Wall clock time and date at job start Sat Mar 6 2021 16:09:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86295 * 109.47031 * 2 1 4 4 C 1.50699 * 109.46846 * 240.00088 * 2 1 3 5 5 C 1.35465 * 126.06276 * 119.97717 * 4 2 1 6 6 N 1.35542 * 108.87344 * 180.02562 * 5 4 2 7 7 C 1.37651 * 108.64352 * 0.02562 * 6 5 4 8 8 C 1.46627 * 126.23703 * 179.97438 * 7 6 5 9 9 O 1.21694 * 120.00219 * 180.02562 * 8 7 6 10 10 N 1.34778 * 119.99836 * 0.02562 * 8 7 6 11 11 C 1.39170 * 120.00058 * 185.27706 * 10 8 7 12 12 C 1.40289 * 120.16666 * 214.97001 * 11 10 8 13 13 C 1.47504 * 120.20691 * 359.95495 * 12 11 10 14 14 O 1.21598 * 119.99432 * 355.05236 * 13 12 11 15 15 N 1.34771 * 120.00234 * 175.05198 * 13 12 11 16 16 C 1.46502 * 119.99811 * 180.02562 * 15 13 12 17 17 H 1.09002 * 109.47374 * 324.99799 * 16 15 13 18 18 C 1.53002 * 109.47432 * 85.00081 * 16 15 13 19 19 C 1.52994 * 109.47185 * 180.02562 * 18 16 15 20 20 C 1.52998 * 109.47441 * 299.99782 * 19 18 16 21 21 H 1.09002 * 109.46775 * 300.00454 * 20 19 18 22 22 O 1.42896 * 109.47454 * 180.02562 * 20 19 18 23 23 C 1.53002 * 109.47079 * 59.99758 * 20 19 18 24 24 C 1.52998 * 109.47521 * 300.00401 * 23 20 19 25 25 C 1.39693 * 119.59863 * 180.23323 * 12 11 10 26 26 C 1.37799 * 119.91843 * 359.46743 * 25 12 11 27 27 C 1.38578 * 120.33744 * 0.55601 * 26 25 12 28 28 C 1.38005 * 120.40644 * 359.70078 * 27 26 25 29 29 C 1.37912 * 107.52976 * 0.26146 * 7 6 5 30 30 H 0.96700 * 114.00309 * 59.99920 * 1 2 3 31 31 H 1.08994 * 109.46960 * 120.00028 * 2 1 3 32 32 H 1.48496 * 110.00264 * 298.68133 * 3 2 1 33 33 H 1.48506 * 110.00174 * 60.00358 * 3 2 1 34 34 H 1.07999 * 125.56676 * 0.06873 * 5 4 2 35 35 H 0.97003 * 125.67677 * 180.02562 * 6 5 4 36 36 H 0.97002 * 119.99908 * 5.28652 * 10 8 7 37 37 H 0.96998 * 120.00257 * 0.02562 * 15 13 12 38 38 H 1.09006 * 109.46713 * 300.00093 * 18 16 15 39 39 H 1.09002 * 109.47071 * 59.99533 * 18 16 15 40 40 H 1.09003 * 109.47268 * 179.97438 * 19 18 16 41 41 H 1.09002 * 109.47507 * 59.99788 * 19 18 16 42 42 H 0.96703 * 113.99950 * 60.00003 * 22 20 19 43 43 H 1.09002 * 109.46749 * 60.00680 * 23 20 19 44 44 H 1.08993 * 109.47229 * 180.02562 * 23 20 19 45 45 H 1.08993 * 109.47557 * 179.97438 * 24 23 20 46 46 H 1.09002 * 109.47337 * 299.99919 * 24 23 20 47 47 H 1.07999 * 120.04191 * 179.74738 * 25 12 11 48 48 H 1.08000 * 119.82742 * 180.27890 * 26 25 12 49 49 H 1.07990 * 119.79117 * 179.72075 * 27 26 25 50 50 H 1.07999 * 119.96056 * 180.02562 * 28 27 26 51 51 H 1.07998 * 126.45824 * 179.74146 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7129 -0.1736 -2.1980 6 7 2.9553 -1.1177 -3.1398 7 6 2.3179 -2.2808 -2.7713 8 6 2.3241 -3.5452 -3.5137 9 8 1.7180 -4.5078 -3.0811 10 7 3.0011 -3.6414 -4.6751 11 6 2.9180 -4.8046 -5.4347 12 6 4.0335 -5.2575 -6.1549 13 6 5.3005 -4.5034 -6.1122 14 8 5.3554 -3.4397 -5.5256 15 7 6.3972 -4.9934 -6.7234 16 6 7.6557 -4.2446 -6.6805 17 1 7.4438 -3.1758 -6.7105 18 6 8.4050 -4.5800 -5.3893 19 6 9.7189 -3.7975 -5.3443 20 6 10.5818 -4.1798 -6.5485 21 1 10.7940 -5.2486 -6.5187 22 8 11.8093 -3.4495 -6.5061 23 6 9.8325 -3.8446 -7.8397 24 6 8.5185 -4.6270 -7.8848 25 6 3.9354 -6.4238 -6.9174 26 6 2.7505 -7.1267 -6.9490 27 6 1.6504 -6.6764 -6.2368 28 6 1.7304 -5.5230 -5.4832 29 6 1.6670 -2.0382 -1.5799 30 1 -0.3934 0.4417 -0.7650 31 1 1.7923 -0.5138 0.8899 32 1 1.5879 2.4585 -1.2242 33 1 1.5615 2.4679 1.2086 34 1 3.0832 0.8407 -2.2156 35 1 3.4891 -0.9943 -3.9403 36 1 3.5464 -2.9000 -4.9815 37 1 6.3533 -5.8417 -7.1916 38 1 7.7904 -4.3072 -4.5313 39 1 8.6168 -5.6488 -5.3593 40 1 10.2525 -4.0361 -4.4242 41 1 9.5067 -2.7288 -5.3741 42 1 12.3375 -3.6138 -5.7130 43 1 9.6203 -2.7758 -7.8695 44 1 10.4470 -4.1173 -8.6976 45 1 7.9846 -4.3878 -8.8044 46 1 8.7308 -5.6957 -7.8550 47 1 4.7884 -6.7767 -7.4778 48 1 2.6777 -8.0307 -7.5354 49 1 0.7248 -7.2317 -6.2714 50 1 0.8687 -5.1789 -4.9307 51 1 1.0686 -2.7421 -1.0206 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11560734_10543058.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:09:39 Heat of formation + Delta-G solvation = -79.390651 kcal Electronic energy + Delta-G solvation = -35654.222056 eV Core-core repulsion = 30906.390983 eV Total energy + Delta-G solvation = -4747.831074 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -42.71642 -41.87070 -40.80663 -39.74441 -38.96690 -37.82912 -37.09891 -36.06152 -34.61235 -32.73314 -32.34778 -31.88949 -31.48020 -30.22155 -29.26592 -26.65681 -25.24651 -24.91047 -23.89308 -23.44099 -22.66148 -21.85204 -21.25251 -21.07022 -20.75502 -20.07899 -19.12750 -18.34276 -18.19214 -17.63361 -17.54730 -17.14039 -16.84174 -16.53102 -16.23387 -16.15079 -15.91526 -15.72925 -15.51093 -15.47987 -15.42554 -14.91846 -14.78002 -14.72994 -14.58573 -14.37925 -14.18098 -13.89202 -13.74820 -13.51466 -13.37160 -13.27149 -13.17437 -12.96065 -12.66919 -12.47197 -12.45930 -12.19702 -11.85742 -11.76613 -11.74156 -11.44860 -11.30316 -10.98474 -10.78004 -10.55768 -10.31216 -10.03451 -10.00678 -9.54002 -9.21941 -4.85767 -0.37551 0.05105 0.46096 1.34017 1.51782 1.66964 1.70557 1.77854 1.96209 2.01348 2.06247 2.09601 2.76932 3.25854 3.50703 3.52382 3.58179 3.61477 3.69706 3.71003 3.91002 4.00746 4.02589 4.08155 4.08815 4.19738 4.23828 4.27843 4.29941 4.33121 4.34500 4.40604 4.42012 4.63653 4.69692 4.77802 4.80613 4.86497 4.93485 4.94324 5.00235 5.02041 5.08246 5.10838 5.16832 5.22966 5.27662 5.30281 5.41644 5.42776 5.50553 5.65600 5.82428 6.15654 6.34089 6.39942 6.60047 6.78964 6.85891 7.04997 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.058 4.058 3 Si 0.786 3.214 4 C -0.222 4.222 5 C 0.064 3.936 6 N -0.519 5.519 7 C -0.077 4.077 8 C 0.586 3.414 9 O -0.549 6.549 10 N -0.656 5.656 11 C 0.185 3.815 12 C -0.185 4.185 13 C 0.567 3.433 14 O -0.575 6.575 15 N -0.703 5.703 16 C 0.146 3.854 17 H 0.074 0.926 18 C -0.122 4.122 19 C -0.143 4.143 20 C 0.102 3.898 21 H 0.068 0.932 22 O -0.589 6.589 23 C -0.111 4.111 24 C -0.114 4.114 25 C -0.057 4.057 26 C -0.137 4.137 27 C -0.071 4.071 28 C -0.154 4.154 29 C -0.090 4.090 30 H 0.384 0.616 31 H 0.112 0.888 32 H -0.271 1.271 33 H -0.310 1.310 34 H 0.216 0.784 35 H 0.433 0.567 36 H 0.423 0.577 37 H 0.416 0.584 38 H 0.049 0.951 39 H 0.078 0.922 40 H 0.075 0.925 41 H 0.060 0.940 42 H 0.394 0.606 43 H 0.061 0.939 44 H 0.078 0.922 45 H 0.087 0.913 46 H 0.091 0.909 47 H 0.166 0.834 48 H 0.164 0.836 49 H 0.150 0.850 50 H 0.121 0.879 51 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.361 -1.363 -6.670 9.318 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.166 4.166 3 Si 0.690 3.310 4 C -0.228 4.228 5 C -0.074 4.074 6 N -0.116 5.116 7 C -0.190 4.190 8 C 0.378 3.622 9 O -0.427 6.427 10 N -0.305 5.305 11 C 0.088 3.912 12 C -0.190 4.190 13 C 0.356 3.644 14 O -0.456 6.456 15 N -0.354 5.354 16 C 0.042 3.958 17 H 0.092 0.908 18 C -0.161 4.161 19 C -0.182 4.182 20 C 0.044 3.956 21 H 0.086 0.914 22 O -0.398 6.398 23 C -0.149 4.149 24 C -0.152 4.152 25 C -0.076 4.076 26 C -0.155 4.155 27 C -0.089 4.089 28 C -0.174 4.174 29 C -0.117 4.117 30 H 0.233 0.767 31 H 0.130 0.870 32 H -0.196 1.196 33 H -0.238 1.238 34 H 0.232 0.768 35 H 0.273 0.727 36 H 0.267 0.733 37 H 0.254 0.746 38 H 0.068 0.932 39 H 0.097 0.903 40 H 0.094 0.906 41 H 0.079 0.921 42 H 0.243 0.757 43 H 0.080 0.920 44 H 0.096 0.904 45 H 0.105 0.895 46 H 0.109 0.891 47 H 0.184 0.816 48 H 0.182 0.818 49 H 0.168 0.832 50 H 0.139 0.861 51 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 5.772 -0.537 -6.158 8.457 hybrid contribution -0.867 -0.370 -0.085 0.946 sum 4.905 -0.907 -6.243 7.991 Atomic orbital electron populations 1.86563 1.19278 1.80518 1.49973 1.24742 0.82686 1.12094 0.97118 0.94268 0.89468 0.70504 0.76778 1.19912 1.07423 0.95005 1.00483 1.22462 1.00239 0.95966 0.88773 1.41970 1.39623 1.08650 1.21311 1.19965 1.10262 0.87733 1.00998 1.17434 0.78145 0.86768 0.79900 1.90842 1.44959 1.38267 1.68668 1.43569 1.48542 1.17586 1.20798 1.17870 0.93193 0.87875 0.92213 1.19802 0.92300 0.99874 1.07044 1.18184 0.83867 0.84487 0.77858 1.90530 1.85403 1.24303 1.45399 1.45788 1.09133 1.25678 1.54834 1.21045 0.82458 0.96640 0.95667 0.90793 1.21801 0.95742 1.01198 0.97345 1.22166 0.96129 1.00660 0.99220 1.21911 0.83660 0.95222 0.94826 0.91397 1.86481 1.33987 1.70956 1.48347 1.21419 0.95534 1.00862 0.97116 1.21710 0.94381 1.01877 0.97235 1.21541 0.99559 0.91212 0.95318 1.21512 0.92169 1.01545 1.00323 1.21595 1.00447 0.93909 0.92987 1.21205 0.96393 0.98118 1.01684 1.21241 0.99564 0.96805 0.94127 0.76658 0.87034 1.19638 1.23812 0.76756 0.72661 0.73336 0.74595 0.93219 0.90314 0.90598 0.92124 0.75660 0.92013 0.90377 0.89456 0.89066 0.81622 0.81809 0.83188 0.86135 0.85010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.23 12.88 -148.98 -1.92 -5.15 16 2 C -0.06 -0.09 3.02 71.24 0.22 0.12 16 3 Si 0.79 -2.35 30.59 68.60 2.10 -0.25 16 4 C -0.22 -0.56 5.44 -20.12 -0.11 -0.67 16 5 C 0.06 -0.18 10.45 83.48 0.87 0.69 16 6 N -0.52 0.32 5.99 -183.62 -1.10 -0.78 16 7 C -0.08 -0.55 7.05 40.34 0.28 -0.27 16 8 C 0.59 6.53 7.50 86.43 0.65 7.18 16 9 O -0.55 -9.71 14.67 -4.33 -0.06 -9.78 16 10 N -0.66 -4.73 4.68 -306.57 -1.44 -6.17 16 11 C 0.19 1.28 6.25 38.63 0.24 1.52 16 12 C -0.18 -0.37 5.89 -19.98 -0.12 -0.49 16 13 C 0.57 1.17 7.72 86.69 0.67 1.84 16 14 O -0.57 -3.93 13.55 -4.03 -0.05 -3.98 16 15 N -0.70 3.21 5.03 -445.71 -2.24 0.97 16 16 C 0.15 -0.56 2.45 44.99 0.11 -0.45 16 17 H 0.07 0.04 7.58 -2.39 -0.02 0.02 16 18 C -0.12 0.33 5.49 30.59 0.17 0.50 16 19 C -0.14 0.45 5.54 30.59 0.17 0.62 16 20 C 0.10 -0.35 3.47 30.59 0.11 -0.25 16 21 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 22 O -0.59 0.12 13.32 -148.98 -1.98 -1.86 16 23 C -0.11 0.44 5.57 30.59 0.17 0.61 16 24 C -0.11 0.89 5.39 30.60 0.17 1.05 16 25 C -0.06 0.25 9.52 22.52 0.21 0.47 16 26 C -0.14 0.58 10.02 22.25 0.22 0.81 16 27 C -0.07 -0.02 10.03 22.30 0.22 0.20 16 28 C -0.15 -1.03 8.63 22.37 0.19 -0.84 16 29 C -0.09 -0.76 10.59 22.58 0.24 -0.52 16 30 H 0.38 -0.12 8.70 -74.06 -0.64 -0.77 16 31 H 0.11 0.19 7.96 -2.39 -0.02 0.17 16 32 H -0.27 0.28 7.11 99.48 0.71 0.99 16 33 H -0.31 -1.81 7.11 99.48 0.71 -1.10 16 34 H 0.22 -2.37 6.19 -2.91 -0.02 -2.38 16 35 H 0.43 -2.31 8.20 -92.71 -0.76 -3.07 16 36 H 0.42 1.91 5.45 -92.71 -0.51 1.40 16 37 H 0.42 -4.40 6.66 -92.71 -0.62 -5.02 16 38 H 0.05 0.12 8.14 -2.38 -0.02 0.10 16 39 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 40 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 41 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 42 H 0.39 -3.00 9.08 -74.06 -0.67 -3.68 16 43 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 44 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 45 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 46 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 47 H 0.17 -2.06 6.44 -2.91 -0.02 -2.08 16 48 H 0.16 -1.71 8.06 -2.91 -0.02 -1.73 16 49 H 0.15 -0.57 8.06 -2.92 -0.02 -0.60 16 50 H 0.12 1.24 6.53 -2.91 -0.02 1.22 16 51 H 0.13 1.52 8.06 -2.91 -0.02 1.49 16 Total: 0.00 -29.19 415.20 -4.14 -33.33 By element: Atomic # 1 Polarization: -16.33 SS G_CDS: -2.12 Total: -18.46 kcal Atomic # 6 Polarization: 7.45 SS G_CDS: 4.69 Total: 12.14 kcal Atomic # 7 Polarization: -1.20 SS G_CDS: -4.78 Total: -5.98 kcal Atomic # 8 Polarization: -16.76 SS G_CDS: -4.02 Total: -20.78 kcal Atomic # 14 Polarization: -2.35 SS G_CDS: 2.10 Total: -0.25 kcal Total: -29.19 -4.14 -33.33 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_10543058.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.066 kcal (2) G-P(sol) polarization free energy of solvation -29.188 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.253 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.325 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.391 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds