Wall clock time and date at job start Sat Mar 6 2021 15:03:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46974 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00123 * 2 1 3 5 5 C 1.34241 * 126.49954 * 255.02901 * 4 2 1 6 6 N 1.36834 * 109.93455 * 179.97438 * 5 4 2 7 7 C 1.46502 * 125.05667 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.46954 * 265.01768 * 7 6 5 9 9 O 1.21279 * 119.99512 * 0.02562 * 8 7 6 10 10 N 1.34771 * 119.99903 * 180.02562 * 8 7 6 11 11 C 1.46502 * 120.00007 * 180.02562 * 10 8 7 12 12 H 1.08999 * 109.47378 * 34.99436 * 11 10 8 13 13 C 1.52997 * 109.47348 * 154.99945 * 11 10 8 14 14 C 1.52999 * 109.47049 * 179.97438 * 13 11 10 15 15 C 1.53000 * 109.47097 * 299.99925 * 14 13 11 16 16 H 1.09006 * 109.47052 * 300.00199 * 15 14 13 17 17 O 1.42905 * 109.47045 * 180.02562 * 15 14 13 18 18 C 1.52997 * 109.47110 * 60.00112 * 15 14 13 19 19 C 1.52999 * 109.47049 * 299.99917 * 18 15 14 20 20 C 1.37684 * 109.87757 * 359.97438 * 6 5 4 21 21 C 1.39081 * 133.51188 * 180.02562 * 20 6 5 22 22 C 1.37804 * 119.77441 * 179.31316 * 21 20 6 23 23 C 1.38786 * 120.66742 * 0.55449 * 22 21 20 24 24 C 1.36663 * 120.52793 * 359.63854 * 23 22 21 25 25 C 1.39594 * 119.76469 * 359.97438 * 24 23 22 26 26 H 0.96699 * 114.00604 * 59.99761 * 1 2 3 27 27 H 1.09002 * 109.46984 * 240.00143 * 2 1 3 28 28 H 1.48498 * 110.00005 * 60.00258 * 3 2 1 29 29 H 1.48501 * 110.00049 * 181.31921 * 3 2 1 30 30 H 1.07997 * 125.02984 * 359.97438 * 5 4 2 31 31 H 1.08995 * 109.47578 * 25.02352 * 7 6 5 32 32 H 1.09007 * 109.46799 * 145.02135 * 7 6 5 33 33 H 0.97000 * 120.00049 * 0.02562 * 10 8 7 34 34 H 1.09004 * 109.47019 * 299.99612 * 13 11 10 35 35 H 1.08992 * 109.47038 * 59.99746 * 13 11 10 36 36 H 1.09006 * 109.47332 * 59.99953 * 14 13 11 37 37 H 1.09001 * 109.47383 * 179.97438 * 14 13 11 38 38 H 0.96695 * 113.99616 * 180.02562 * 17 15 14 39 39 H 1.08999 * 109.47297 * 60.00423 * 18 15 14 40 40 H 1.09004 * 109.47019 * 180.02562 * 18 15 14 41 41 H 1.09000 * 109.47213 * 299.99657 * 19 18 15 42 42 H 1.09008 * 109.47010 * 180.02562 * 19 18 15 43 43 H 1.08004 * 120.11589 * 359.97438 * 21 20 6 44 44 H 1.08003 * 119.66403 * 180.19414 * 22 21 20 45 45 H 1.07994 * 119.73652 * 179.61527 * 23 22 21 46 46 H 1.07997 * 120.11822 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4604 -0.1376 2.3232 6 7 2.8021 -1.0990 3.2349 7 6 3.4068 -0.8403 4.5440 8 6 4.9052 -0.9626 4.4381 9 8 5.4173 -1.2381 3.3738 10 7 5.6759 -0.7656 5.5260 11 6 7.1325 -0.8839 5.4230 12 1 7.4585 -0.5210 4.4483 13 6 7.7910 -0.0503 6.5240 14 6 9.3122 -0.1744 6.4168 15 6 9.7168 -1.6413 6.5767 16 1 9.3904 -2.0040 7.5514 17 8 11.1376 -1.7571 6.4771 18 6 9.0582 -2.4749 5.4756 19 6 7.5370 -2.3508 5.5829 20 6 2.4930 -2.3456 2.7388 21 6 2.6273 -3.6360 3.2400 22 6 2.2004 -4.7097 2.4890 23 6 1.6472 -4.5182 1.2307 24 6 1.5094 -3.2592 0.7172 25 6 1.9278 -2.1565 1.4641 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 1.2085 29 1 3.5345 1.7704 -0.0321 30 1 2.5962 0.9248 2.4620 31 1 3.1466 0.1660 4.8720 32 1 3.0332 -1.5659 5.2665 33 1 5.2661 -0.5456 6.3773 34 1 7.5025 0.9946 6.4103 35 1 7.4650 -0.4133 7.4987 36 1 9.6386 0.1883 5.4420 37 1 9.7814 0.4198 7.2009 38 1 11.4658 -2.6620 6.5690 39 1 9.3846 -2.1122 4.5009 40 1 9.3461 -3.5200 5.5898 41 1 7.2107 -2.7136 6.5576 42 1 7.0678 -2.9451 4.7987 43 1 3.0549 -3.7953 4.2189 44 1 2.3027 -5.7107 2.8813 45 1 1.3233 -5.3708 0.6525 46 1 1.0777 -3.1177 -0.2625 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:03:07 Heat of formation + Delta-G solvation = -52.256153 kcal Electronic energy + Delta-G solvation = -28527.444334 eV Core-core repulsion = 24576.887904 eV Total energy + Delta-G solvation = -3950.556430 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.50433 -41.13745 -39.66136 -37.97252 -37.55804 -37.02371 -34.69049 -34.06901 -32.04321 -31.49331 -30.21052 -29.93273 -28.44869 -25.65646 -24.04739 -23.83105 -23.32935 -22.42234 -21.68422 -21.09872 -20.44515 -18.67663 -18.29631 -18.26620 -18.18207 -17.69148 -17.18274 -16.58469 -16.35398 -16.12670 -15.67416 -15.56068 -15.40937 -15.04599 -14.84486 -14.77017 -14.60341 -14.48856 -14.26222 -14.02185 -13.52220 -13.50296 -13.46916 -13.39767 -13.10967 -12.64858 -12.57088 -12.47139 -12.34442 -12.32975 -11.91366 -11.89788 -11.65594 -11.44576 -11.13014 -10.88530 -10.44075 -10.26638 -10.10943 -9.03876 -8.54832 -4.95951 0.25931 0.78320 1.35677 1.37122 1.41043 1.59597 1.75720 2.04276 2.07511 3.05521 3.10859 3.37643 3.43161 3.49159 3.55011 3.66446 3.74616 3.79178 3.83134 3.85757 3.97007 4.03519 4.09396 4.12055 4.23751 4.26959 4.30882 4.35573 4.46229 4.48204 4.67622 4.69442 4.77018 4.79403 4.85654 4.89146 4.93353 4.97343 4.97942 5.08868 5.16266 5.24016 5.29279 5.63050 5.78658 5.84231 5.87948 6.11955 6.28233 6.35348 6.60789 6.80328 6.97271 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.032 4.032 3 Si 0.681 3.319 4 C -0.150 4.150 5 C 0.064 3.936 6 N -0.465 5.465 7 C 0.091 3.909 8 C 0.491 3.509 9 O -0.512 6.512 10 N -0.726 5.726 11 C 0.144 3.856 12 H 0.091 0.909 13 C -0.123 4.123 14 C -0.110 4.110 15 C 0.103 3.897 16 H 0.056 0.944 17 O -0.567 6.567 18 C -0.150 4.150 19 C -0.126 4.126 20 C 0.110 3.890 21 C -0.127 4.127 22 C -0.096 4.096 23 C -0.145 4.145 24 C -0.063 4.063 25 C -0.086 4.086 26 H 0.378 0.622 27 H 0.070 0.930 28 H -0.254 1.254 29 H -0.256 1.256 30 H 0.162 0.838 31 H 0.121 0.879 32 H 0.120 0.880 33 H 0.402 0.598 34 H 0.077 0.923 35 H 0.072 0.928 36 H 0.074 0.926 37 H 0.078 0.922 38 H 0.380 0.620 39 H 0.074 0.926 40 H 0.070 0.930 41 H 0.067 0.933 42 H 0.071 0.929 43 H 0.115 0.885 44 H 0.126 0.874 45 H 0.124 0.876 46 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.099 1.350 2.975 3.447 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.144 4.144 3 Si 0.582 3.418 4 C -0.157 4.157 5 C -0.061 4.061 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.275 3.725 9 O -0.386 6.386 10 N -0.378 5.378 11 C 0.039 3.961 12 H 0.109 0.891 13 C -0.161 4.161 14 C -0.148 4.148 15 C 0.044 3.956 16 H 0.074 0.926 17 O -0.373 6.373 18 C -0.188 4.188 19 C -0.165 4.165 20 C 0.005 3.995 21 C -0.148 4.148 22 C -0.115 4.115 23 C -0.164 4.164 24 C -0.082 4.082 25 C -0.090 4.090 26 H 0.225 0.775 27 H 0.088 0.912 28 H -0.179 1.179 29 H -0.180 1.180 30 H 0.179 0.821 31 H 0.139 0.861 32 H 0.138 0.862 33 H 0.236 0.764 34 H 0.096 0.904 35 H 0.091 0.909 36 H 0.093 0.907 37 H 0.096 0.904 38 H 0.228 0.772 39 H 0.093 0.907 40 H 0.089 0.911 41 H 0.085 0.915 42 H 0.090 0.910 43 H 0.133 0.867 44 H 0.144 0.856 45 H 0.142 0.858 46 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -0.063 2.175 3.381 4.020 hybrid contribution 0.007 -1.049 0.842 1.345 sum -0.056 1.126 4.222 4.370 Atomic orbital electron populations 1.86537 1.17675 1.81724 1.49317 1.23940 0.85120 1.09074 0.96234 0.95355 0.81004 0.77698 0.87705 1.19538 1.08681 0.91745 0.95751 1.21412 1.01770 0.93622 0.89247 1.43169 1.52662 1.04652 1.14391 1.21608 0.90815 1.05879 0.85222 1.21019 0.89483 0.77493 0.84507 1.90814 1.74543 1.45455 1.27776 1.46030 1.07282 1.72507 1.12009 1.21075 0.78606 0.95665 1.00721 0.89104 1.21762 0.95145 1.00646 0.98548 1.21405 0.94250 0.95304 1.03879 1.21839 0.80786 0.95919 0.97008 0.92578 1.86520 1.21042 1.33614 1.96155 1.22237 0.95185 1.00736 1.00671 1.21852 0.95656 0.96316 1.02676 1.18161 1.01157 0.85811 0.94324 1.19949 1.05003 0.89162 1.00678 1.20831 0.98205 0.97913 0.94550 1.20670 1.02469 0.96904 0.96402 1.20285 0.97863 0.90842 0.99161 1.18931 1.03360 0.92605 0.94077 0.77504 0.91167 1.17894 1.18021 0.82094 0.86068 0.86244 0.76382 0.90391 0.90896 0.90723 0.90376 0.77230 0.90708 0.91147 0.91475 0.90992 0.86719 0.85639 0.85791 0.85861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.96 12.86 -35.23 -0.45 -1.41 16 2 C -0.03 -0.06 3.05 36.01 0.11 0.05 16 3 Si 0.68 0.07 30.79 -169.99 -5.23 -5.16 16 4 C -0.15 -0.72 5.61 -102.71 -0.58 -1.30 16 5 C 0.06 0.25 9.89 -16.73 -0.17 0.09 16 6 N -0.47 -1.52 2.27 -115.70 -0.26 -1.78 16 7 C 0.09 -0.09 6.48 -5.19 -0.03 -0.12 16 8 C 0.49 0.52 7.86 -10.99 -0.09 0.43 16 9 O -0.51 -3.16 16.09 5.56 0.09 -3.07 16 10 N -0.73 1.42 5.08 -53.81 -0.27 1.15 16 11 C 0.14 -0.12 2.46 -67.93 -0.17 -0.29 16 12 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 13 C -0.12 0.31 5.39 -26.73 -0.14 0.17 16 14 C -0.11 0.10 5.57 -26.73 -0.15 -0.05 16 15 C 0.10 -0.08 3.47 -26.73 -0.09 -0.17 16 16 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 17 O -0.57 -0.40 13.32 -35.23 -0.47 -0.87 16 18 C -0.15 0.10 5.55 -26.73 -0.15 -0.04 16 19 C -0.13 0.08 5.49 -26.73 -0.15 -0.06 16 20 C 0.11 0.53 6.80 -83.99 -0.57 -0.04 16 21 C -0.13 -0.43 10.00 -39.43 -0.39 -0.83 16 22 C -0.10 -0.26 10.01 -39.54 -0.40 -0.66 16 23 C -0.15 -0.44 9.97 -39.95 -0.40 -0.84 16 24 C -0.06 -0.27 10.05 -39.65 -0.40 -0.67 16 25 C -0.09 -0.49 6.35 -105.14 -0.67 -1.15 16 26 H 0.38 -1.34 8.74 45.56 0.40 -0.94 16 27 H 0.07 0.06 7.96 -51.93 -0.41 -0.35 16 28 H -0.25 -0.58 7.04 56.52 0.40 -0.18 16 29 H -0.26 -0.84 7.11 56.52 0.40 -0.43 16 30 H 0.16 0.32 6.30 -52.49 -0.33 -0.01 16 31 H 0.12 -0.48 8.12 -51.93 -0.42 -0.90 16 32 H 0.12 -0.41 8.14 -51.92 -0.42 -0.83 16 33 H 0.40 -2.09 8.60 -40.82 -0.35 -2.44 16 34 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 35 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 36 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 38 H 0.38 -1.17 9.08 45.56 0.41 -0.76 16 39 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 40 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 42 H 0.07 0.12 8.14 -51.92 -0.42 -0.31 16 43 H 0.11 0.15 8.06 -52.48 -0.42 -0.27 16 44 H 0.13 0.04 8.06 -52.48 -0.42 -0.38 16 45 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 46 H 0.12 0.34 8.06 -52.49 -0.42 -0.08 16 LS Contribution 378.59 15.07 5.71 5.71 Total: 0.00 -11.99 378.59 -11.54 -23.53 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -6.22 Total: -12.61 kcal Atomic # 6 Polarization: -1.06 SS G_CDS: -4.43 Total: -5.48 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.54 Total: -0.63 kcal Atomic # 8 Polarization: -4.52 SS G_CDS: -0.83 Total: -5.35 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.23 Total: -5.16 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -11.99 -11.54 -23.53 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.722 kcal (2) G-P(sol) polarization free energy of solvation -11.993 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.715 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.541 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.534 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.256 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds