Wall clock time and date at job start Sat Mar 6 2021 16:09:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37663 * 125.67886 * 2 1 4 4 C 1.46622 * 126.23523 * 0.02562 * 3 2 1 5 5 O 1.21698 * 119.99414 * 185.57555 * 4 3 2 6 6 N 1.34771 * 120.00026 * 5.56841 * 4 3 2 7 7 C 1.39166 * 120.00161 * 185.12634 * 6 4 3 8 8 C 1.40289 * 120.17399 * 206.74595 * 7 6 4 9 9 C 1.47508 * 120.19855 * 359.97438 * 8 7 6 10 10 O 1.21599 * 119.99857 * 6.03831 * 9 8 7 11 11 N 1.34777 * 120.00027 * 186.04116 * 9 8 7 12 12 C 1.46502 * 119.99808 * 180.02562 * 11 9 8 13 13 H 1.08997 * 109.46995 * 34.99683 * 12 11 9 14 14 C 1.52996 * 109.47154 * 155.00103 * 12 11 9 15 15 C 1.52998 * 109.47275 * 179.97438 * 14 12 11 16 16 C 1.52996 * 109.47076 * 299.99585 * 15 14 12 17 17 H 1.09005 * 109.47580 * 300.00303 * 16 15 14 18 18 O 1.42893 * 109.47261 * 180.02562 * 16 15 14 19 19 C 1.53000 * 109.47074 * 60.00010 * 16 15 14 20 20 C 1.52998 * 109.47162 * 299.99938 * 19 16 15 21 21 C 1.39688 * 119.60418 * 180.02562 * 8 7 6 22 22 C 1.37797 * 119.91883 * 359.97438 * 21 8 7 23 23 C 1.38567 * 120.33907 * 0.02562 * 22 21 8 24 24 C 1.38008 * 120.41097 * 359.71364 * 23 22 21 25 25 C 1.37914 * 107.52516 * 180.02562 * 3 2 1 26 26 C 1.39818 * 107.08561 * 359.97438 * 25 3 2 27 27 C 1.35465 * 107.86950 * 0.02562 * 26 25 3 28 28 C 1.50698 * 125.56202 * 180.25942 * 27 26 25 29 29 O 1.42898 * 109.47193 * 149.69498 * 28 27 26 30 30 Si 1.86309 * 109.47184 * 29.69679 * 28 27 26 31 31 H 1.09002 * 109.47212 * 276.26238 * 1 2 3 32 32 H 1.08997 * 109.47135 * 36.26249 * 1 2 3 33 33 H 1.08999 * 109.47035 * 156.26539 * 1 2 3 34 34 H 0.96998 * 120.00429 * 5.12793 * 6 4 3 35 35 H 0.96998 * 120.00163 * 359.97438 * 11 9 8 36 36 H 1.09008 * 109.47098 * 299.99971 * 14 12 11 37 37 H 1.09001 * 109.47191 * 59.99504 * 14 12 11 38 38 H 1.08997 * 109.46862 * 59.99588 * 15 14 12 39 39 H 1.09003 * 109.46753 * 179.97438 * 15 14 12 40 40 H 0.96707 * 114.00128 * 180.02562 * 18 16 15 41 41 H 1.08997 * 109.47282 * 59.99742 * 19 16 15 42 42 H 1.08998 * 109.47425 * 179.97438 * 19 16 15 43 43 H 1.08993 * 109.47457 * 299.99659 * 20 19 16 44 44 H 1.09007 * 109.47217 * 179.97438 * 20 19 16 45 45 H 1.07997 * 120.04427 * 180.02562 * 21 8 7 46 46 H 1.08003 * 119.82424 * 179.97438 * 22 21 8 47 47 H 1.08003 * 119.79616 * 180.02562 * 23 22 21 48 48 H 1.07999 * 119.96599 * 180.28554 * 24 23 22 49 49 H 1.07997 * 126.45625 * 180.02562 * 25 3 2 50 50 H 1.08005 * 126.06933 * 180.02562 * 26 25 3 51 51 H 1.09002 * 109.47762 * 269.69713 * 28 27 26 52 52 H 0.96705 * 114.00104 * 180.02562 * 29 28 27 53 53 H 1.48502 * 109.99680 * 298.68040 * 30 28 27 54 54 H 1.48505 * 109.99744 * 59.99680 * 30 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1182 0.0000 4 6 1.8127 2.5120 0.0005 5 8 2.6210 3.4160 -0.1019 6 7 0.4993 2.7919 0.1143 7 6 0.0563 4.1069 0.0079 8 6 -1.1276 4.5059 0.6461 9 6 -1.9101 3.5343 1.4331 10 8 -1.4755 2.4144 1.6221 11 7 -3.1067 3.8877 1.9427 12 6 -3.8835 2.9228 2.7249 13 1 -3.2061 2.2947 3.3033 14 6 -4.8202 3.6723 3.6745 15 6 -5.6320 2.6646 4.4908 16 6 -6.4576 1.7896 3.5456 17 1 -7.1347 2.4180 2.9670 18 8 -7.2162 0.8489 4.3080 19 6 -5.5210 1.0400 2.5959 20 6 -4.7092 2.0477 1.7795 21 6 -1.5615 5.8287 0.5309 22 6 -0.8264 6.7315 -0.2062 23 6 0.3426 6.3342 -0.8354 24 6 0.7869 5.0322 -0.7263 25 6 3.5784 0.6885 -0.0006 26 6 3.5523 -0.7094 -0.0003 27 6 2.2555 -1.1010 -0.0002 28 6 1.7708 -2.5279 0.0056 29 8 0.5154 -2.6018 0.6842 30 14 3.0148 -3.6027 0.8822 31 1 -0.3634 0.1121 1.0215 32 1 -0.3633 0.8286 -0.6078 33 1 -0.3633 -0.9407 -0.4136 34 1 -0.1373 2.0769 0.2705 35 1 -3.4532 4.7811 1.7923 36 1 -4.2320 4.2961 4.3476 37 1 -5.4976 4.3004 3.0959 38 1 -4.9548 2.0362 5.0693 39 1 -6.2989 3.1987 5.1677 40 1 -7.7646 0.2594 3.7723 41 1 -4.8438 0.4116 3.1744 42 1 -6.1091 0.4163 1.9228 43 1 -5.3862 2.6761 1.2010 44 1 -4.0416 1.5137 1.1033 45 1 -2.4716 6.1437 1.0196 46 1 -1.1635 7.7537 -0.2946 47 1 0.9122 7.0492 -1.4106 48 1 1.7014 4.7315 -1.2159 49 1 4.4588 1.3140 -0.0004 50 1 4.4133 -1.3615 -0.0003 51 1 1.6501 -2.8749 -1.0206 52 1 0.1431 -3.4932 0.7266 53 1 4.3160 -3.5595 0.1680 54 1 3.1884 -3.1399 2.2826 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11560734_10803936.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:09:49 Heat of formation + Delta-G solvation = -60.564075 kcal Electronic energy + Delta-G solvation = -39072.984156 eV Core-core repulsion = 34170.431845 eV Total energy + Delta-G solvation = -4902.552311 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.188 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -43.03425 -41.97772 -40.90627 -39.79733 -39.00277 -37.72812 -37.15753 -36.32158 -34.66946 -34.09775 -32.37450 -32.07693 -31.90032 -30.62985 -29.30600 -27.91490 -26.97938 -25.18358 -24.55176 -23.90625 -23.26894 -22.39771 -22.04402 -21.57770 -21.08167 -20.66145 -19.21665 -18.90807 -18.45544 -18.29396 -18.20046 -17.58432 -17.26021 -17.12107 -16.65092 -16.48636 -16.14512 -15.92819 -15.78560 -15.56689 -15.51059 -15.36653 -15.30721 -14.95109 -14.80274 -14.63321 -14.44559 -14.20632 -13.95931 -13.86904 -13.66547 -13.50452 -13.38701 -13.33611 -13.28014 -13.11691 -12.98323 -12.84271 -12.71262 -12.47036 -12.20417 -12.01030 -11.89450 -11.78205 -11.41245 -11.31744 -11.02281 -10.78607 -10.64999 -10.35000 -10.05247 -10.03681 -9.49989 -9.18402 -4.97611 -0.44860 -0.04128 0.38161 1.07543 1.37535 1.61200 1.66686 1.70787 1.77305 1.91783 1.98181 2.08904 2.73436 3.10041 3.24826 3.26854 3.50186 3.57391 3.58227 3.63486 3.68499 3.68900 3.98070 3.99516 4.04356 4.08307 4.10705 4.18392 4.23400 4.24790 4.26203 4.29806 4.31636 4.38668 4.39402 4.41220 4.51239 4.62460 4.73311 4.76792 4.83173 4.85469 4.92120 4.97151 4.99808 5.07051 5.09553 5.13778 5.21056 5.24530 5.26975 5.39239 5.40387 5.43868 5.63528 5.80587 5.86146 6.10459 6.35279 6.67784 6.80730 6.86686 7.00859 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.408 5.408 3 C -0.090 4.090 4 C 0.585 3.415 5 O -0.541 6.541 6 N -0.663 5.663 7 C 0.180 3.820 8 C -0.191 4.191 9 C 0.565 3.435 10 O -0.578 6.578 11 N -0.700 5.700 12 C 0.144 3.856 13 H 0.066 0.934 14 C -0.115 4.115 15 C -0.112 4.112 16 C 0.103 3.897 17 H 0.072 0.928 18 O -0.590 6.590 19 C -0.144 4.144 20 C -0.120 4.120 21 C -0.053 4.053 22 C -0.139 4.139 23 C -0.067 4.067 24 C -0.165 4.165 25 C -0.105 4.105 26 C -0.233 4.233 27 C 0.068 3.932 28 C -0.061 4.061 29 O -0.564 6.564 30 Si 0.820 3.180 31 H 0.082 0.918 32 H 0.074 0.926 33 H 0.130 0.870 34 H 0.425 0.575 35 H 0.417 0.583 36 H 0.081 0.919 37 H 0.095 0.905 38 H 0.056 0.944 39 H 0.077 0.923 40 H 0.394 0.606 41 H 0.056 0.944 42 H 0.081 0.919 43 H 0.083 0.917 44 H 0.055 0.945 45 H 0.169 0.831 46 H 0.167 0.833 47 H 0.152 0.848 48 H 0.129 0.871 49 H 0.155 0.845 50 H 0.160 0.840 51 H 0.114 0.886 52 H 0.412 0.588 53 H -0.281 1.281 54 H -0.313 1.313 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.362 -2.152 -3.116 10.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 N -0.082 5.082 3 C -0.202 4.202 4 C 0.376 3.624 5 O -0.420 6.420 6 N -0.317 5.317 7 C 0.083 3.917 8 C -0.197 4.197 9 C 0.354 3.646 10 O -0.460 6.460 11 N -0.351 5.351 12 C 0.040 3.960 13 H 0.084 0.916 14 C -0.153 4.153 15 C -0.150 4.150 16 C 0.044 3.956 17 H 0.089 0.911 18 O -0.398 6.398 19 C -0.182 4.182 20 C -0.159 4.159 21 C -0.072 4.072 22 C -0.158 4.158 23 C -0.086 4.086 24 C -0.185 4.185 25 C -0.132 4.132 26 C -0.257 4.257 27 C -0.051 4.051 28 C -0.170 4.170 29 O -0.375 6.375 30 Si 0.724 3.276 31 H 0.101 0.899 32 H 0.092 0.908 33 H 0.148 0.852 34 H 0.276 0.724 35 H 0.255 0.745 36 H 0.100 0.900 37 H 0.114 0.886 38 H 0.075 0.925 39 H 0.096 0.904 40 H 0.244 0.756 41 H 0.075 0.925 42 H 0.099 0.901 43 H 0.102 0.898 44 H 0.074 0.926 45 H 0.186 0.814 46 H 0.184 0.816 47 H 0.170 0.830 48 H 0.147 0.853 49 H 0.172 0.828 50 H 0.177 0.823 51 H 0.131 0.869 52 H 0.265 0.735 53 H -0.208 1.208 54 H -0.242 1.242 Dipole moment (debyes) X Y Z Total from point charges -7.833 -1.452 -2.079 8.233 hybrid contribution -0.170 0.327 -0.572 0.681 sum -8.003 -1.125 -2.651 8.505 Atomic orbital electron populations 1.22467 0.74903 1.05736 1.04208 1.44112 1.07390 1.04331 1.52411 1.20304 0.91970 0.85991 1.21893 1.17349 0.82112 0.87263 0.75667 1.90777 1.54423 1.46387 1.50367 1.44380 1.08735 1.09291 1.69271 1.18058 0.93929 0.84691 0.95021 1.19735 0.98288 0.96407 1.05248 1.18238 0.81344 0.86482 0.78513 1.90554 1.70856 1.23244 1.61350 1.45769 1.18282 1.17605 1.53444 1.21064 0.92453 0.90453 0.92046 0.91551 1.21711 0.97820 0.97807 0.97929 1.21421 0.98424 0.97189 0.98013 1.21904 0.92026 0.89917 0.91722 0.91054 1.86488 1.62731 1.51463 1.39152 1.22171 0.99003 0.98437 0.98592 1.21796 0.98505 0.97704 0.97871 1.21534 0.99897 0.89770 0.96018 1.21524 0.94735 1.01604 0.97915 1.21629 0.95880 0.94548 0.96508 1.21430 1.01593 0.94633 1.00851 1.21454 0.94753 0.95190 1.01809 1.20812 0.95801 0.95125 1.13923 1.20853 0.90407 0.88809 1.05060 1.24762 0.95554 0.92821 1.03828 1.86400 1.34751 1.37479 1.78902 0.94533 0.75217 0.83421 0.74455 0.89937 0.90785 0.85219 0.72433 0.74465 0.89994 0.88634 0.92479 0.90399 0.75605 0.92493 0.90078 0.89795 0.92593 0.81415 0.81586 0.83007 0.85313 0.82767 0.82270 0.86873 0.73496 1.20756 1.24205 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.34 8.50 127.77 1.09 1.42 16 2 N -0.41 -4.05 3.16 -519.71 -1.64 -5.70 16 3 C -0.09 -1.31 6.88 40.34 0.28 -1.03 16 4 C 0.58 9.67 7.56 86.43 0.65 10.33 16 5 O -0.54 -11.20 14.12 -4.34 -0.06 -11.27 16 6 N -0.66 -8.36 4.46 -306.57 -1.37 -9.72 16 7 C 0.18 1.86 6.41 38.63 0.25 2.11 16 8 C -0.19 -0.86 5.89 -19.98 -0.12 -0.98 16 9 C 0.56 2.52 7.70 86.69 0.67 3.19 16 10 O -0.58 -5.99 13.12 -4.03 -0.05 -6.04 16 11 N -0.70 2.21 5.03 -445.72 -2.24 -0.03 16 12 C 0.14 -0.35 2.46 44.99 0.11 -0.24 16 13 H 0.07 0.24 7.58 -2.39 -0.02 0.22 16 14 C -0.11 0.72 5.39 30.59 0.16 0.89 16 15 C -0.11 0.29 5.57 30.59 0.17 0.46 16 16 C 0.10 -0.33 3.47 30.59 0.11 -0.22 16 17 H 0.07 -0.43 8.14 -2.38 -0.02 -0.45 16 18 O -0.59 -0.04 13.32 -148.98 -1.98 -2.03 16 19 C -0.14 0.49 5.55 30.59 0.17 0.66 16 20 C -0.12 0.41 5.49 30.60 0.17 0.58 16 21 C -0.05 0.15 9.52 22.52 0.21 0.37 16 22 C -0.14 0.41 10.02 22.24 0.22 0.63 16 23 C -0.07 -0.13 10.03 22.29 0.22 0.09 16 24 C -0.16 -1.54 8.69 22.37 0.19 -1.35 16 25 C -0.11 -1.40 10.66 22.58 0.24 -1.16 16 26 C -0.23 -2.23 9.37 22.01 0.21 -2.03 16 27 C 0.07 0.52 6.18 41.34 0.26 0.77 16 28 C -0.06 0.11 2.86 71.24 0.20 0.32 16 29 O -0.56 2.04 10.21 -148.98 -1.52 0.52 16 30 Si 0.82 -2.37 31.21 68.60 2.14 -0.23 16 31 H 0.08 0.62 7.67 -2.39 -0.02 0.60 16 32 H 0.07 0.36 6.02 -2.39 -0.01 0.35 16 33 H 0.13 0.03 6.39 -2.39 -0.02 0.01 16 34 H 0.43 4.50 2.01 -92.71 -0.19 4.31 16 35 H 0.42 -4.01 6.67 -92.71 -0.62 -4.63 16 36 H 0.08 -0.53 8.14 -2.38 -0.02 -0.54 16 37 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 38 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 39 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 40 H 0.39 -3.06 9.08 -74.05 -0.67 -3.73 16 41 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 42 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 43 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 44 H 0.06 0.02 8.14 -2.38 -0.02 0.00 16 45 H 0.17 -1.90 6.45 -2.91 -0.02 -1.92 16 46 H 0.17 -1.59 8.06 -2.91 -0.02 -1.61 16 47 H 0.15 -0.39 8.06 -2.91 -0.02 -0.41 16 48 H 0.13 1.74 5.88 -2.91 -0.02 1.72 16 49 H 0.15 1.82 8.06 -2.91 -0.02 1.79 16 50 H 0.16 0.96 6.69 -2.91 -0.02 0.94 16 51 H 0.11 -0.82 7.96 -2.39 -0.02 -0.84 16 52 H 0.41 -6.07 8.74 -74.05 -0.65 -6.71 16 53 H -0.28 -0.49 6.87 99.48 0.68 0.19 16 54 H -0.31 -2.36 7.11 99.48 0.71 -1.65 16 Total: 0.00 -31.88 425.41 -2.38 -34.26 By element: Atomic # 1 Polarization: -13.46 SS G_CDS: -1.12 Total: -14.58 kcal Atomic # 6 Polarization: 9.34 SS G_CDS: 5.47 Total: 14.81 kcal Atomic # 7 Polarization: -10.20 SS G_CDS: -5.25 Total: -15.45 kcal Atomic # 8 Polarization: -15.19 SS G_CDS: -3.62 Total: -18.81 kcal Atomic # 14 Polarization: -2.37 SS G_CDS: 2.14 Total: -0.23 kcal Total: -31.88 -2.38 -34.26 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_10803936.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.304 kcal (2) G-P(sol) polarization free energy of solvation -31.877 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.83 seconds