Wall clock time and date at job start Sat Mar 6 2021 15:02:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35966 * 116.99851 * 2 1 4 4 C 1.39452 * 120.12300 * 180.23490 * 3 2 1 5 5 O 1.34775 * 133.24200 * 359.93625 * 4 3 2 6 6 C 1.34932 * 110.84199 * 180.30721 * 5 4 3 7 7 C 1.46988 * 125.13841 * 179.97438 * 6 5 4 8 8 O 1.21660 * 119.99820 * 179.97438 * 7 6 5 9 9 N 1.34774 * 120.00217 * 0.02562 * 7 6 5 10 10 C 1.46505 * 119.99991 * 180.02562 * 9 7 6 11 11 H 1.09003 * 109.47045 * 34.99201 * 10 9 7 12 12 C 1.52990 * 109.47140 * 154.99759 * 10 9 7 13 13 C 1.53004 * 109.47111 * 180.02562 * 12 10 9 14 14 C 1.53005 * 109.46777 * 299.99745 * 13 12 10 15 15 H 1.09003 * 109.47062 * 299.99704 * 14 13 12 16 16 O 1.42902 * 109.46924 * 180.02562 * 14 13 12 17 17 C 1.52993 * 109.47415 * 60.00114 * 14 13 12 18 18 C 1.53004 * 109.46899 * 300.00076 * 17 14 13 19 19 C 1.35814 * 109.71860 * 359.97438 * 6 5 4 20 20 C 1.40606 * 119.13703 * 180.26909 * 4 3 2 21 21 C 1.39784 * 120.11985 * 359.74241 * 20 4 3 22 22 C 1.50695 * 120.09188 * 180.02562 * 21 20 4 23 23 O 1.42894 * 109.47419 * 74.97829 * 22 21 20 24 24 Si 1.86297 * 109.47025 * 194.98182 * 22 21 20 25 25 C 1.36622 * 119.81099 * 0.02562 * 21 20 4 26 26 C 1.38261 * 120.12120 * 359.97438 * 3 2 1 27 27 H 1.09003 * 109.47118 * 300.00367 * 1 2 3 28 28 H 1.09008 * 109.46774 * 60.00103 * 1 2 3 29 29 H 1.08998 * 109.47189 * 179.97438 * 1 2 3 30 30 H 0.96996 * 119.99887 * 359.97438 * 9 7 6 31 31 H 1.09005 * 109.47069 * 299.99203 * 12 10 9 32 32 H 1.09003 * 109.47607 * 59.99786 * 12 10 9 33 33 H 1.08999 * 109.47474 * 59.99708 * 13 12 10 34 34 H 1.09003 * 109.47283 * 180.02562 * 13 12 10 35 35 H 0.96704 * 113.99949 * 179.97438 * 16 14 13 36 36 H 1.08996 * 109.47366 * 59.99366 * 17 14 13 37 37 H 1.08996 * 109.47348 * 180.02562 * 17 14 13 38 38 H 1.08999 * 109.47258 * 299.99702 * 18 17 14 39 39 H 1.09003 * 109.47127 * 179.97438 * 18 17 14 40 40 H 1.07993 * 126.95327 * 180.02562 * 19 6 5 41 41 H 1.09000 * 109.47313 * 314.97959 * 22 21 20 42 42 H 0.96706 * 113.99966 * 59.99575 * 23 22 21 43 43 H 1.48504 * 110.00088 * 180.02562 * 24 22 21 44 44 H 1.48503 * 109.99773 * 301.31536 * 24 22 21 45 45 H 1.08007 * 119.75258 * 179.97438 * 25 21 20 46 46 H 1.08002 * 119.66343 * 0.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4387 1.2875 -0.0049 5 8 4.4141 0.3575 -0.0091 6 6 5.6318 0.9389 -0.0063 7 6 6.9131 0.2187 -0.0090 8 8 7.9596 0.8392 -0.0065 9 7 6.9288 -1.1289 -0.0152 10 6 8.2060 -1.8467 -0.0173 11 1 8.9346 -1.2934 0.5753 12 6 8.0095 -3.2389 0.5857 13 6 9.3435 -3.9883 0.5841 14 6 9.8516 -4.1219 -0.8529 15 1 9.1232 -4.6753 -1.4458 16 8 11.0972 -4.8223 -0.8545 17 6 10.0480 -2.7297 -1.4560 18 6 8.7140 -1.9803 -1.4543 19 6 5.4944 2.2901 -0.0007 20 6 4.0553 2.5511 0.0009 21 6 3.2764 3.7118 0.0061 22 6 3.9380 5.0657 0.0118 23 8 4.4605 5.3461 -1.2882 24 14 2.6862 6.3666 0.4718 25 6 1.9136 3.6151 0.0060 26 6 1.2956 2.3726 -0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8901 29 1 -0.3633 -1.0276 -0.0005 30 1 6.0944 -1.6236 -0.0175 31 1 7.6480 -3.1437 1.6097 32 1 7.2809 -3.7921 -0.0069 33 1 10.0718 -3.4350 1.1770 34 1 9.2035 -4.9804 1.0134 35 1 11.4787 -4.9442 -1.7346 36 1 10.7762 -2.1763 -0.8631 37 1 10.4095 -2.8249 -2.4798 38 1 7.9857 -2.5336 -2.0472 39 1 8.8540 -0.9882 -1.8836 40 1 6.2873 3.0232 0.0023 41 1 4.7503 5.0701 0.7386 42 1 3.7918 5.3581 -1.9867 43 1 3.3261 7.7066 0.4804 44 1 1.5578 6.3493 -0.4934 45 1 1.3126 4.5126 0.0105 46 1 0.2173 2.3120 -0.0005 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:47 Heat of formation + Delta-G solvation = -124.098427 kcal Electronic energy + Delta-G solvation = -30657.455049 eV Core-core repulsion = 26287.382450 eV Total energy + Delta-G solvation = -4370.072599 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.150 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -43.79113 -41.32395 -40.59792 -39.61389 -39.14163 -37.14772 -37.10689 -34.68091 -33.68733 -31.98708 -31.93175 -31.19100 -29.56313 -28.41654 -26.33982 -25.25320 -24.03527 -23.92861 -23.03334 -21.94253 -21.77303 -21.14180 -19.77994 -19.05660 -18.60863 -18.22303 -17.98018 -17.80319 -17.47109 -17.05761 -16.64873 -16.41846 -16.22141 -15.94104 -15.86724 -15.56791 -15.43724 -14.79283 -14.78020 -14.60225 -14.57419 -14.30038 -14.17476 -13.52987 -13.44660 -13.39542 -13.30143 -13.27883 -13.09331 -12.55266 -12.48201 -12.27415 -12.23150 -12.13928 -11.82437 -11.67101 -11.65631 -11.33550 -11.05123 -10.81592 -10.62006 -10.36557 -9.86016 -9.03343 -4.89460 -0.70654 0.07427 0.58034 1.13440 1.29577 1.58900 1.82820 1.84595 1.97650 2.12017 2.36974 3.10363 3.26983 3.38091 3.52328 3.53067 3.63794 3.64649 3.78988 3.84680 3.94271 3.96590 4.05143 4.14734 4.16492 4.24121 4.31412 4.33688 4.38484 4.41680 4.42403 4.48161 4.58408 4.76237 4.80358 4.81625 4.84556 4.87771 4.96723 5.02464 5.04757 5.07336 5.14163 5.18162 5.20709 5.30689 5.36684 5.55653 6.15622 6.26636 6.49012 6.77286 6.85211 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.333 6.333 3 C 0.138 3.862 4 C 0.021 3.979 5 O -0.180 6.180 6 C -0.033 4.033 7 C 0.602 3.398 8 O -0.545 6.545 9 N -0.699 5.699 10 C 0.142 3.858 11 H 0.076 0.924 12 C -0.114 4.114 13 C -0.111 4.111 14 C 0.103 3.897 15 H 0.070 0.930 16 O -0.588 6.588 17 C -0.144 4.144 18 C -0.124 4.124 19 C -0.113 4.113 20 C -0.096 4.096 21 C -0.100 4.100 22 C -0.090 4.090 23 O -0.548 6.548 24 Si 0.783 3.217 25 C -0.088 4.088 26 C -0.165 4.165 27 H 0.077 0.923 28 H 0.073 0.927 29 H 0.116 0.884 30 H 0.418 0.582 31 H 0.085 0.915 32 H 0.091 0.909 33 H 0.062 0.938 34 H 0.080 0.920 35 H 0.394 0.606 36 H 0.060 0.940 37 H 0.080 0.920 38 H 0.081 0.919 39 H 0.053 0.947 40 H 0.171 0.829 41 H 0.114 0.886 42 H 0.386 0.614 43 H -0.306 1.306 44 H -0.261 1.261 45 H 0.166 0.834 46 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.968 -2.140 0.398 9.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.247 6.247 3 C 0.092 3.908 4 C -0.027 4.027 5 O -0.082 6.082 6 C -0.083 4.083 7 C 0.388 3.612 8 O -0.424 6.424 9 N -0.349 5.349 10 C 0.038 3.962 11 H 0.094 0.906 12 C -0.152 4.152 13 C -0.149 4.149 14 C 0.044 3.956 15 H 0.088 0.912 16 O -0.397 6.397 17 C -0.182 4.182 18 C -0.163 4.163 19 C -0.134 4.134 20 C -0.097 4.097 21 C -0.101 4.101 22 C -0.198 4.198 23 O -0.356 6.356 24 Si 0.686 3.314 25 C -0.106 4.106 26 C -0.184 4.184 27 H 0.096 0.904 28 H 0.092 0.908 29 H 0.134 0.866 30 H 0.255 0.745 31 H 0.104 0.896 32 H 0.109 0.891 33 H 0.081 0.919 34 H 0.099 0.901 35 H 0.244 0.756 36 H 0.079 0.921 37 H 0.099 0.901 38 H 0.100 0.900 39 H 0.072 0.928 40 H 0.188 0.812 41 H 0.132 0.868 42 H 0.236 0.764 43 H -0.234 1.234 44 H -0.187 1.187 45 H 0.183 0.817 46 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -8.156 -1.519 1.121 8.372 hybrid contribution 0.209 -0.135 -1.877 1.894 sum -7.947 -1.654 -0.756 8.153 Atomic orbital electron populations 1.23491 0.75294 1.06036 1.03170 1.86146 1.24324 1.25785 1.88420 1.17977 0.86060 0.86869 0.99892 1.19213 0.88251 0.87087 1.08110 1.84010 1.12654 1.35022 1.76497 1.21916 0.84006 0.92701 1.09686 1.16691 0.85018 0.82832 0.76651 1.90898 1.31429 1.68270 1.51823 1.45918 1.11223 1.04862 1.72890 1.21197 0.84375 0.93299 0.97325 0.90589 1.21711 0.98031 0.92797 1.02683 1.21419 0.96277 1.01460 0.95722 1.21899 0.85694 0.90931 0.97043 0.91196 1.86483 1.38400 1.78548 1.36229 1.22177 0.97156 0.96618 1.02253 1.21827 0.97619 1.00651 0.96162 1.22849 0.95436 0.94420 1.00652 1.19571 0.92264 0.92849 1.05035 1.19551 0.93488 0.93846 1.03194 1.25396 1.07748 0.98661 0.87977 1.86608 1.38970 1.92686 1.17364 0.93877 0.75405 0.73410 0.88679 1.20888 0.92891 0.98861 0.97940 1.21379 1.01829 0.89564 1.05582 0.90444 0.90840 0.86622 0.74496 0.89642 0.89065 0.91907 0.90102 0.75602 0.92104 0.90105 0.89999 0.92821 0.81197 0.86792 0.76438 1.23388 1.18715 0.81717 0.80247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.64 10.50 -93.17 -0.98 -1.62 16 3 C 0.14 0.36 6.70 22.57 0.15 0.51 16 4 C 0.02 0.15 7.35 23.14 0.17 0.32 16 5 O -0.18 -1.45 10.28 -13.44 -0.14 -1.59 16 6 C -0.03 -0.28 7.07 24.00 0.17 -0.11 16 7 C 0.60 5.23 7.76 86.54 0.67 5.90 16 8 O -0.54 -8.19 16.49 -4.22 -0.07 -8.26 16 9 N -0.70 -1.59 5.07 -446.21 -2.26 -3.85 16 10 C 0.14 0.16 2.45 44.99 0.11 0.27 16 11 H 0.08 0.42 7.58 -2.39 -0.02 0.40 16 12 C -0.11 0.38 5.39 30.59 0.16 0.55 16 13 C -0.11 0.09 5.57 30.60 0.17 0.26 16 14 C 0.10 -0.09 3.47 30.59 0.11 0.01 16 15 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 16 O -0.59 -1.07 13.32 -148.98 -1.98 -3.05 16 17 C -0.14 0.06 5.55 30.59 0.17 0.23 16 18 C -0.12 -0.09 5.50 30.60 0.17 0.08 16 19 C -0.11 -0.95 10.68 23.79 0.25 -0.69 16 20 C -0.10 -0.60 6.16 -20.24 -0.12 -0.72 16 21 C -0.10 -0.12 5.26 -19.87 -0.10 -0.22 16 22 C -0.09 -0.02 2.70 71.23 0.19 0.17 16 23 O -0.55 -2.04 12.88 -148.98 -1.92 -3.96 16 24 Si 0.78 -3.05 30.25 68.60 2.08 -0.97 16 25 C -0.09 0.31 8.62 22.02 0.19 0.50 16 26 C -0.17 0.58 9.03 22.40 0.20 0.78 16 27 H 0.08 -0.83 7.66 -2.39 -0.02 -0.84 16 28 H 0.07 -0.75 7.66 -2.38 -0.02 -0.77 16 29 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 30 H 0.42 -0.71 8.32 -92.71 -0.77 -1.48 16 31 H 0.08 -0.34 8.14 -2.38 -0.02 -0.36 16 32 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 33 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 34 H 0.08 -0.09 8.14 -2.39 -0.02 -0.11 16 35 H 0.39 -2.33 9.08 -74.05 -0.67 -3.00 16 36 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 37 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 38 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 39 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 40 H 0.17 1.37 8.06 -2.91 -0.02 1.34 16 41 H 0.11 0.06 7.96 -2.39 -0.02 0.04 16 42 H 0.39 -1.08 8.70 -74.05 -0.64 -1.72 16 43 H -0.31 -1.43 7.11 99.48 0.71 -0.72 16 44 H -0.26 0.84 6.69 99.48 0.67 1.51 16 45 H 0.17 -1.43 4.81 -2.91 -0.01 -1.45 16 46 H 0.18 -1.89 6.26 -2.91 -0.02 -1.91 16 Total: 0.00 -22.91 379.17 -2.54 -25.45 By element: Atomic # 1 Polarization: -9.95 SS G_CDS: -1.04 Total: -10.99 kcal Atomic # 6 Polarization: 5.07 SS G_CDS: 3.77 Total: 8.84 kcal Atomic # 7 Polarization: -1.59 SS G_CDS: -2.26 Total: -3.85 kcal Atomic # 8 Polarization: -13.39 SS G_CDS: -5.09 Total: -18.48 kcal Atomic # 14 Polarization: -3.05 SS G_CDS: 2.08 Total: -0.97 kcal Total: -22.91 -2.54 -25.45 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.645 kcal (2) G-P(sol) polarization free energy of solvation -22.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.554 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.544 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.454 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.098 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds