Wall clock time and date at job start Sat Mar 6 2021 15:02:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.47273 * 2 1 4 4 C 1.50703 * 109.46951 * 119.99940 * 2 1 3 5 5 C 1.38230 * 119.93712 * 65.00271 * 4 2 1 6 6 C 1.38199 * 120.07359 * 180.02562 * 5 4 2 7 7 C 1.38671 * 119.95615 * 359.97438 * 6 5 4 8 8 O 1.35923 * 120.05958 * 179.97438 * 7 6 5 9 9 C 1.42904 * 116.99802 * 0.02562 * 8 7 6 10 10 C 1.53001 * 109.47003 * 179.97438 * 9 8 7 11 11 N 1.46502 * 109.47251 * 179.97438 * 10 9 8 12 12 C 1.34806 * 126.59580 * 124.71147 * 11 10 9 13 13 C 1.36593 * 106.84157 * 179.91028 * 12 11 10 14 14 C 1.47521 * 125.76981 * 180.13644 * 13 12 11 15 15 O 1.21596 * 120.00544 * 0.24171 * 14 13 12 16 16 N 1.34785 * 119.99834 * 180.23953 * 14 13 12 17 17 C 1.46497 * 119.99962 * 180.02562 * 16 14 13 18 18 H 1.08999 * 109.47464 * 34.99875 * 17 16 14 19 19 C 1.52995 * 109.47067 * 155.00117 * 17 16 14 20 20 C 1.53004 * 109.47090 * 180.02562 * 19 17 16 21 21 C 1.53000 * 109.46993 * 299.99787 * 20 19 17 22 22 H 1.09007 * 109.47160 * 300.00064 * 21 20 19 23 23 O 1.42896 * 109.46981 * 180.02562 * 21 20 19 24 24 C 1.52995 * 109.47028 * 60.00175 * 21 20 19 25 25 C 1.53000 * 109.47036 * 274.99915 * 17 16 14 26 26 N 1.34401 * 108.45799 * 0.35840 * 13 12 11 27 27 N 1.28761 * 109.52115 * 359.78238 * 26 13 12 28 28 C 1.38860 * 119.88184 * 359.97438 * 7 6 5 29 29 Cl 1.73599 * 120.03674 * 179.97438 * 28 7 6 30 30 C 1.38211 * 119.91893 * 0.27799 * 28 7 6 31 31 H 0.96703 * 113.99999 * 299.99999 * 1 2 3 32 32 H 1.09005 * 109.47175 * 239.99800 * 2 1 3 33 33 H 1.48504 * 110.00061 * 300.00138 * 3 2 1 34 34 H 1.48500 * 110.00031 * 61.31600 * 3 2 1 35 35 H 1.07996 * 119.96499 * 0.02562 * 5 4 2 36 36 H 1.07994 * 120.02438 * 179.97438 * 6 5 4 37 37 H 1.09002 * 109.47171 * 299.99595 * 9 8 7 38 38 H 1.09001 * 109.47417 * 60.00170 * 9 8 7 39 39 H 1.08994 * 109.47116 * 300.00165 * 10 9 8 40 40 H 1.09001 * 109.46764 * 59.99931 * 10 9 8 41 41 H 1.08009 * 126.57802 * 0.03886 * 12 11 10 42 42 H 0.96999 * 119.99984 * 359.97438 * 16 14 13 43 43 H 1.09003 * 109.47570 * 299.99782 * 19 17 16 44 44 H 1.08995 * 109.47604 * 59.99827 * 19 17 16 45 45 H 1.08995 * 109.47295 * 60.00213 * 20 19 17 46 46 H 1.08999 * 109.46995 * 180.02562 * 20 19 17 47 47 H 0.96706 * 113.99766 * 179.97438 * 23 21 20 48 48 H 1.08995 * 109.47604 * 59.99976 * 24 21 20 49 49 H 1.09002 * 109.47002 * 180.02562 * 24 21 20 50 50 H 1.08995 * 109.47448 * 300.00335 * 25 17 16 51 51 H 1.08999 * 109.47035 * 60.00290 * 25 17 16 52 52 H 1.08005 * 119.97518 * 179.69892 * 30 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6840 -2.0602 1.3971 6 6 2.1428 -2.7143 2.5246 7 6 2.8526 -2.0159 3.4897 8 8 3.3044 -2.6571 4.5998 9 6 3.0125 -4.0518 4.7073 10 6 3.5972 -4.5961 6.0122 11 7 3.2974 -6.0259 6.1228 12 6 4.1875 -7.0220 6.3039 13 6 3.4745 -8.1860 6.3516 14 6 4.0389 -9.5359 6.5399 15 8 5.2389 -9.6800 6.6735 16 7 3.2245 -10.6096 6.5639 17 6 3.7850 -11.9500 6.7515 18 1 4.6390 -11.8957 7.4266 19 6 2.7188 -12.8693 7.3508 20 6 3.3044 -14.2691 7.5472 21 6 3.7576 -14.8266 6.1964 22 1 2.9037 -14.8814 5.5210 23 8 4.3039 -16.1342 6.3798 24 6 4.8237 -13.9073 5.5971 25 6 4.2377 -12.5072 5.4004 26 7 2.1722 -7.8941 6.1930 27 7 2.0302 -6.6219 6.0544 28 6 3.1009 -0.6602 3.3200 29 17 3.9884 0.2182 4.5259 30 6 2.6352 -0.0099 2.1929 31 1 -0.3933 0.4417 0.7651 32 1 1.7923 -0.5139 -0.8900 33 1 1.5615 2.4679 -1.2085 34 1 1.5879 2.4586 1.2242 35 1 1.1315 -2.6041 0.6452 36 1 1.9488 -3.7688 2.6541 37 1 1.9324 -4.1983 4.7037 38 1 3.4538 -4.5816 3.8631 39 1 4.6772 -4.4496 6.0154 40 1 3.1562 -4.0664 6.8566 41 1 5.2587 -6.9190 6.3960 42 1 2.2672 -10.4946 6.4578 43 1 2.3962 -12.4725 8.3134 44 1 1.8648 -12.9238 6.6757 45 1 4.1581 -14.2144 8.2226 46 1 2.5447 -14.9241 7.9738 47 1 4.6120 -16.5499 5.5629 48 1 5.6775 -13.8525 6.2724 49 1 5.1462 -14.3042 4.6345 50 1 3.3838 -12.5616 4.7252 51 1 4.9973 -11.8523 4.9734 52 1 2.8236 1.0456 2.0623 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_7143556.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:02:57 Heat of formation + Delta-G solvation = -38.102538 kcal Electronic energy + Delta-G solvation = -36560.447189 eV Core-core repulsion = 31361.869321 eV Total energy + Delta-G solvation = -5198.577869 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.144 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -43.37879 -41.53653 -41.00298 -39.54819 -39.44661 -37.82416 -37.16646 -37.00077 -36.17181 -34.46920 -32.52930 -32.18274 -31.99380 -31.86391 -30.75393 -29.25916 -26.74728 -25.78595 -25.02774 -24.02169 -23.86372 -22.90654 -22.87706 -22.41630 -21.46412 -20.96765 -19.81629 -19.06010 -18.47115 -18.18897 -17.85787 -17.55558 -17.44981 -17.15588 -16.98211 -16.64328 -16.31074 -16.19856 -15.87110 -15.83851 -15.60461 -15.49933 -15.39604 -15.23731 -15.00789 -14.79803 -14.64378 -14.34748 -14.17882 -13.80900 -13.75299 -13.40336 -13.34660 -13.24411 -13.19817 -13.00511 -12.64047 -12.58929 -12.48833 -12.45211 -12.30367 -12.17491 -12.00207 -11.88882 -11.77903 -11.75091 -11.50552 -11.34679 -11.24949 -10.77088 -10.65777 -10.51990 -10.09494 -10.07813 -9.35787 -4.95642 -0.02477 0.00182 0.02444 0.51701 0.70617 1.07215 1.26868 1.55749 1.92244 1.94270 2.01927 2.15384 2.36016 3.06650 3.18851 3.29782 3.38843 3.46384 3.50671 3.58611 3.67591 3.71792 3.74605 3.76977 3.86288 3.95966 4.02525 4.03257 4.06134 4.12085 4.21748 4.27607 4.29966 4.36990 4.42412 4.44011 4.45122 4.47088 4.63961 4.64550 4.68795 4.76602 4.87949 4.96110 4.99649 5.02892 5.10202 5.12417 5.22932 5.24682 5.27258 5.31125 5.41764 5.44631 5.98782 6.34206 6.45404 6.78423 6.87838 7.06553 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.070 4.070 3 Si 0.749 3.251 4 C -0.139 4.139 5 C -0.048 4.048 6 C -0.194 4.194 7 C 0.138 3.862 8 O -0.304 6.304 9 C 0.047 3.953 10 C 0.123 3.877 11 N -0.350 5.350 12 C 0.119 3.881 13 C -0.123 4.123 14 C 0.607 3.393 15 O -0.566 6.566 16 N -0.704 5.704 17 C 0.145 3.855 18 H 0.074 0.926 19 C -0.115 4.115 20 C -0.111 4.111 21 C 0.102 3.898 22 H 0.068 0.932 23 O -0.589 6.589 24 C -0.143 4.143 25 C -0.122 4.122 26 N -0.215 5.215 27 N -0.083 5.083 28 C -0.077 4.077 29 Cl -0.058 7.058 30 C -0.075 4.075 31 H 0.387 0.613 32 H 0.134 0.866 33 H -0.299 1.299 34 H -0.282 1.282 35 H 0.147 0.853 36 H 0.153 0.847 37 H 0.079 0.921 38 H 0.083 0.917 39 H 0.151 0.849 40 H 0.122 0.878 41 H 0.238 0.762 42 H 0.416 0.584 43 H 0.082 0.918 44 H 0.088 0.912 45 H 0.062 0.938 46 H 0.077 0.923 47 H 0.394 0.606 48 H 0.061 0.939 49 H 0.079 0.921 50 H 0.078 0.922 51 H 0.056 0.944 52 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.199 0.587 -2.524 2.855 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.179 4.179 3 Si 0.654 3.346 4 C -0.140 4.140 5 C -0.066 4.066 6 C -0.213 4.213 7 C 0.092 3.908 8 O -0.217 6.217 9 C -0.029 4.029 10 C 0.003 3.997 11 N -0.136 5.136 12 C -0.038 4.038 13 C -0.263 4.263 14 C 0.392 3.608 15 O -0.444 6.444 16 N -0.354 5.354 17 C 0.041 3.959 18 H 0.092 0.908 19 C -0.153 4.153 20 C -0.149 4.149 21 C 0.044 3.956 22 H 0.086 0.914 23 O -0.397 6.397 24 C -0.182 4.182 25 C -0.160 4.160 26 N -0.089 5.089 27 N -0.063 5.063 28 C -0.104 4.104 29 Cl -0.029 7.029 30 C -0.093 4.093 31 H 0.236 0.764 32 H 0.151 0.849 33 H -0.227 1.227 34 H -0.208 1.208 35 H 0.165 0.835 36 H 0.171 0.829 37 H 0.098 0.902 38 H 0.101 0.899 39 H 0.169 0.831 40 H 0.140 0.860 41 H 0.254 0.746 42 H 0.252 0.748 43 H 0.101 0.899 44 H 0.106 0.894 45 H 0.081 0.919 46 H 0.096 0.904 47 H 0.244 0.756 48 H 0.079 0.921 49 H 0.098 0.902 50 H 0.097 0.903 51 H 0.075 0.925 52 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.466 1.580 -2.239 2.780 hybrid contribution -0.338 -0.159 0.079 0.382 sum 0.129 1.421 -2.160 2.589 Atomic orbital electron populations 1.86590 1.18282 1.80236 1.50254 1.25034 0.83470 1.11041 0.98382 0.94227 0.90614 0.72970 0.76745 1.20164 1.01556 0.94983 0.97316 1.21127 0.95416 0.93511 0.96519 1.21465 1.02849 1.01708 0.95257 1.18687 0.94702 0.90330 0.87094 1.85997 1.73686 1.23315 1.38669 1.22963 1.02105 0.79385 0.98440 1.21925 1.05728 0.73034 0.99013 1.50345 1.06084 1.08898 1.48238 1.23914 0.99497 0.85785 0.94638 1.21474 0.90005 0.95911 1.18894 1.16882 0.85451 0.82778 0.75730 1.90822 1.15300 1.86244 1.52055 1.45813 1.11446 1.05720 1.72381 1.21082 0.97174 0.80450 0.97229 0.90773 1.21702 0.97732 0.93327 1.02548 1.21415 1.01428 0.95541 0.96494 1.21904 0.94805 0.81865 0.97056 0.91373 1.86483 1.83312 1.31081 1.38852 1.22182 0.98966 0.95036 1.01994 1.21814 1.01316 0.95904 0.96993 1.74616 1.17014 1.07377 1.09873 1.81993 1.00951 1.00145 1.23260 1.20202 1.05209 0.90235 0.94762 1.98390 1.73988 1.75248 1.55239 1.20952 0.96454 1.00586 0.91291 0.76399 0.84878 1.22681 1.20843 0.83521 0.82928 0.90237 0.89884 0.83127 0.85950 0.74604 0.74762 0.89921 0.89356 0.91920 0.90429 0.75648 0.92069 0.90189 0.90305 0.92533 0.83108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.09 12.83 -148.98 -1.91 -1.82 16 2 C -0.07 0.24 2.80 71.24 0.20 0.44 16 3 Si 0.75 -2.36 29.88 68.60 2.05 -0.31 16 4 C -0.14 0.39 5.35 -19.85 -0.11 0.29 16 5 C -0.05 0.15 9.68 22.26 0.22 0.37 16 6 C -0.19 0.62 9.04 22.36 0.20 0.82 16 7 C 0.14 -0.12 6.68 22.52 0.15 0.03 16 8 O -0.30 0.82 9.60 -92.68 -0.89 -0.06 16 9 C 0.05 -0.34 4.94 71.98 0.36 0.02 16 10 C 0.12 -1.20 6.91 86.38 0.60 -0.60 16 11 N -0.35 1.41 3.69 -347.10 -1.28 0.13 16 12 C 0.12 -0.42 11.27 83.85 0.95 0.52 16 13 C -0.12 -0.26 6.99 40.81 0.29 0.02 16 14 C 0.61 2.73 7.78 86.69 0.67 3.41 16 15 O -0.57 -5.64 16.53 -4.02 -0.07 -5.71 16 16 N -0.70 -0.37 5.07 -445.71 -2.26 -2.63 16 17 C 0.14 -0.01 2.45 44.99 0.11 0.10 16 18 H 0.07 0.31 7.58 -2.39 -0.02 0.29 16 19 C -0.12 0.41 5.39 30.59 0.16 0.58 16 20 C -0.11 0.12 5.57 30.60 0.17 0.29 16 21 C 0.10 -0.14 3.47 30.59 0.11 -0.03 16 22 H 0.07 -0.25 8.14 -2.38 -0.02 -0.27 16 23 O -0.59 -0.85 13.32 -148.98 -1.98 -2.83 16 24 C -0.14 0.21 5.55 30.61 0.17 0.38 16 25 C -0.12 0.09 5.50 30.61 0.17 0.26 16 26 N -0.21 -0.86 12.04 -50.00 -0.60 -1.46 16 27 N -0.08 -0.22 13.65 37.02 0.51 0.29 16 28 C -0.08 -0.03 6.33 22.41 0.14 0.11 16 29 Cl -0.06 -0.09 28.51 -2.72 -0.08 -0.17 16 30 C -0.07 0.13 8.44 22.28 0.19 0.32 16 31 H 0.39 -2.03 8.70 -74.06 -0.64 -2.68 16 32 H 0.13 -0.76 7.96 -2.38 -0.02 -0.78 16 33 H -0.30 -1.38 7.11 99.48 0.71 -0.67 16 34 H -0.28 -0.25 7.00 99.48 0.70 0.45 16 35 H 0.15 -0.77 8.06 -2.91 -0.02 -0.79 16 36 H 0.15 -0.99 6.30 -2.91 -0.02 -1.00 16 37 H 0.08 -0.46 7.66 -2.39 -0.02 -0.48 16 38 H 0.08 -0.71 7.66 -2.39 -0.02 -0.72 16 39 H 0.15 -2.29 8.08 -2.39 -0.02 -2.31 16 40 H 0.12 -1.28 8.14 -2.39 -0.02 -1.30 16 41 H 0.24 -2.41 8.06 -2.91 -0.02 -2.43 16 42 H 0.42 -0.91 8.29 -92.71 -0.77 -1.68 16 43 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 44 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 45 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 46 H 0.08 -0.08 8.14 -2.39 -0.02 -0.09 16 47 H 0.39 -2.49 9.08 -74.05 -0.67 -3.16 16 48 H 0.06 0.09 8.14 -2.39 -0.02 0.08 16 49 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 50 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 51 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 52 H 0.15 -0.60 4.83 -2.91 -0.01 -0.61 16 Total: 0.00 -23.86 447.06 -2.83 -26.69 By element: Atomic # 1 Polarization: -18.36 SS G_CDS: -1.05 Total: -19.40 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: 4.74 Total: 7.31 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -3.64 Total: -3.68 kcal Atomic # 8 Polarization: -5.58 SS G_CDS: -4.85 Total: -10.43 kcal Atomic # 14 Polarization: -2.36 SS G_CDS: 2.05 Total: -0.31 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -0.08 Total: -0.17 kcal Total: -23.86 -2.83 -26.69 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_7143556.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.411 kcal (2) G-P(sol) polarization free energy of solvation -23.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.273 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.829 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.692 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds