Wall clock time and date at job start Sat Mar 6 2021 15:02:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46974 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00123 * 2 1 3 5 5 C 1.35457 * 125.56492 * 245.02911 * 4 2 1 6 6 C 1.39833 * 107.86545 * 179.97438 * 5 4 2 7 7 C 1.37878 * 107.08231 * 359.97438 * 6 5 4 8 8 C 1.46681 * 126.22822 * 180.02562 * 7 6 5 9 9 O 1.21696 * 120.00054 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99899 * 179.97438 * 8 7 6 11 11 C 1.46501 * 120.00335 * 179.97438 * 10 8 7 12 12 H 1.08997 * 109.46662 * 324.99963 * 11 10 8 13 13 C 1.53005 * 109.46992 * 84.99761 * 11 10 8 14 14 C 1.53001 * 109.47130 * 180.02562 * 13 11 10 15 15 C 1.52996 * 109.46765 * 300.00149 * 14 13 11 16 16 H 1.08997 * 109.47280 * 299.99591 * 15 14 13 17 17 O 1.42905 * 109.46962 * 179.97438 * 15 14 13 18 18 C 1.53005 * 109.47418 * 60.00028 * 15 14 13 19 19 C 1.52996 * 109.47128 * 205.00048 * 11 10 8 20 20 N 1.35526 * 125.56383 * 64.71508 * 4 2 1 21 21 H 0.96699 * 114.00604 * 59.99761 * 1 2 3 22 22 H 1.09002 * 109.46984 * 240.00143 * 2 1 3 23 23 H 1.48498 * 110.00005 * 60.00258 * 3 2 1 24 24 H 1.48501 * 110.00049 * 181.31921 * 3 2 1 25 25 H 1.07999 * 126.06560 * 359.97438 * 5 4 2 26 26 H 1.07995 * 126.45857 * 179.97438 * 6 5 4 27 27 H 0.97005 * 119.99800 * 359.97438 * 10 8 7 28 28 H 1.09002 * 109.46829 * 300.00230 * 13 11 10 29 29 H 1.09000 * 109.46979 * 60.00122 * 13 11 10 30 30 H 1.08992 * 109.47184 * 180.02562 * 14 13 11 31 31 H 1.08997 * 109.46887 * 59.99980 * 14 13 11 32 32 H 0.96696 * 113.99991 * 59.99655 * 17 15 14 33 33 H 1.08998 * 109.47193 * 179.97438 * 18 15 14 34 34 H 1.09000 * 109.46979 * 59.99988 * 18 15 14 35 35 H 1.08997 * 109.47280 * 299.99537 * 19 11 10 36 36 H 1.08992 * 109.47382 * 59.99930 * 19 11 10 37 37 H 0.97001 * 125.68265 * 0.02562 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6326 -0.1392 2.2389 6 6 2.9070 -1.1308 3.1859 7 6 2.3525 -2.3030 2.7173 8 6 2.3926 -3.6084 3.3849 9 8 2.9561 -3.7266 4.4570 10 7 1.8053 -4.6771 2.8109 11 6 1.8457 -5.9811 3.4773 12 1 2.7963 -6.0933 3.9987 13 6 0.6975 -6.0751 4.4842 14 6 0.7400 -7.4368 5.1806 15 6 0.5965 -8.5474 4.1381 16 1 -0.3540 -8.4356 3.6167 17 8 0.6369 -9.8192 4.7885 18 6 1.7448 -8.4534 3.1313 19 6 1.7019 -7.0914 2.4345 20 7 1.7502 -2.0238 1.5115 21 1 -0.3934 0.4417 -0.7650 22 1 1.7923 -0.5138 -0.8900 23 1 1.5614 2.4679 1.2085 24 1 3.5345 1.7704 -0.0321 25 1 2.9274 0.8979 2.3004 26 1 3.4507 -1.0026 4.1101 27 1 1.3558 -4.5828 1.9565 28 1 0.8000 -5.2841 5.2270 29 1 -0.2531 -5.9629 3.9627 30 1 -0.0782 -7.5039 5.8975 31 1 1.6906 -7.5485 5.7021 32 1 -0.0637 -9.9491 5.4422 33 1 1.6428 -9.2449 2.3889 34 1 2.6954 -8.5652 3.6528 35 1 0.7513 -6.9793 1.9131 36 1 2.5198 -7.0244 1.7173 37 1 1.2767 -2.6615 0.9547 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:44 Heat of formation + Delta-G solvation = -86.123373 kcal Electronic energy + Delta-G solvation = -20359.048545 eV Core-core repulsion = 17102.777181 eV Total energy + Delta-G solvation = -3256.271364 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.67782 -40.96594 -39.52180 -37.64454 -37.08520 -34.72479 -32.40194 -31.95223 -31.68824 -29.53854 -26.76361 -24.03886 -23.88883 -22.57486 -21.67773 -21.53011 -20.98604 -19.62635 -18.46726 -18.25004 -17.54283 -17.06360 -16.55697 -16.08373 -15.80724 -15.56338 -15.35055 -15.11636 -15.03291 -14.58462 -14.49186 -14.23098 -13.87749 -13.56158 -13.42207 -13.32597 -13.08893 -12.72245 -12.53608 -12.25648 -12.04843 -11.83776 -11.46287 -11.33505 -10.83602 -10.45844 -10.35176 -10.26705 -9.42525 -4.93521 0.14887 1.18909 1.33942 1.75003 1.80538 2.00346 2.10104 2.12832 3.21978 3.30667 3.49651 3.63113 3.68376 3.81809 3.94352 4.00974 4.03340 4.13714 4.14586 4.22331 4.31963 4.35986 4.39300 4.56547 4.76367 4.80076 4.82560 4.89680 4.94322 5.02586 5.05324 5.16897 5.19563 5.32849 5.42355 5.57304 6.16591 6.35491 6.83233 6.85127 6.93187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.061 4.061 3 Si 0.811 3.189 4 C 0.070 3.930 5 C -0.231 4.231 6 C -0.120 4.120 7 C -0.059 4.059 8 C 0.592 3.408 9 O -0.568 6.568 10 N -0.710 5.710 11 C 0.144 3.856 12 H 0.068 0.932 13 C -0.123 4.123 14 C -0.145 4.145 15 C 0.104 3.896 16 H 0.072 0.928 17 O -0.589 6.589 18 C -0.112 4.112 19 C -0.112 4.112 20 N -0.505 5.505 21 H 0.410 0.590 22 H 0.108 0.892 23 H -0.300 1.300 24 H -0.291 1.291 25 H 0.143 0.857 26 H 0.145 0.855 27 H 0.411 0.589 28 H 0.048 0.952 29 H 0.083 0.917 30 H 0.079 0.921 31 H 0.057 0.943 32 H 0.394 0.606 33 H 0.081 0.919 34 H 0.059 0.941 35 H 0.094 0.906 36 H 0.085 0.915 37 H 0.433 0.567 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.061 0.920 -9.181 10.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.171 4.171 3 Si 0.715 3.285 4 C -0.050 4.050 5 C -0.255 4.255 6 C -0.146 4.146 7 C -0.173 4.173 8 C 0.380 3.620 9 O -0.447 6.447 10 N -0.361 5.361 11 C 0.040 3.960 12 H 0.086 0.914 13 C -0.161 4.161 14 C -0.183 4.183 15 C 0.045 3.955 16 H 0.090 0.910 17 O -0.397 6.397 18 C -0.150 4.150 19 C -0.150 4.150 20 N -0.102 5.102 21 H 0.263 0.737 22 H 0.126 0.874 23 H -0.228 1.228 24 H -0.218 1.218 25 H 0.160 0.840 26 H 0.163 0.837 27 H 0.248 0.752 28 H 0.067 0.933 29 H 0.102 0.898 30 H 0.098 0.902 31 H 0.075 0.925 32 H 0.244 0.756 33 H 0.100 0.900 34 H 0.078 0.922 35 H 0.113 0.887 36 H 0.104 0.896 37 H 0.273 0.727 Dipole moment (debyes) X Y Z Total from point charges -3.684 0.841 -7.937 8.791 hybrid contribution -0.508 -0.522 0.600 0.944 sum -4.192 0.319 -7.337 8.456 Atomic orbital electron populations 1.86428 1.16611 1.82572 1.51970 1.24622 0.86326 1.11370 0.94748 0.94243 0.77009 0.73114 0.84103 1.20476 1.02179 0.84020 0.98305 1.20740 1.08643 0.99894 0.96187 1.21418 1.01759 0.91059 1.00394 1.20299 1.10412 0.95423 0.91189 1.17125 0.77999 0.82815 0.84080 1.90849 1.46156 1.84920 1.22819 1.45786 1.56787 1.08483 1.25002 1.21086 0.99320 0.81490 0.94125 0.91392 1.21809 0.99092 0.96996 0.98232 1.22185 1.02919 0.94370 0.98850 1.21900 0.99043 0.82058 0.92493 0.90981 1.86483 1.58008 1.35655 1.59560 1.21435 0.98227 0.97260 0.98081 1.21707 1.04682 0.91667 0.96956 1.41842 1.41971 1.09499 1.16912 0.73721 0.87399 1.22828 1.21840 0.83953 0.83682 0.75246 0.93308 0.89845 0.90213 0.92453 0.75595 0.90020 0.92241 0.88749 0.89626 0.72660 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 3.08 12.86 -148.98 -1.92 1.16 16 2 C -0.06 0.31 3.07 71.24 0.22 0.53 16 3 Si 0.81 -4.02 30.56 68.60 2.10 -1.92 16 4 C 0.07 0.17 6.50 41.35 0.27 0.44 16 5 C -0.23 -1.59 9.32 22.01 0.21 -1.39 16 6 C -0.12 -1.13 10.65 22.57 0.24 -0.88 16 7 C -0.06 -0.39 7.06 40.35 0.28 -0.11 16 8 C 0.59 4.74 7.75 86.45 0.67 5.41 16 9 O -0.57 -9.56 16.55 -4.33 -0.07 -9.63 16 10 N -0.71 0.19 5.07 -446.50 -2.27 -2.07 16 11 C 0.14 0.05 2.45 44.99 0.11 0.16 16 12 H 0.07 0.42 7.58 -2.39 -0.02 0.41 16 13 C -0.12 -0.06 5.49 30.60 0.17 0.11 16 14 C -0.14 0.05 5.55 30.59 0.17 0.22 16 15 C 0.10 -0.15 3.47 30.59 0.11 -0.04 16 16 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 17 O -0.59 -0.91 13.32 -148.98 -1.98 -2.90 16 18 C -0.11 0.17 5.57 30.61 0.17 0.34 16 19 C -0.11 0.56 5.39 30.61 0.17 0.72 16 20 N -0.50 -0.15 5.99 -171.93 -1.03 -1.18 16 21 H 0.41 -6.60 8.74 -74.06 -0.65 -7.25 16 22 H 0.11 -1.17 7.96 -2.39 -0.02 -1.18 16 23 H -0.30 -1.15 7.11 99.48 0.71 -0.44 16 24 H -0.29 -0.43 7.11 99.48 0.71 0.27 16 25 H 0.14 0.83 6.19 -2.91 -0.02 0.81 16 26 H 0.15 1.42 8.06 -2.91 -0.02 1.40 16 27 H 0.41 -2.99 7.73 -92.70 -0.72 -3.71 16 28 H 0.05 0.29 8.14 -2.39 -0.02 0.27 16 29 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 30 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 31 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 32 H 0.39 -2.42 9.08 -74.06 -0.67 -3.09 16 33 H 0.08 -0.17 8.14 -2.39 -0.02 -0.18 16 34 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 35 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 36 H 0.09 -0.51 8.14 -2.39 -0.02 -0.52 16 37 H 0.43 -2.96 8.19 -92.71 -0.76 -3.72 16 Total: 0.00 -25.35 307.64 -4.03 -29.38 By element: Atomic # 1 Polarization: -16.71 SS G_CDS: -1.64 Total: -18.34 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: 2.78 Total: 5.52 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -3.30 Total: -3.26 kcal Atomic # 8 Polarization: -7.40 SS G_CDS: -3.97 Total: -11.37 kcal Atomic # 14 Polarization: -4.02 SS G_CDS: 2.10 Total: -1.92 kcal Total: -25.35 -4.03 -29.38 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.747 kcal (2) G-P(sol) polarization free energy of solvation -25.349 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.095 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.377 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.123 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds