Wall clock time and date at job start Sat Mar 6 2021 15:02:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33810 * 122.45271 * 2 1 4 4 C 1.50703 * 124.52117 * 0.04147 * 3 2 1 5 5 O 1.42894 * 109.47098 * 329.99739 * 4 3 2 6 6 Si 1.86303 * 109.46977 * 210.00078 * 4 3 2 7 7 S 1.70622 * 110.95627 * 180.02562 * 3 2 1 8 8 C 1.75832 * 91.56119 * 359.97438 * 7 3 2 9 9 C 1.46582 * 125.45664 * 179.97438 * 8 7 3 10 10 O 1.21699 * 120.00279 * 180.02562 * 9 8 7 11 11 N 1.34782 * 120.00089 * 0.02562 * 9 8 7 12 12 C 1.46499 * 120.00074 * 179.97438 * 11 9 8 13 13 H 1.09001 * 109.46813 * 35.00305 * 12 11 9 14 14 C 1.53000 * 109.46840 * 155.00031 * 12 11 9 15 15 C 1.52997 * 109.47060 * 180.02562 * 14 12 11 16 16 C 1.53006 * 109.47127 * 300.00449 * 15 14 12 17 17 H 1.09001 * 109.47002 * 299.99574 * 16 15 14 18 18 O 1.42900 * 109.46976 * 179.97438 * 16 15 14 19 19 C 1.52997 * 109.47164 * 59.99836 * 16 15 14 20 20 C 1.52996 * 109.47185 * 275.00149 * 12 11 9 21 21 C 1.36646 * 109.08233 * 0.26382 * 8 7 3 22 22 H 1.09000 * 109.46513 * 89.99799 * 1 2 3 23 23 H 1.08994 * 109.46960 * 210.00386 * 1 2 3 24 24 H 1.09003 * 109.46434 * 330.00427 * 1 2 3 25 25 H 1.08999 * 109.47080 * 90.00530 * 4 3 2 26 26 H 0.96698 * 113.99987 * 180.02562 * 5 4 3 27 27 H 1.48503 * 110.00275 * 59.99873 * 6 4 3 28 28 H 1.48505 * 110.00012 * 181.31787 * 6 4 3 29 29 H 0.97002 * 119.99499 * 0.02562 * 11 9 8 30 30 H 1.09002 * 109.47398 * 300.00326 * 14 12 11 31 31 H 1.09001 * 109.47194 * 60.00507 * 14 12 11 32 32 H 1.08998 * 109.47533 * 59.99948 * 15 14 12 33 33 H 1.08996 * 109.47853 * 180.02562 * 15 14 12 34 34 H 0.96708 * 114.00004 * 59.99909 * 18 16 15 35 35 H 1.09002 * 109.47045 * 180.02562 * 19 16 15 36 36 H 1.09001 * 109.47375 * 59.99966 * 19 16 15 37 37 H 1.08992 * 109.47554 * 299.99819 * 20 12 11 38 38 H 1.09004 * 109.47108 * 60.00069 * 20 12 11 39 39 H 1.08001 * 123.34656 * 179.73698 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1291 0.0000 4 6 1.6356 2.5161 0.0009 5 8 0.3751 2.4984 -0.6720 6 14 2.7921 3.6829 -0.8776 7 16 3.8971 0.7891 -0.0007 8 6 3.5937 -0.9429 -0.0002 9 6 4.6231 -1.9864 -0.0010 10 8 4.3001 -3.1598 -0.0011 11 7 5.9273 -1.6465 -0.0017 12 6 6.9561 -2.6895 -0.0020 13 1 6.6116 -3.5394 -0.5911 14 6 8.2447 -2.1346 -0.6124 15 6 9.3189 -3.2240 -0.6132 16 6 9.5884 -3.6757 0.8236 17 1 9.9331 -2.8260 1.4130 18 8 10.5913 -4.6936 0.8227 19 6 8.2998 -4.2306 1.4339 20 6 7.2254 -3.1405 1.4350 21 6 2.2446 -1.1601 -0.0055 22 1 -0.3632 0.0000 -1.0277 23 1 -0.3633 -0.8899 0.5139 24 1 -0.3632 0.8901 0.5138 25 1 1.4942 2.8501 1.0288 26 1 -0.0626 3.3598 -0.7099 27 1 2.9933 3.2385 -2.2802 28 1 2.2372 5.0602 -0.8559 29 1 6.1847 -0.7113 -0.0013 30 1 8.0528 -1.8132 -1.6361 31 1 8.5891 -1.2846 -0.0232 32 1 8.9743 -4.0737 -1.2025 33 1 10.2371 -2.8286 -1.0476 34 1 11.4375 -4.4118 0.4487 35 1 8.4917 -4.5520 2.4576 36 1 7.9551 -5.0802 0.8445 37 1 7.5698 -2.2907 2.0241 38 1 6.3073 -3.5359 1.8698 39 1 1.8019 -2.1452 -0.0105 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_6739946.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:52 Heat of formation + Delta-G solvation = -95.667480 kcal Electronic energy + Delta-G solvation = -21904.818570 eV Core-core repulsion = 18518.947740 eV Total energy + Delta-G solvation = -3385.870830 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.107 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.16212 -40.01480 -39.33241 -37.60699 -36.90323 -34.49670 -32.29471 -31.93899 -30.22254 -29.54016 -26.35109 -24.46661 -23.92045 -22.96443 -21.62710 -21.10070 -19.97429 -19.12949 -18.58895 -18.23569 -17.59670 -16.96733 -16.53810 -16.24233 -15.96569 -15.58431 -15.48588 -14.93301 -14.80977 -14.51919 -14.46947 -14.22671 -14.08187 -13.57546 -13.34368 -13.20019 -13.12339 -12.95523 -12.78869 -12.56053 -12.47170 -12.20037 -12.13519 -11.96964 -11.90786 -11.28471 -11.05649 -10.85986 -10.83755 -10.14011 -9.60817 -9.35287 -5.25569 -0.57339 0.28991 0.70986 1.01555 1.36279 1.46552 1.79972 2.01715 2.23417 3.06167 3.19650 3.50337 3.57619 3.59714 3.79352 3.97429 4.05304 4.11869 4.13004 4.25355 4.30976 4.31914 4.36643 4.43138 4.57409 4.61942 4.78592 4.85789 4.91035 4.91961 4.97347 5.03103 5.08184 5.13326 5.20365 5.29026 5.43266 5.44472 5.50760 6.23511 6.39096 6.68364 7.14304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C -0.089 4.089 3 C -0.196 4.196 4 C -0.033 4.033 5 O -0.524 6.524 6 Si 0.659 3.341 7 S 0.202 5.798 8 C -0.263 4.263 9 C 0.594 3.406 10 O -0.524 6.524 11 N -0.724 5.724 12 C 0.144 3.856 13 H 0.094 0.906 14 C -0.125 4.125 15 C -0.148 4.148 16 C 0.103 3.897 17 H 0.057 0.943 18 O -0.567 6.567 19 C -0.111 4.111 20 C -0.127 4.127 21 C -0.047 4.047 22 H 0.071 0.929 23 H 0.060 0.940 24 H 0.078 0.922 25 H 0.088 0.912 26 H 0.382 0.618 27 H -0.242 1.242 28 H -0.242 1.242 29 H 0.398 0.602 30 H 0.075 0.925 31 H 0.072 0.928 32 H 0.076 0.924 33 H 0.072 0.928 34 H 0.379 0.621 35 H 0.074 0.926 36 H 0.074 0.926 37 H 0.068 0.932 38 H 0.077 0.923 39 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.674 6.380 1.075 7.001 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.102 4.102 3 C -0.315 4.315 4 C -0.144 4.144 5 O -0.332 6.332 6 Si 0.556 3.444 7 S 0.470 5.530 8 C -0.383 4.383 9 C 0.381 3.619 10 O -0.401 6.401 11 N -0.375 5.375 12 C 0.040 3.960 13 H 0.112 0.888 14 C -0.163 4.163 15 C -0.187 4.187 16 C 0.044 3.956 17 H 0.075 0.925 18 O -0.373 6.373 19 C -0.149 4.149 20 C -0.166 4.166 21 C -0.080 4.080 22 H 0.090 0.910 23 H 0.079 0.921 24 H 0.096 0.904 25 H 0.105 0.895 26 H 0.230 0.770 27 H -0.166 1.166 28 H -0.165 1.165 29 H 0.232 0.768 30 H 0.094 0.906 31 H 0.091 0.909 32 H 0.094 0.906 33 H 0.091 0.909 34 H 0.226 0.774 35 H 0.093 0.907 36 H 0.092 0.908 37 H 0.087 0.913 38 H 0.095 0.905 39 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.548 6.029 0.603 7.022 hybrid contribution -1.960 0.371 -0.428 2.041 sum 1.587 6.400 0.174 6.597 Atomic orbital electron populations 1.20516 0.88676 1.02501 1.02788 1.18703 0.98544 0.90551 1.02393 1.23272 0.98332 0.98545 1.11375 1.24022 0.91470 0.97570 1.01373 1.86686 1.31705 1.35545 1.79263 0.95560 0.86051 0.78650 0.84112 1.82576 1.02216 0.98679 1.69542 1.24578 0.97958 0.96730 1.19017 1.16929 0.81588 0.87396 0.76025 1.90861 1.81551 1.18135 1.49546 1.45920 1.05321 1.10178 1.76128 1.21086 0.86782 0.90994 0.97121 0.88798 1.21758 0.93923 0.98743 1.01888 1.22220 0.99122 0.99204 0.98126 1.21864 0.88961 0.90038 0.94758 0.92548 1.86543 1.24545 1.40358 1.85844 1.21438 0.92707 0.98602 1.02146 1.21905 0.99403 0.98831 0.96442 1.20720 0.90944 1.00120 0.96241 0.90985 0.92097 0.90372 0.89470 0.76953 1.16588 1.16545 0.76762 0.90625 0.90941 0.90574 0.90945 0.77394 0.90686 0.90766 0.91319 0.90460 0.82717 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.08 8.70 36.01 0.31 0.23 16 2 C -0.09 -0.16 5.75 -106.45 -0.61 -0.78 16 3 C -0.20 -0.12 5.57 -35.86 -0.20 -0.32 16 4 C -0.03 0.04 2.75 36.01 0.10 0.14 16 5 O -0.52 0.39 9.81 -35.23 -0.35 0.04 16 6 Si 0.66 -1.17 31.31 -169.99 -5.32 -6.50 16 7 S 0.20 -0.18 19.80 -107.50 -2.13 -2.31 16 8 C -0.26 -0.51 6.45 -36.79 -0.24 -0.75 16 9 C 0.59 1.79 7.75 -12.89 -0.10 1.69 16 10 O -0.52 -3.48 16.50 5.19 0.09 -3.39 16 11 N -0.72 0.04 5.07 -55.15 -0.28 -0.24 16 12 C 0.14 -0.03 2.45 -67.93 -0.17 -0.19 16 13 H 0.09 0.18 7.58 -51.93 -0.39 -0.22 16 14 C -0.13 0.29 5.39 -26.73 -0.14 0.14 16 15 C -0.15 0.27 5.55 -26.73 -0.15 0.12 16 16 C 0.10 -0.07 3.47 -26.73 -0.09 -0.16 16 17 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 18 O -0.57 -0.40 13.32 -35.23 -0.47 -0.87 16 19 C -0.11 -0.04 5.57 -26.71 -0.15 -0.19 16 20 C -0.13 0.01 5.50 -26.71 -0.15 -0.14 16 21 C -0.05 -0.11 9.80 -40.44 -0.40 -0.51 16 22 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 23 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 24 H 0.08 0.05 6.41 -51.93 -0.33 -0.29 16 25 H 0.09 -0.26 7.96 -51.93 -0.41 -0.68 16 26 H 0.38 -1.78 8.74 45.56 0.40 -1.38 16 27 H -0.24 -0.42 7.11 56.52 0.40 -0.02 16 28 H -0.24 0.08 7.11 56.52 0.40 0.48 16 29 H 0.40 -1.00 7.72 -40.82 -0.31 -1.31 16 30 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 31 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 32 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 33 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.38 -1.26 9.08 45.56 0.41 -0.85 16 35 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 36 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 37 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 39 H 0.16 0.36 8.06 -52.49 -0.42 -0.06 16 LS Contribution 329.81 15.07 4.97 4.97 Total: 0.00 -8.04 329.81 -10.38 -18.42 By element: Atomic # 1 Polarization: -4.52 SS G_CDS: -4.91 Total: -9.43 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: -1.98 Total: -0.71 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.28 Total: -0.24 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.73 Total: -4.22 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.32 Total: -6.50 kcal Atomic # 16 Polarization: -0.18 SS G_CDS: -2.13 Total: -2.31 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -8.04 -10.38 -18.42 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_6739946.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.246 kcal (2) G-P(sol) polarization free energy of solvation -8.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.422 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.667 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds