Wall clock time and date at job start Sat Mar 6 2021 16:09:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86295 * 109.47031 * 2 1 4 4 C 1.50699 * 109.46846 * 240.00088 * 2 1 3 5 5 C 1.35465 * 126.06276 * 119.97717 * 4 2 1 6 6 N 1.35542 * 108.87344 * 180.02562 * 5 4 2 7 7 C 1.37651 * 108.64352 * 0.02562 * 6 5 4 8 8 C 1.46627 * 126.23703 * 179.97438 * 7 6 5 9 9 O 1.21694 * 120.00219 * 180.02562 * 8 7 6 10 10 N 1.34778 * 119.99836 * 0.02562 * 8 7 6 11 11 C 1.39170 * 120.00058 * 185.27706 * 10 8 7 12 12 C 1.40289 * 120.16666 * 214.97001 * 11 10 8 13 13 C 1.47504 * 120.20691 * 359.95495 * 12 11 10 14 14 O 1.21598 * 119.99432 * 355.05236 * 13 12 11 15 15 N 1.34771 * 120.00234 * 175.05198 * 13 12 11 16 16 C 1.46502 * 119.99811 * 180.02562 * 15 13 12 17 17 H 1.09002 * 109.47374 * 324.99799 * 16 15 13 18 18 C 1.53002 * 109.47432 * 85.00081 * 16 15 13 19 19 C 1.52994 * 109.47185 * 180.02562 * 18 16 15 20 20 C 1.52998 * 109.47441 * 299.99782 * 19 18 16 21 21 H 1.09002 * 109.46775 * 300.00454 * 20 19 18 22 22 O 1.42896 * 109.47454 * 180.02562 * 20 19 18 23 23 C 1.53002 * 109.47079 * 59.99758 * 20 19 18 24 24 C 1.52998 * 109.47521 * 300.00401 * 23 20 19 25 25 C 1.39693 * 119.59863 * 180.23323 * 12 11 10 26 26 C 1.37799 * 119.91843 * 359.46743 * 25 12 11 27 27 C 1.38578 * 120.33744 * 0.55601 * 26 25 12 28 28 C 1.38005 * 120.40644 * 359.70078 * 27 26 25 29 29 C 1.37912 * 107.52976 * 0.26146 * 7 6 5 30 30 H 0.96700 * 114.00309 * 59.99920 * 1 2 3 31 31 H 1.08994 * 109.46960 * 120.00028 * 2 1 3 32 32 H 1.48496 * 110.00264 * 298.68133 * 3 2 1 33 33 H 1.48506 * 110.00174 * 60.00358 * 3 2 1 34 34 H 1.07999 * 125.56676 * 0.06873 * 5 4 2 35 35 H 0.97003 * 125.67677 * 180.02562 * 6 5 4 36 36 H 0.97002 * 119.99908 * 5.28652 * 10 8 7 37 37 H 0.96998 * 120.00257 * 0.02562 * 15 13 12 38 38 H 1.09006 * 109.46713 * 300.00093 * 18 16 15 39 39 H 1.09002 * 109.47071 * 59.99533 * 18 16 15 40 40 H 1.09003 * 109.47268 * 179.97438 * 19 18 16 41 41 H 1.09002 * 109.47507 * 59.99788 * 19 18 16 42 42 H 0.96703 * 113.99950 * 60.00003 * 22 20 19 43 43 H 1.09002 * 109.46749 * 60.00680 * 23 20 19 44 44 H 1.08993 * 109.47229 * 180.02562 * 23 20 19 45 45 H 1.08993 * 109.47557 * 179.97438 * 24 23 20 46 46 H 1.09002 * 109.47337 * 299.99919 * 24 23 20 47 47 H 1.07999 * 120.04191 * 179.74738 * 25 12 11 48 48 H 1.08000 * 119.82742 * 180.27890 * 26 25 12 49 49 H 1.07990 * 119.79117 * 179.72075 * 27 26 25 50 50 H 1.07999 * 119.96056 * 180.02562 * 28 27 26 51 51 H 1.07998 * 126.45824 * 179.74146 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7129 -0.1736 -2.1980 6 7 2.9553 -1.1177 -3.1398 7 6 2.3179 -2.2808 -2.7713 8 6 2.3241 -3.5452 -3.5137 9 8 1.7180 -4.5078 -3.0811 10 7 3.0011 -3.6414 -4.6751 11 6 2.9180 -4.8046 -5.4347 12 6 4.0335 -5.2575 -6.1549 13 6 5.3005 -4.5034 -6.1122 14 8 5.3554 -3.4397 -5.5256 15 7 6.3972 -4.9934 -6.7234 16 6 7.6557 -4.2446 -6.6805 17 1 7.4438 -3.1758 -6.7105 18 6 8.4050 -4.5800 -5.3893 19 6 9.7189 -3.7975 -5.3443 20 6 10.5818 -4.1798 -6.5485 21 1 10.7940 -5.2486 -6.5187 22 8 11.8093 -3.4495 -6.5061 23 6 9.8325 -3.8446 -7.8397 24 6 8.5185 -4.6270 -7.8848 25 6 3.9354 -6.4238 -6.9174 26 6 2.7505 -7.1267 -6.9490 27 6 1.6504 -6.6764 -6.2368 28 6 1.7304 -5.5230 -5.4832 29 6 1.6670 -2.0382 -1.5799 30 1 -0.3934 0.4417 -0.7650 31 1 1.7923 -0.5138 0.8899 32 1 1.5879 2.4585 -1.2242 33 1 1.5615 2.4679 1.2086 34 1 3.0832 0.8407 -2.2156 35 1 3.4891 -0.9943 -3.9403 36 1 3.5464 -2.9000 -4.9815 37 1 6.3533 -5.8417 -7.1916 38 1 7.7904 -4.3072 -4.5313 39 1 8.6168 -5.6488 -5.3593 40 1 10.2525 -4.0361 -4.4242 41 1 9.5067 -2.7288 -5.3741 42 1 12.3375 -3.6138 -5.7130 43 1 9.6203 -2.7758 -7.8695 44 1 10.4470 -4.1173 -8.6976 45 1 7.9846 -4.3878 -8.8044 46 1 8.7308 -5.6957 -7.8550 47 1 4.7884 -6.7767 -7.4778 48 1 2.6777 -8.0307 -7.5354 49 1 0.7248 -7.2317 -6.2714 50 1 0.8687 -5.1789 -4.9307 51 1 1.0686 -2.7421 -1.0206 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11560734_10543058.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:09:40 Heat of formation + Delta-G solvation = -74.967762 kcal Electronic energy + Delta-G solvation = -35654.030266 eV Core-core repulsion = 30906.390983 eV Total energy + Delta-G solvation = -4747.639283 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -42.61146 -41.84103 -40.76829 -39.71837 -38.93697 -37.72741 -37.13874 -35.91320 -34.63062 -32.66087 -32.36799 -32.03157 -31.38100 -30.16619 -29.34636 -26.59245 -25.24462 -24.83793 -24.03359 -23.47146 -22.65663 -21.83716 -21.19214 -21.11328 -20.69032 -19.98258 -19.14025 -18.33703 -18.25655 -17.62346 -17.46017 -17.05778 -16.78676 -16.48941 -16.23233 -16.09087 -15.84197 -15.76635 -15.61173 -15.43198 -15.40980 -14.90981 -14.75990 -14.68782 -14.50910 -14.31777 -14.23424 -13.78691 -13.69807 -13.49074 -13.43524 -13.40126 -13.22477 -13.07173 -12.68388 -12.56462 -12.37685 -12.33242 -11.90147 -11.78809 -11.60973 -11.43928 -11.25534 -10.94317 -10.83571 -10.49469 -10.33149 -10.03679 -9.93510 -9.43939 -9.15779 -4.93102 -0.33637 0.11232 0.53957 1.33189 1.56656 1.62875 1.73111 1.88738 1.91496 2.03032 2.04275 2.29726 2.78925 3.07684 3.39618 3.51848 3.53470 3.55474 3.63593 3.68998 3.86588 3.90693 3.95424 3.96781 4.04201 4.04334 4.12566 4.19472 4.25280 4.26921 4.28631 4.36194 4.40993 4.50250 4.68194 4.71900 4.76132 4.80202 4.87426 4.90497 4.94198 4.96770 5.00825 5.07108 5.10332 5.12959 5.17678 5.30796 5.32931 5.41280 5.59820 5.79179 5.83931 6.19259 6.26976 6.41091 6.56738 6.60603 6.94519 7.06355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.039 4.039 3 Si 0.682 3.318 4 C -0.211 4.211 5 C 0.041 3.959 6 N -0.531 5.531 7 C -0.060 4.060 8 C 0.590 3.410 9 O -0.509 6.509 10 N -0.664 5.664 11 C 0.215 3.785 12 C -0.177 4.177 13 C 0.572 3.428 14 O -0.549 6.549 15 N -0.719 5.719 16 C 0.144 3.856 17 H 0.093 0.907 18 C -0.127 4.127 19 C -0.149 4.149 20 C 0.103 3.897 21 H 0.056 0.944 22 O -0.568 6.568 23 C -0.109 4.109 24 C -0.125 4.125 25 C -0.066 4.066 26 C -0.142 4.142 27 C -0.067 4.067 28 C -0.132 4.132 29 C -0.070 4.070 30 H 0.374 0.626 31 H 0.116 0.884 32 H -0.260 1.260 33 H -0.258 1.258 34 H 0.177 0.823 35 H 0.421 0.579 36 H 0.419 0.581 37 H 0.402 0.598 38 H 0.072 0.928 39 H 0.067 0.933 40 H 0.069 0.931 41 H 0.074 0.926 42 H 0.380 0.620 43 H 0.074 0.926 44 H 0.077 0.923 45 H 0.078 0.922 46 H 0.072 0.928 47 H 0.130 0.870 48 H 0.133 0.867 49 H 0.134 0.866 50 H 0.142 0.858 51 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.558 -0.888 -4.692 6.602 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.150 4.150 3 Si 0.583 3.417 4 C -0.218 4.218 5 C -0.096 4.096 6 N -0.127 5.127 7 C -0.172 4.172 8 C 0.380 3.620 9 O -0.383 6.383 10 N -0.314 5.314 11 C 0.118 3.882 12 C -0.182 4.182 13 C 0.362 3.638 14 O -0.429 6.429 15 N -0.369 5.369 16 C 0.039 3.961 17 H 0.111 0.889 18 C -0.166 4.166 19 C -0.187 4.187 20 C 0.044 3.956 21 H 0.074 0.926 22 O -0.374 6.374 23 C -0.147 4.147 24 C -0.163 4.163 25 C -0.085 4.085 26 C -0.161 4.161 27 C -0.085 4.085 28 C -0.152 4.152 29 C -0.096 4.096 30 H 0.222 0.778 31 H 0.133 0.867 32 H -0.185 1.185 33 H -0.183 1.183 34 H 0.194 0.806 35 H 0.259 0.741 36 H 0.262 0.738 37 H 0.238 0.762 38 H 0.091 0.909 39 H 0.085 0.915 40 H 0.088 0.912 41 H 0.093 0.907 42 H 0.228 0.772 43 H 0.093 0.907 44 H 0.096 0.904 45 H 0.097 0.903 46 H 0.091 0.909 47 H 0.147 0.853 48 H 0.151 0.849 49 H 0.152 0.848 50 H 0.160 0.840 51 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 3.927 -0.013 -4.115 5.688 hybrid contribution -0.305 -0.487 -0.720 0.922 sum 3.622 -0.501 -4.836 6.062 Atomic orbital electron populations 1.86602 1.18038 1.79856 1.49125 1.24320 0.83368 1.09933 0.97366 0.95422 0.91311 0.74542 0.80433 1.19839 1.06527 0.95820 0.99588 1.21916 1.02303 0.95023 0.90360 1.41984 1.40291 1.09577 1.20876 1.20171 1.08959 0.87213 1.00854 1.17184 0.78539 0.86648 0.79599 1.90882 1.43044 1.36835 1.67557 1.43659 1.49127 1.17225 1.21343 1.17577 0.92250 0.87358 0.91057 1.19663 0.92846 0.98959 1.06771 1.18072 0.83274 0.84692 0.77806 1.90551 1.85002 1.23147 1.44184 1.45924 1.09945 1.25364 1.55700 1.21089 0.82366 0.97572 0.95024 0.88890 1.21867 0.96050 1.00581 0.98104 1.22230 0.96167 1.01589 0.98745 1.21846 0.84091 0.94765 0.94922 0.92593 1.86516 1.33300 1.70395 1.47155 1.21395 0.94824 1.01365 0.97152 1.21779 0.95538 1.01082 0.97866 1.21103 0.98323 0.92622 0.96431 1.21122 0.92958 1.00900 1.01127 1.21317 0.98983 0.94723 0.93523 1.21228 0.96806 0.96670 1.00496 1.21216 0.99036 0.95788 0.93597 0.77838 0.86660 1.18464 1.18285 0.80597 0.74061 0.73787 0.76244 0.90911 0.91470 0.91191 0.90717 0.77233 0.90709 0.90413 0.90304 0.90913 0.85268 0.84916 0.84769 0.83983 0.83036 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.13 12.88 -35.23 -0.45 -1.59 16 2 C -0.04 -0.01 3.02 36.01 0.11 0.09 16 3 Si 0.68 -0.80 30.59 -169.99 -5.20 -5.99 16 4 C -0.21 -0.17 5.44 -105.02 -0.57 -0.74 16 5 C 0.04 -0.04 10.45 -16.90 -0.18 -0.22 16 6 N -0.53 0.31 5.99 -9.39 -0.06 0.25 16 7 C -0.06 -0.14 7.05 -81.99 -0.58 -0.72 16 8 C 0.59 2.31 7.50 -12.88 -0.10 2.22 16 9 O -0.51 -3.41 14.67 5.19 0.08 -3.34 16 10 N -0.66 -1.55 4.68 -10.89 -0.05 -1.60 16 11 C 0.22 0.53 6.25 -83.52 -0.52 0.01 16 12 C -0.18 -0.16 5.89 -104.81 -0.62 -0.78 16 13 C 0.57 0.53 7.72 -12.49 -0.10 0.44 16 14 O -0.55 -1.55 13.55 5.28 0.07 -1.47 16 15 N -0.72 1.27 5.03 -54.85 -0.28 1.00 16 16 C 0.14 -0.24 2.45 -67.92 -0.17 -0.41 16 17 H 0.09 -0.01 7.58 -51.93 -0.39 -0.40 16 18 C -0.13 0.16 5.49 -26.73 -0.15 0.02 16 19 C -0.15 0.24 5.54 -26.74 -0.15 0.09 16 20 C 0.10 -0.14 3.47 -26.73 -0.09 -0.23 16 21 H 0.06 -0.11 8.14 -51.93 -0.42 -0.54 16 22 O -0.57 -0.03 13.32 -35.23 -0.47 -0.50 16 23 C -0.11 0.18 5.57 -26.73 -0.15 0.03 16 24 C -0.12 0.39 5.39 -26.73 -0.14 0.24 16 25 C -0.07 0.09 9.52 -39.20 -0.37 -0.28 16 26 C -0.14 0.18 10.02 -39.62 -0.40 -0.21 16 27 C -0.07 0.00 10.03 -39.54 -0.40 -0.40 16 28 C -0.13 -0.29 8.63 -39.43 -0.34 -0.63 16 29 C -0.07 -0.20 10.59 -39.11 -0.41 -0.61 16 30 H 0.37 -0.29 8.70 45.56 0.40 0.11 16 31 H 0.12 0.01 7.96 -51.93 -0.41 -0.40 16 32 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 33 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 34 H 0.18 -0.73 6.19 -52.49 -0.32 -1.05 16 35 H 0.42 -1.17 8.20 -40.82 -0.33 -1.51 16 36 H 0.42 0.51 5.45 -40.82 -0.22 0.28 16 37 H 0.40 -1.64 6.66 -40.82 -0.27 -1.91 16 38 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 39 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 40 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.38 -1.39 9.08 45.56 0.41 -0.98 16 43 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 46 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 47 H 0.13 -0.58 6.44 -52.49 -0.34 -0.91 16 48 H 0.13 -0.47 8.06 -52.49 -0.42 -0.89 16 49 H 0.13 -0.26 8.06 -52.49 -0.42 -0.69 16 50 H 0.14 0.44 6.53 -52.49 -0.34 0.10 16 51 H 0.15 0.53 8.06 -52.49 -0.42 0.10 16 LS Contribution 415.20 15.07 6.26 6.26 Total: 0.00 -10.58 415.20 -11.52 -22.10 By element: Atomic # 1 Polarization: -6.92 SS G_CDS: -6.10 Total: -13.02 kcal Atomic # 6 Polarization: 3.22 SS G_CDS: -5.32 Total: -2.10 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.38 Total: -0.35 kcal Atomic # 8 Polarization: -6.12 SS G_CDS: -0.78 Total: -6.89 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.20 Total: -5.99 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -10.58 -11.52 -22.10 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_10543058.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.863 kcal (2) G-P(sol) polarization free energy of solvation -10.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.447 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.104 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.968 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds