Wall clock time and date at job start Sat Mar 6 2021 15:02:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 C 1.46900 * 110.99579 * 2 1 4 4 C 1.50702 * 109.47576 * 293.95028 * 3 2 1 5 5 O 1.21286 * 119.99614 * 0.02562 * 4 3 2 6 6 N 1.34768 * 120.00132 * 180.02562 * 4 3 2 7 7 C 1.46501 * 119.99906 * 180.02562 * 6 4 3 8 8 H 1.08997 * 109.47324 * 34.99816 * 7 6 4 9 9 C 1.52998 * 109.47313 * 155.00357 * 7 6 4 10 10 C 1.52998 * 109.47429 * 180.02562 * 9 7 6 11 11 C 1.52999 * 109.46788 * 299.99799 * 10 9 7 12 12 H 1.09008 * 109.47201 * 299.99563 * 11 10 9 13 13 O 1.42903 * 109.47256 * 180.02562 * 11 10 9 14 14 C 1.53001 * 109.47329 * 59.99953 * 11 10 9 15 15 C 1.52998 * 109.46901 * 299.99578 * 14 11 10 16 16 C 1.39669 * 110.99918 * 123.95410 * 2 1 3 17 17 C 1.38892 * 120.07420 * 116.04984 * 16 2 1 18 18 C 1.50697 * 120.03802 * 359.97438 * 17 16 2 19 19 O 1.42898 * 109.47290 * 285.00351 * 18 17 16 20 20 Si 1.86301 * 109.47326 * 165.00281 * 18 17 16 21 21 C 1.38119 * 119.92625 * 179.97438 * 17 16 2 22 22 C 1.38269 * 120.07607 * 0.02562 * 21 17 16 23 23 C 1.50696 * 119.92565 * 179.97438 * 22 21 17 24 24 F 1.39898 * 109.46951 * 90.00244 * 23 22 21 25 25 F 1.39899 * 109.47224 * 209.99920 * 23 22 21 26 26 F 1.39901 * 109.47337 * 330.00085 * 23 22 21 27 27 C 1.38304 * 120.14682 * 359.97438 * 22 21 17 28 28 C 1.38091 * 120.07523 * 359.74227 * 27 22 21 29 29 H 1.09003 * 109.46749 * 59.99909 * 1 2 3 30 30 H 1.09002 * 109.47153 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47335 * 300.00047 * 1 2 3 32 32 H 1.09013 * 109.46903 * 173.95322 * 3 2 1 33 33 H 1.09000 * 109.47532 * 53.95570 * 3 2 1 34 34 H 0.97000 * 120.00606 * 0.02562 * 6 4 3 35 35 H 1.08997 * 109.47366 * 59.99485 * 9 7 6 36 36 H 1.09009 * 109.46785 * 299.99754 * 9 7 6 37 37 H 1.08997 * 109.47384 * 179.97438 * 10 9 7 38 38 H 1.08997 * 109.47329 * 59.99386 * 10 9 7 39 39 H 0.96700 * 114.00311 * 180.02562 * 13 11 10 40 40 H 1.08997 * 109.47215 * 60.00152 * 14 11 10 41 41 H 1.08999 * 109.47164 * 180.02562 * 14 11 10 42 42 H 1.08997 * 109.47655 * 300.00305 * 15 14 11 43 43 H 1.09005 * 109.46908 * 179.97438 * 15 14 11 44 44 H 1.09002 * 109.47652 * 44.99914 * 18 17 16 45 45 H 0.96701 * 114.00087 * 59.99335 * 19 18 17 46 46 H 1.48504 * 109.99670 * 299.99872 * 20 18 17 47 47 H 1.48500 * 109.99962 * 61.31743 * 20 18 17 48 48 H 1.08003 * 119.96667 * 179.97438 * 21 17 16 49 49 H 1.08002 * 119.96322 * 180.02562 * 27 22 21 50 50 H 1.08002 * 120.03751 * 180.27828 * 28 27 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9953 1.3715 0.0000 4 6 1.6369 2.0472 -1.2985 5 8 1.0047 1.4456 -2.1408 6 7 2.0188 3.3199 -1.5237 7 6 1.6698 3.9769 -2.7857 8 1 0.6894 3.6332 -3.1154 9 6 1.6361 5.4926 -2.5794 10 6 1.2710 6.1787 -3.8972 11 6 2.3162 5.8318 -4.9594 12 1 3.2968 6.1757 -4.6302 13 8 1.9756 6.4732 -6.1902 14 6 2.3500 4.3162 -5.1658 15 6 2.7151 3.6301 -3.8479 16 6 1.9695 -0.7283 1.0816 17 6 2.7117 -1.8813 0.8606 18 6 2.9778 -2.3489 -0.5471 19 8 1.7908 -2.9329 -1.0874 20 14 4.3427 -3.6168 -0.5328 21 6 3.2056 -2.5988 1.9324 22 6 2.9616 -2.1709 3.2243 23 6 3.5016 -2.9567 4.3913 24 9 4.7750 -2.4822 4.7237 25 9 2.6473 -2.8079 5.4891 26 9 3.5839 -4.3095 4.0445 27 6 2.2229 -1.0232 3.4480 28 6 1.7311 -0.2978 2.3808 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 3.0797 1.3445 0.1083 33 1 1.5610 1.9274 0.8309 34 1 2.5247 3.8009 -0.8502 35 1 2.6165 5.8363 -2.2497 36 1 0.8911 5.7397 -1.8229 37 1 1.2465 7.2585 -3.7501 38 1 0.2905 5.8349 -4.2265 39 1 2.5962 6.2968 -6.9105 40 1 1.3695 3.9724 -5.4950 41 1 3.0949 4.0690 -5.9221 42 1 3.6956 3.9739 -3.5186 43 1 2.7388 2.5502 -3.9948 44 1 3.2770 -1.4998 -1.1616 45 1 1.0370 -2.3283 -1.1252 46 1 5.5828 -3.0216 0.0269 47 1 3.9343 -4.7936 0.2756 48 1 3.7825 -3.4957 1.7613 49 1 2.0344 -0.6914 4.4583 50 1 1.1581 0.6007 2.5561 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:40 Heat of formation + Delta-G solvation = -227.623315 kcal Electronic energy + Delta-G solvation = -37427.224871 eV Core-core repulsion = 32006.079066 eV Total energy + Delta-G solvation = -5421.145805 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.165 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -51.38283 -48.90849 -48.84383 -41.88339 -40.96996 -39.64165 -37.83989 -37.60954 -36.83558 -34.47668 -33.11936 -32.25796 -31.86609 -30.36522 -28.49444 -27.66902 -27.00000 -25.19898 -23.87709 -23.75256 -22.97669 -22.08074 -21.47345 -20.86667 -19.73553 -19.68278 -19.57362 -18.51796 -18.23402 -18.17821 -17.90684 -17.22167 -16.98551 -16.56494 -16.31961 -16.12369 -15.81850 -15.76461 -15.68574 -15.51858 -15.44143 -15.27190 -15.07961 -15.03563 -15.00272 -14.97827 -14.74308 -14.56607 -14.29375 -14.02526 -13.98787 -13.69075 -13.35814 -13.33653 -13.24665 -13.18149 -12.95258 -12.79622 -12.64025 -12.41088 -12.31049 -12.17126 -11.73234 -11.45459 -11.27471 -11.08612 -10.91221 -10.75096 -10.37003 -10.20368 -10.06904 -9.69217 -4.90016 -0.49729 -0.12777 1.30132 1.42100 1.55336 1.61881 1.86821 1.88827 2.05387 2.47339 2.65623 2.77280 3.17847 3.27765 3.40189 3.45891 3.59023 3.66958 3.72780 3.80157 3.94279 3.96422 4.01421 4.04054 4.12600 4.14090 4.21809 4.25014 4.31407 4.33376 4.40124 4.43324 4.44025 4.45954 4.53744 4.66272 4.79993 4.84453 4.88918 4.95904 4.97356 5.02863 5.06783 5.10494 5.12274 5.24925 5.26414 5.34600 5.51829 5.54906 6.01167 6.56680 6.59177 6.86176 7.28116 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.502 5.502 3 C 0.038 3.962 4 C 0.515 3.485 5 O -0.557 6.557 6 N -0.715 5.715 7 C 0.148 3.852 8 H 0.064 0.936 9 C -0.113 4.113 10 C -0.113 4.113 11 C 0.103 3.897 12 H 0.070 0.930 13 O -0.591 6.591 14 C -0.145 4.145 15 C -0.120 4.120 16 C 0.136 3.864 17 C -0.099 4.099 18 C -0.071 4.071 19 O -0.544 6.544 20 Si 0.787 3.213 21 C -0.084 4.084 22 C -0.187 4.187 23 C 0.507 3.493 24 F -0.179 7.179 25 F -0.173 7.173 26 F -0.186 7.186 27 C -0.052 4.052 28 C -0.134 4.134 29 H 0.084 0.916 30 H 0.071 0.929 31 H 0.048 0.952 32 H 0.122 0.878 33 H 0.101 0.899 34 H 0.416 0.584 35 H 0.091 0.909 36 H 0.084 0.916 37 H 0.076 0.924 38 H 0.058 0.942 39 H 0.394 0.606 40 H 0.055 0.945 41 H 0.076 0.924 42 H 0.080 0.920 43 H 0.051 0.949 44 H 0.090 0.910 45 H 0.372 0.628 46 H -0.260 1.260 47 H -0.288 1.288 48 H 0.126 0.874 49 H 0.161 0.839 50 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.068 7.374 0.365 7.667 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.224 5.224 3 C -0.091 4.091 4 C 0.301 3.699 5 O -0.435 6.435 6 N -0.368 5.368 7 C 0.043 3.957 8 H 0.083 0.917 9 C -0.150 4.150 10 C -0.151 4.151 11 C 0.044 3.956 12 H 0.088 0.912 13 O -0.399 6.399 14 C -0.184 4.184 15 C -0.159 4.159 16 C 0.042 3.958 17 C -0.100 4.100 18 C -0.180 4.180 19 O -0.351 6.351 20 Si 0.689 3.311 21 C -0.102 4.102 22 C -0.189 4.189 23 C 0.453 3.547 24 F -0.160 7.160 25 F -0.155 7.155 26 F -0.167 7.167 27 C -0.071 4.071 28 C -0.154 4.154 29 H 0.103 0.897 30 H 0.089 0.911 31 H 0.067 0.933 32 H 0.140 0.860 33 H 0.119 0.881 34 H 0.253 0.747 35 H 0.109 0.891 36 H 0.103 0.897 37 H 0.095 0.905 38 H 0.076 0.924 39 H 0.243 0.757 40 H 0.074 0.926 41 H 0.095 0.905 42 H 0.099 0.901 43 H 0.070 0.930 44 H 0.108 0.892 45 H 0.221 0.779 46 H -0.186 1.186 47 H -0.215 1.215 48 H 0.143 0.857 49 H 0.178 0.822 50 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 2.205 5.970 0.134 6.366 hybrid contribution -0.494 0.889 1.578 1.877 sum 1.712 6.858 1.713 7.273 Atomic orbital electron populations 1.22652 0.83762 1.03272 1.02656 1.59158 1.09990 1.13401 1.39827 1.22173 1.03465 0.87883 0.95554 1.20678 0.78650 0.81750 0.88784 1.90716 1.40535 1.64603 1.47645 1.45902 1.57737 1.13292 1.19877 1.20906 0.98257 0.92805 0.83685 0.91732 1.21685 1.04182 0.91965 0.97207 1.21435 0.98590 1.01396 0.93692 1.21920 0.98273 0.90722 0.84680 0.91245 1.86483 1.56416 1.74517 1.22503 1.22180 1.02287 0.95888 0.98021 1.21787 0.99585 1.00117 0.94427 1.18818 0.94656 0.92775 0.89555 1.20322 0.98429 0.95215 0.96047 1.25199 0.95941 1.07070 0.89743 1.86675 1.21615 1.42067 1.84761 0.92388 0.74075 0.76340 0.88281 1.20788 0.98730 0.99059 0.91611 1.19979 1.06779 1.00176 0.91939 1.18397 0.75781 0.77541 0.82990 1.93233 1.41278 1.88090 1.93383 1.93204 1.70288 1.95404 1.56568 1.93196 1.96169 1.35276 1.92052 1.21135 0.92883 0.91289 1.01746 1.21967 1.00490 1.01584 0.91341 0.89714 0.91053 0.93342 0.86040 0.88117 0.74668 0.89064 0.89737 0.90526 0.92363 0.75661 0.92598 0.90522 0.90091 0.92970 0.89197 0.77870 1.18592 1.21532 0.85687 0.82193 0.81594 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 8.63 127.69 1.10 1.04 16 2 N -0.50 1.55 3.22 -724.42 -2.33 -0.79 16 3 C 0.04 -0.29 5.03 85.56 0.43 0.14 16 4 C 0.52 -1.34 7.52 87.66 0.66 -0.68 16 5 O -0.56 -3.55 13.97 -3.05 -0.04 -3.60 16 6 N -0.72 5.22 5.08 -442.53 -2.25 2.97 16 7 C 0.15 -0.61 2.45 44.99 0.11 -0.50 16 8 H 0.06 0.12 7.58 -2.39 -0.02 0.10 16 9 C -0.11 0.86 5.39 30.59 0.16 1.02 16 10 C -0.11 0.35 5.57 30.59 0.17 0.52 16 11 C 0.10 -0.29 3.47 30.59 0.11 -0.18 16 12 H 0.07 -0.38 8.14 -2.38 -0.02 -0.40 16 13 O -0.59 -0.37 13.32 -148.98 -1.98 -2.36 16 14 C -0.15 0.37 5.55 30.59 0.17 0.53 16 15 C -0.12 0.38 5.50 30.60 0.17 0.55 16 16 C 0.14 -0.27 4.61 38.21 0.18 -0.09 16 17 C -0.10 -0.23 5.28 -19.74 -0.10 -0.34 16 18 C -0.07 -0.18 2.30 71.23 0.16 -0.01 16 19 O -0.54 -2.86 12.65 -148.98 -1.89 -4.74 16 20 Si 0.79 1.57 30.41 68.60 2.09 3.66 16 21 C -0.08 -0.38 8.01 22.25 0.18 -0.20 16 22 C -0.19 -0.50 5.46 -19.84 -0.11 -0.61 16 23 C 0.51 2.49 3.36 71.23 0.24 2.73 16 24 F -0.18 -1.05 17.30 44.97 0.78 -0.27 16 25 F -0.17 -0.75 16.46 44.97 0.74 -0.01 16 26 F -0.19 -1.49 16.46 44.97 0.74 -0.75 16 27 C -0.05 0.14 9.39 22.25 0.21 0.35 16 28 C -0.13 0.71 8.70 22.40 0.19 0.90 16 29 H 0.08 0.09 5.88 -2.39 -0.01 0.08 16 30 H 0.07 -0.16 7.53 -2.39 -0.02 -0.18 16 31 H 0.05 -0.31 7.49 -2.39 -0.02 -0.33 16 32 H 0.12 -1.20 8.06 -2.38 -0.02 -1.22 16 33 H 0.10 -1.29 7.46 -2.39 -0.02 -1.31 16 34 H 0.42 -5.69 8.60 -92.71 -0.80 -6.49 16 35 H 0.09 -1.00 8.14 -2.39 -0.02 -1.02 16 36 H 0.08 -0.73 8.14 -2.38 -0.02 -0.75 16 37 H 0.08 -0.23 8.14 -2.39 -0.02 -0.24 16 38 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 39 H 0.39 -2.74 9.08 -74.06 -0.67 -3.41 16 40 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 41 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 42 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 43 H 0.05 0.09 8.14 -2.38 -0.02 0.07 16 44 H 0.09 0.09 7.78 -2.39 -0.02 0.08 16 45 H 0.37 1.02 7.59 -74.06 -0.56 0.46 16 46 H -0.26 -1.03 7.11 99.48 0.71 -0.33 16 47 H -0.29 -2.39 6.81 99.48 0.68 -1.72 16 48 H 0.13 0.80 4.48 -2.91 -0.01 0.79 16 49 H 0.16 -1.05 7.60 -2.91 -0.02 -1.07 16 50 H 0.17 -1.85 7.17 -2.91 -0.02 -1.87 16 Total: 0.00 -19.15 408.55 -1.12 -20.27 By element: Atomic # 1 Polarization: -18.55 SS G_CDS: -1.00 Total: -19.55 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: 4.03 Total: 5.18 kcal Atomic # 7 Polarization: 6.76 SS G_CDS: -4.58 Total: 2.18 kcal Atomic # 8 Polarization: -6.79 SS G_CDS: -3.91 Total: -10.70 kcal Atomic # 9 Polarization: -3.30 SS G_CDS: 2.26 Total: -1.04 kcal Atomic # 14 Polarization: 1.57 SS G_CDS: 2.09 Total: 3.66 kcal Total: -19.15 -1.12 -20.27 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -207.352 kcal (2) G-P(sol) polarization free energy of solvation -19.148 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -226.501 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.123 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.271 kcal (6) G-S(sol) free energy of system = (1) + (5) -227.623 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds