Wall clock time and date at job start Sat Mar 6 2021 15:02:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42910 * 1 3 3 Si 1.86304 * 109.46939 * 2 1 4 4 C 1.50696 * 109.47088 * 120.00030 * 2 1 3 5 5 C 1.38236 * 119.94066 * 244.97719 * 4 2 1 6 6 C 1.38193 * 120.07117 * 179.70328 * 5 4 2 7 7 C 1.38674 * 119.95222 * 0.61885 * 6 5 4 8 8 O 1.35915 * 120.05888 * 179.67755 * 7 6 5 9 9 C 1.42898 * 117.00200 * 359.72839 * 8 7 6 10 10 C 1.50697 * 109.47428 * 180.02562 * 9 8 7 11 11 O 1.21278 * 119.99879 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99981 * 180.02562 * 10 9 8 13 13 C 1.46505 * 119.99797 * 179.97438 * 12 10 9 14 14 H 1.08992 * 109.47276 * 325.00066 * 13 12 10 15 15 C 1.53002 * 109.46958 * 84.99979 * 13 12 10 16 16 C 1.52997 * 109.46978 * 180.02562 * 15 13 12 17 17 C 1.53006 * 109.47164 * 299.99874 * 16 15 13 18 18 H 1.08998 * 109.46505 * 299.99708 * 17 16 15 19 19 O 1.42895 * 109.47000 * 180.02562 * 17 16 15 20 20 C 1.52997 * 109.47127 * 59.99836 * 17 16 15 21 21 C 1.52996 * 109.46998 * 204.99519 * 13 12 10 22 22 C 1.38829 * 119.88129 * 359.40516 * 7 6 5 23 23 Br 1.89111 * 120.03601 * 180.29784 * 22 7 6 24 24 C 1.38195 * 119.93212 * 0.27557 * 22 7 6 25 25 H 0.96699 * 113.99349 * 299.99718 * 1 2 3 26 26 H 1.09002 * 109.46745 * 240.00218 * 2 1 3 27 27 H 1.48500 * 109.99963 * 300.00080 * 3 2 1 28 28 H 1.48494 * 109.99777 * 61.32121 * 3 2 1 29 29 H 1.08001 * 119.96231 * 0.02562 * 5 4 2 30 30 H 1.07998 * 120.02294 * 180.29671 * 6 5 4 31 31 H 1.08998 * 109.47253 * 59.99731 * 9 8 7 32 32 H 1.09005 * 109.47090 * 300.00087 * 9 8 7 33 33 H 0.97001 * 120.00457 * 359.97438 * 12 10 9 34 34 H 1.09002 * 109.47097 * 299.99818 * 15 13 12 35 35 H 1.09001 * 109.47142 * 59.99782 * 15 13 12 36 36 H 1.09001 * 109.47375 * 59.99908 * 16 15 13 37 37 H 1.09000 * 109.47140 * 179.97438 * 16 15 13 38 38 H 0.96698 * 114.00355 * 60.00121 * 19 17 16 39 39 H 1.09002 * 109.47153 * 180.02562 * 20 17 16 40 40 H 1.09001 * 109.46832 * 60.00321 * 20 17 16 41 41 H 1.09004 * 109.47368 * 60.00227 * 21 13 12 42 42 H 1.09001 * 109.47372 * 300.00383 * 21 13 12 43 43 H 1.07998 * 119.98180 * 180.02562 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6391 -0.0112 2.1902 6 6 3.0957 -0.6586 3.3225 7 6 2.8547 -2.0139 3.4898 8 8 3.3084 -2.6542 4.5995 9 6 4.0319 -1.8706 5.5505 10 6 4.4526 -2.7434 6.7046 11 8 4.1612 -3.9207 6.7123 12 7 5.1518 -2.2156 7.7288 13 6 5.5603 -3.0641 8.8511 14 1 4.7892 -3.8104 9.0419 15 6 6.8755 -3.7662 8.5072 16 6 7.3018 -4.6528 9.6790 17 6 7.4957 -3.7897 10.9275 18 1 8.2670 -3.0436 10.7370 19 8 7.8944 -4.6178 12.0217 20 6 6.1805 -3.0876 11.2713 21 6 5.7544 -2.2006 10.0991 22 6 2.1442 -2.7144 2.5244 23 35 1.8057 -4.5610 2.7521 24 6 1.6841 -2.0607 1.3971 25 1 -0.3932 0.4417 0.7651 26 1 1.7924 -0.5138 -0.8900 27 1 1.5615 2.4679 -1.2085 28 1 1.5880 2.4585 1.2242 29 1 2.8308 1.0433 2.0575 30 1 3.6443 -0.1105 4.0741 31 1 3.3954 -1.0651 5.9168 32 1 4.9163 -1.4469 5.0745 33 1 5.3846 -1.2740 7.7229 34 1 6.7373 -4.3814 7.6181 35 1 7.6467 -3.0199 8.3164 36 1 6.5305 -5.3991 9.8694 37 1 8.2386 -5.1534 9.4339 38 1 8.7225 -5.0944 11.8730 39 1 6.3187 -2.4724 12.1604 40 1 5.4092 -3.8339 11.4617 41 1 4.8174 -1.7003 10.3441 42 1 6.5256 -1.4543 9.9082 43 1 1.1309 -2.6048 0.6458 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:37 Heat of formation + Delta-G solvation = -127.479222 kcal Electronic energy + Delta-G solvation = -26861.863837 eV Core-core repulsion = 22726.961106 eV Total energy + Delta-G solvation = -4134.902731 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.061 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.72647 -40.99037 -39.74783 -39.02375 -37.37155 -36.95984 -34.58767 -33.60935 -31.97481 -31.88368 -30.80150 -30.20668 -28.50167 -26.32901 -24.19630 -23.88920 -23.14712 -22.36390 -21.62491 -20.97444 -19.59202 -18.64793 -18.27474 -18.15250 -17.50486 -17.31726 -17.12728 -16.46337 -16.17639 -16.07132 -15.70275 -15.63157 -15.49485 -15.07619 -14.77853 -14.71332 -14.49199 -14.22465 -13.86223 -13.79853 -13.59543 -13.36880 -13.27127 -13.00938 -12.48409 -12.39651 -12.21582 -12.20918 -12.16518 -11.89531 -11.76304 -11.69480 -11.30456 -11.24447 -11.00973 -10.77837 -10.60071 -10.16950 -9.97299 -9.33721 -4.88833 -0.05807 0.11638 0.63640 1.33623 1.40890 1.46084 1.62078 2.01642 2.38704 2.49056 3.25487 3.41052 3.49535 3.58507 3.61407 3.69240 3.75662 3.82554 4.00904 4.03047 4.06443 4.11644 4.12287 4.20304 4.28862 4.32395 4.39080 4.42391 4.58127 4.63397 4.64710 4.85113 4.87701 4.94355 5.00027 5.00657 5.08379 5.11019 5.23021 5.23273 5.29496 5.42788 5.49047 6.06458 6.47000 6.50683 6.85727 7.15691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.085 4.085 3 Si 0.779 3.221 4 C -0.149 4.149 5 C -0.055 4.055 6 C -0.189 4.189 7 C 0.149 3.851 8 O -0.307 6.307 9 C 0.033 3.967 10 C 0.511 3.489 11 O -0.570 6.570 12 N -0.704 5.704 13 C 0.145 3.855 14 H 0.059 0.941 15 C -0.122 4.122 16 C -0.147 4.147 17 C 0.103 3.897 18 H 0.075 0.925 19 O -0.591 6.591 20 C -0.114 4.114 21 C -0.111 4.111 22 C -0.145 4.145 23 Br -0.056 7.056 24 C -0.035 4.035 25 H 0.387 0.613 26 H 0.122 0.878 27 H -0.309 1.309 28 H -0.269 1.269 29 H 0.165 0.835 30 H 0.181 0.819 31 H 0.131 0.869 32 H 0.135 0.865 33 H 0.423 0.577 34 H 0.047 0.953 35 H 0.089 0.911 36 H 0.051 0.949 37 H 0.078 0.922 38 H 0.394 0.606 39 H 0.080 0.920 40 H 0.055 0.945 41 H 0.086 0.914 42 H 0.098 0.902 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.939 10.085 1.512 12.335 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.193 4.193 3 Si 0.683 3.317 4 C -0.151 4.151 5 C -0.073 4.073 6 C -0.208 4.208 7 C 0.101 3.899 8 O -0.219 6.219 9 C -0.045 4.045 10 C 0.297 3.703 11 O -0.447 6.447 12 N -0.359 5.359 13 C 0.041 3.959 14 H 0.078 0.922 15 C -0.160 4.160 16 C -0.185 4.185 17 C 0.045 3.955 18 H 0.092 0.908 19 O -0.399 6.399 20 C -0.152 4.152 21 C -0.149 4.149 22 C -0.225 4.225 23 Br 0.029 6.971 24 C -0.055 4.055 25 H 0.236 0.764 26 H 0.140 0.860 27 H -0.238 1.238 28 H -0.195 1.195 29 H 0.182 0.818 30 H 0.198 0.802 31 H 0.149 0.851 32 H 0.152 0.848 33 H 0.261 0.739 34 H 0.066 0.934 35 H 0.107 0.893 36 H 0.070 0.930 37 H 0.096 0.904 38 H 0.244 0.756 39 H 0.098 0.902 40 H 0.073 0.927 41 H 0.104 0.896 42 H 0.117 0.883 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 5.912 9.081 1.389 10.925 hybrid contribution -0.725 -0.323 0.065 0.796 sum 5.188 8.758 1.454 10.283 Atomic orbital electron populations 1.86598 1.18685 1.80458 1.50187 1.25336 0.83382 1.12488 0.98118 0.94079 0.89838 0.70992 0.76755 1.20285 1.02550 0.93567 0.98654 1.21297 0.93544 1.00885 0.91585 1.21566 1.06070 0.91456 1.01688 1.18811 0.93244 0.91770 0.86061 1.86249 1.68670 1.37980 1.28990 1.22872 0.99741 0.93608 0.88247 1.20566 0.77756 0.88033 0.83965 1.90795 1.55914 1.18873 1.79168 1.45699 1.55811 1.14388 1.19976 1.20981 0.96043 0.93063 0.85850 0.92248 1.21802 0.97371 0.99324 0.97535 1.22199 1.02266 0.98721 0.95355 1.21921 0.96923 0.91685 0.84971 0.90753 1.86482 1.46765 1.64263 1.42424 1.21459 0.95963 0.98927 0.98876 1.21700 1.03823 0.97711 0.91635 1.21289 1.09828 0.91871 0.99539 1.96764 1.94959 1.07648 1.97720 1.20891 0.95727 0.94485 0.94375 0.76404 0.86046 1.23757 1.19526 0.81816 0.80228 0.85136 0.84783 0.73879 0.93420 0.89277 0.92965 0.90371 0.75649 0.90173 0.92661 0.89578 0.88325 0.84620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.67 12.83 -148.98 -1.91 -2.58 16 2 C -0.09 0.25 2.80 71.23 0.20 0.45 16 3 Si 0.78 -4.62 29.88 68.60 2.05 -2.57 16 4 C -0.15 0.33 5.35 -19.85 -0.11 0.22 16 5 C -0.06 0.36 8.66 22.26 0.19 0.55 16 6 C -0.19 1.17 9.04 22.36 0.20 1.37 16 7 C 0.15 0.27 6.68 22.52 0.15 0.42 16 8 O -0.31 -1.31 9.01 -73.55 -0.66 -1.97 16 9 C 0.03 -0.19 5.22 71.23 0.37 0.18 16 10 C 0.51 0.53 7.87 87.66 0.69 1.22 16 11 O -0.57 -7.87 16.16 16.01 0.26 -7.61 16 12 N -0.70 4.41 5.08 -442.54 -2.25 2.16 16 13 C 0.15 -0.38 2.45 44.99 0.11 -0.27 16 14 H 0.06 0.28 7.58 -2.39 -0.02 0.26 16 15 C -0.12 0.26 5.49 30.59 0.17 0.43 16 16 C -0.15 0.21 5.54 30.60 0.17 0.38 16 17 C 0.10 -0.26 3.47 30.60 0.11 -0.15 16 18 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 19 O -0.59 -0.64 13.32 -148.98 -1.98 -2.62 16 20 C -0.11 0.30 5.58 30.61 0.17 0.47 16 21 C -0.11 0.82 5.39 30.61 0.17 0.98 16 22 C -0.15 -0.80 6.24 22.40 0.14 -0.66 16 23 Br -0.06 -0.55 33.16 -20.37 -0.68 -1.22 16 24 C -0.03 -0.09 9.42 22.27 0.21 0.12 16 25 H 0.39 -1.84 8.70 -74.06 -0.64 -2.48 16 26 H 0.12 -0.44 7.96 -2.39 -0.02 -0.46 16 27 H -0.31 -0.99 7.11 99.48 0.71 -0.28 16 28 H -0.27 1.11 7.01 99.48 0.70 1.81 16 29 H 0.16 -1.98 4.83 -2.91 -0.01 -2.00 16 30 H 0.18 -2.64 6.30 -2.91 -0.02 -2.66 16 31 H 0.13 -1.69 7.65 -2.39 -0.02 -1.71 16 32 H 0.13 -1.80 7.67 -2.38 -0.02 -1.82 16 33 H 0.42 -6.29 8.60 -92.71 -0.80 -7.09 16 34 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 35 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 36 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 37 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 38 H 0.39 -2.58 9.08 -74.06 -0.67 -3.26 16 39 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 40 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 41 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 42 H 0.10 -1.17 8.14 -2.39 -0.02 -1.19 16 43 H 0.14 0.41 8.06 -2.91 -0.02 0.39 16 Total: 0.00 -29.91 372.47 -3.25 -33.16 By element: Atomic # 1 Polarization: -21.43 SS G_CDS: -1.01 Total: -22.45 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: 2.94 Total: 5.71 kcal Atomic # 7 Polarization: 4.41 SS G_CDS: -2.25 Total: 2.16 kcal Atomic # 8 Polarization: -10.49 SS G_CDS: -4.30 Total: -14.79 kcal Atomic # 14 Polarization: -4.62 SS G_CDS: 2.05 Total: -2.57 kcal Atomic # 35 Polarization: -0.55 SS G_CDS: -0.68 Total: -1.22 kcal Total: -29.91 -3.25 -33.16 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.320 kcal (2) G-P(sol) polarization free energy of solvation -29.911 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.248 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds