -0.8268 17 6 10.2902 -3.7559 0.6086 18 6 9.6292 -2.3754 0.6071 19 6 4.0601 2.5235 0.0048 20 6 3.3027 3.6799 -0.0013 21 6 1.9221 3.6058 -0.0002 22 6 1.1014 4.8697 -0.0001 23 8 0.3648 4.9591 1.2212 24 14 2.2305 6.3435 -0.1538 25 6 1.2930 2.3748 0.0001 26 1 -0.3633 0.5137 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 5.9071 0.8511 0.8878 30 1 5.9058 0.8502 -0.8922 31 1 8.1435 -0.3603 -0.0034 32 1 7.3374 -3.0740 -1.8704 33 1 8.9360 -2.3075 -2.0284 34 1 9.0714 -4.7458 -2.4591 35 1 8.3941 -5.0686 -0.8447 36 1 11.1130 -5.9499 -1.7065 37 1 11.2876 -3.6801 1.0417 38 1 9.6885 -4.4463 1.1998 39 1 10.2305 -1.6848 0.0158 40 1 9.5540 -2.0076 1.6303 41 1 5.1385 2.5842 0.0089 42 1 3.7905 4.6435 -0.0019 43 1 0.4088 4.8531 -0.8416 44 1 0.9185 4.9784 2.0139 45 1 1.4331 7.5962 -0.1555 46 1 3.2004 6.3596 0.9705 47 1 0.2145 2.3196 0.0005 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:33 Heat of formation + Delta-G solvation = -167.264688 kcal Electronic energy + Delta-G solvation = -29190.638789 eV Core-core repulsion = 24919.609022 eV Total energy + Delta-G solvation = -4271.029767 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.84349 -41.15700 -39.88161 -39.17137 -38.90193 -37.11181 -36.91083 -34.58750 -32.09564 -31.88618 -31.48928 -30.43166 -28.64158 -28.25486 -26.19254 -23.94042 -23.83374 -23.06726 -22.47663 -21.62517 -20.96879 -19.80329 -18.68862 -18.39722 -18.20778 -18.00072 -17.52462 -17.30066 -17.10576 -16.68942 -16.20771 -16.13627 -15.85772 -15.80793 -15.56439 -15.50085 -15.22378 -14.73101 -14.69760 -14.34929 -14.19148 -13.78300 -13.57182 -13.45971 -13.36834 -13.27201 -13.01456 -12.63321 -12.59231 -12.46384 -12.20849 -12.16661 -12.14016 -12.00140 -11.76546 -11.62403 -11.30556 -11.01148 -10.77817 -10.61162 -10.17761 -9.79296 -8.92767 -4.88115 0.16313 0.27437 1.33482 1.45070 1.47400 1.63474 1.99792 2.30341 2.54947 2.55425 3.25897 3.40867 3.52969 3.59849 3.66000 3.69179 3.85406 3.90214 4.00845 4.04383 4.07599 4.13196 4.13974 4.20355 4.27689 4.28726 4.29621 4.35296 4.38809 4.42317 4.56835 4.63195 4.64623 4.65236 4.87581 4.94085 5.00412 5.00486 5.08183 5.10970 5.12171 5.23007 5.29274 5.36672 5.43054 5.59148 5.96337 6.41826 6.49181 6.54349 6.86008 7.15101 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.335 6.335 3 C 0.075 3.925 4 C 0.085 3.915 5 O -0.315 6.315 6 C 0.035 3.965 7 C 0.511 3.489 8 O -0.574 6.574 9 N -0.704 5.704 10 C 0.144 3.856 11 H 0.059 0.941 12 C -0.122 4.122 13 C -0.147 4.147 14 C 0.104 3.896 15 H 0.075 0.925 16 O -0.590 6.590 17 C -0.114 4.114 18 C -0.111 4.111 19 C -0.159 4.159 20 C -0.111 4.111 21 C -0.116 4.116 22 C -0.086 4.086 23 O -0.551 6.551 24 Si 0.778 3.222 25 C -0.151 4.151 26 H 0.062 0.938 27 H 0.066 0.934 28 H 0.110 0.890 29 H 0.127 0.873 30 H 0.131 0.869 31 H 0.423 0.577 32 H 0.046 0.954 33 H 0.089 0.911 34 H 0.078 0.922 35 H 0.052 0.948 36 H 0.394 0.606 37 H 0.080 0.920 38 H 0.055 0.945 39 H 0.098 0.902 40 H 0.086 0.914 41 H 0.176 0.824 42 H 0.158 0.842 43 H 0.121 0.879 44 H 0.386 0.614 45 H -0.307 1.307 46 H -0.273 1.273 47 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.664 6.355 -3.105 9.718 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.030 3.970 4 C 0.040 3.960 5 O -0.229 6.229 6 C -0.043 4.043 7 C 0.297 3.703 8 O -0.452 6.452 9 N -0.358 5.358 10 C 0.040 3.960 11 H 0.077 0.923 12 C -0.161 4.161 13 C -0.185 4.185 14 C 0.045 3.955 15 H 0.093 0.907 16 O -0.399 6.399 17 C -0.152 4.152 18 C -0.149 4.149 19 C -0.178 4.178 20 C -0.128 4.128 21 C -0.116 4.116 22 C -0.194 4.194 23 O -0.359 6.359 24 Si 0.682 3.318 25 C -0.170 4.170 26 H 0.080 0.920 27 H 0.085 0.915 28 H 0.128 0.872 29 H 0.144 0.856 30 H 0.148 0.852 31 H 0.261 0.739 32 H 0.065 0.935 33 H 0.108 0.892 34 H 0.097 0.903 35 H 0.071 0.929 36 H 0.244 0.756 37 H 0.099 0.901 38 H 0.074 0.926 39 H 0.117 0.883 40 H 0.104 0.896 41 H 0.193 0.807 42 H 0.175 0.825 43 H 0.139 0.861 44 H 0.235 0.765 45 H -0.236 1.236 46 H -0.199 1.199 47 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 5.979 6.070 -2.502 8.879 hybrid contribution -0.814 -0.454 0.599 1.108 sum 5.165 5.615 -1.904 7.863 Atomic orbital electron populations 1.23279 0.76840 1.05170 1.02106 1.86194 1.22979 1.26668 1.89103 1.18688 0.89952 0.85614 1.02741 1.18599 0.88183 0.86546 1.02669 1.86223 1.18286 1.29103 1.89282 1.22787 0.79298 0.95096 1.07093 1.20617 0.83124 0.90870 0.75644 1.90777 1.64168 1.40252 1.49978 1.45704 1.05086 1.10226 1.74811 1.21001 0.94356 0.84014 0.96660 0.92294 1.21804 1.00649 0.96973 0.96638 1.22199 0.97088 0.97253 1.01970 1.21917 0.91769 0.84690 0.97103 0.90726 1.86483 1.82665 1.34519 1.36231 1.21458 1.01870 0.96287 0.95589 1.21702 0.93090 0.97306 1.02761 1.21378 1.02274 0.89280 1.04829 1.21046 0.92435 0.99106 1.00252 1.20119 0.94442 0.94686 1.02378 1.25323 1.02242 1.02277 0.89533 1.86574 1.37396 1.95598 1.16324 0.93955 0.77280 0.72318 0.88204 1.21017 1.00494 0.90546 1.04964 0.91966 0.91527 0.87167 0.85572 0.85193 0.73867 0.93508 0.89247 0.90305 0.92938 0.75640 0.90110 0.92642 0.88302 0.89583 0.80654 0.82480 0.86072 0.76456 1.23613 1.19935 0.84131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.06 9.81 113.37 1.11 1.17 16 2 O -0.34 -3.80 10.28 -79.69 -0.82 -4.62 16 3 C 0.08 0.61 6.70 22.57 0.15 0.76 16 4 C 0.09 0.46 6.70 22.57 0.15 0.61 16 5 O -0.32 -2.69 9.45 -67.08 -0.63 -3.33 16 6 C 0.03 -0.09 5.22 71.24 0.37 0.28 16 7 C 0.51 1.82 7.87 87.66 0.69 2.51 16 8 O -0.57 -9.44 16.16 16.01 0.26 -9.19 16 9 N -0.70 3.14 5.08 -442.52 -2.25 0.89 16 10 C 0.14 -0.20 2.45 44.99 0.11 -0.09 16 11 H 0.06 0.35 7.58 -2.39 -0.02 0.33 16 12 C -0.12 0.13 5.49 30.59 0.17 0.30 16 13 C -0.15 0.12 5.55 30.60 0.17 0.29 16 14 C 0.10 -0.20 3.47 30.59 0.11 -0.10 16 15 H 0.07 -0.40 8.14 -2.39 -0.02 -0.42 16 16 O -0.59 -0.85 13.32 -148.98 -1.98 -2.83 16 17 C -0.11 0.23 5.58 30.61 0.17 0.40 16 18 C -0.11 0.72 5.40 30.61 0.17 0.88 16 19 C -0.16 0.46 9.04 22.35 0.20 0.66 16 20 C -0.11 0.39 8.66 22.27 0.19 0.58 16 21 C -0.12 0.02 5.35 -19.86 -0.11 -0.09 16 22 C -0.09 0.13 2.80 71.24 0.20 0.33 16 23 O -0.55 -1.12 12.83 -148.98 -1.91 -3.03 16 24 Si 0.78 -3.34 29.88 68.60 2.05 -1.29 16 25 C -0.15 -0.56 8.67 22.35 0.19 -0.37 16 26 H 0.06 0.05 7.66 -2.39 -0.02 0.03 16 27 H 0.07 0.00 7.66 -2.39 -0.02 -0.02 16 28 H 0.11 0.02 8.14 -2.39 -0.02 0.00 16 29 H 0.13 -1.23 7.65 -2.39 -0.02 -1.24 16 30 H 0.13 -1.33 7.68 -2.39 -0.02 -1.35 16 31 H 0.42 -5.56 8.60 -92.71 -0.80 -6.36 16 32 H 0.05 0.22 8.14 -2.39 -0.02 0.20 16 33 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 34 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 35 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 36 H 0.39 -2.47 9.08 -74.06 -0.67 -3.14 16 37 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 38 H 0.05 0.10 8.14 -2.39 -0.02 0.08 16 39 H 0.10 -1.09 8.14 -2.39 -0.02 -1.11 16 40 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 41 H 0.18 -1.97 6.30 -2.91 -0.02 -1.99 16 42 H 0.16 -1.39 4.83 -2.91 -0.01 -1.41 16 43 H 0.12 -0.32 7.96 -2.39 -0.02 -0.34 16 44 H 0.39 -1.40 8.70 -74.05 -0.64 -2.04 16 45 H -0.31 -1.29 7.11 99.48 0.71 -0.59 16 46 H -0.27 0.53 7.01 99.48 0.70 1.23 16 47 H 0.14 0.32 6.30 -2.91 -0.02 0.30 16 Total: 0.00 -32.24 381.29 -2.31 -34.55 By element: Atomic # 1 Polarization: -18.21 SS G_CDS: -1.07 Total: -19.28 kcal Atomic # 6 Polarization: 4.08 SS G_CDS: 4.05 Total: 8.13 kcal Atomic # 7 Polarization: 3.14 SS G_CDS: -2.25 Total: 0.89 kcal Atomic # 8 Polarization: -17.91 SS G_CDS: -5.09 Total: -23.00 kcal Atomic # 14 Polarization: -3.34 SS G_CDS: 2.05 Total: -1.29 kcal Total: -32.24 -2.31 -34.55 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.719 kcal (2) G-P(sol) polarization free energy of solvation -32.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.959 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.546 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds