Wall clock time and date at job start Sat Mar 6 2021 16:11:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47366 * 2 1 4 4 C 1.50704 * 109.46752 * 119.99827 * 2 1 3 5 5 C 1.38193 * 119.84028 * 255.25046 * 4 2 1 6 6 C 1.38304 * 120.14617 * 180.29705 * 5 4 2 7 7 F 1.35098 * 120.08564 * 179.70599 * 6 5 4 8 8 C 1.39822 * 119.82984 * 359.73071 * 6 5 4 9 9 C 1.47652 * 120.15756 * 179.97438 * 8 6 5 10 10 O 1.21576 * 120.00196 * 0.02562 * 9 8 6 11 11 N 1.34782 * 120.00115 * 180.02562 * 9 8 6 12 12 C 1.39192 * 120.00187 * 175.55664 * 11 9 8 13 13 C 1.40288 * 120.16983 * 215.52735 * 12 11 9 14 14 C 1.47510 * 120.19378 * 359.97438 * 13 12 11 15 15 O 1.21593 * 120.00196 * 5.45100 * 14 13 12 16 16 N 1.34782 * 119.99812 * 185.44698 * 14 13 12 17 17 C 1.46499 * 120.00299 * 180.02562 * 16 14 13 18 18 H 1.08997 * 109.46788 * 34.99487 * 17 16 14 19 19 C 1.52994 * 109.47499 * 155.00218 * 17 16 14 20 20 C 1.52991 * 109.47301 * 180.02562 * 19 17 16 21 21 C 1.53004 * 109.46793 * 299.99300 * 20 19 17 22 22 H 1.08995 * 109.47804 * 300.00268 * 21 20 19 23 23 O 1.42899 * 109.47120 * 179.97438 * 21 20 19 24 24 C 1.53006 * 109.46867 * 60.00345 * 21 20 19 25 25 C 1.52991 * 109.46974 * 299.99808 * 24 21 20 26 26 C 1.39686 * 119.60143 * 179.97438 * 13 12 11 27 27 C 1.37788 * 119.92165 * 359.97438 * 26 13 12 28 28 C 1.38572 * 120.34011 * 0.02562 * 27 26 13 29 29 C 1.38006 * 120.40323 * 359.74371 * 28 27 26 30 30 C 1.39676 * 119.68930 * 359.97438 * 8 6 5 31 31 C 1.38070 * 119.84652 * 0.02562 * 30 8 6 32 32 F 1.35099 * 119.91490 * 180.02562 * 31 30 8 33 33 H 0.96707 * 114.00128 * 300.00437 * 1 2 3 34 34 H 1.08997 * 109.47159 * 239.99725 * 2 1 3 35 35 H 1.48491 * 110.00149 * 178.67886 * 3 2 1 36 36 H 1.48504 * 109.99882 * 299.99980 * 3 2 1 37 37 H 1.08000 * 119.92522 * 0.03144 * 5 4 2 38 38 H 0.97003 * 119.99555 * 355.54578 * 11 9 8 39 39 H 0.97001 * 119.99673 * 0.02562 * 16 14 13 40 40 H 1.09012 * 109.46834 * 300.00139 * 19 17 16 41 41 H 1.09001 * 109.47447 * 59.99368 * 19 17 16 42 42 H 1.08993 * 109.47759 * 59.99505 * 20 19 17 43 43 H 1.09004 * 109.47598 * 179.97438 * 20 19 17 44 44 H 0.96701 * 114.00228 * 179.97438 * 23 21 20 45 45 H 1.08998 * 109.46721 * 59.99871 * 24 21 20 46 46 H 1.09001 * 109.46569 * 179.97438 * 24 21 20 47 47 H 1.09006 * 109.47313 * 299.99938 * 25 24 21 48 48 H 1.09004 * 109.47440 * 179.97438 * 25 24 21 49 49 H 1.08002 * 120.03418 * 180.02562 * 26 13 12 50 50 H 1.08007 * 119.82911 * 179.97438 * 27 26 13 51 51 H 1.08001 * 119.79824 * 179.97438 * 28 27 26 52 52 H 1.07999 * 119.96509 * 180.27968 * 29 28 27 53 53 H 1.07999 * 120.07903 * 179.97438 * 30 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.4481 0.0202 2.2835 6 6 2.9165 -0.6256 3.4133 7 9 3.4270 0.0896 4.4395 8 6 2.8607 -2.0205 3.4904 9 6 3.3592 -2.7175 4.6929 10 8 3.8191 -2.0783 5.6192 11 7 3.3044 -4.0623 4.7637 12 6 3.8577 -4.7249 5.8556 13 6 4.4817 -5.9695 5.6829 14 6 4.5545 -6.5833 4.3436 15 8 4.1625 -5.9682 3.3707 16 7 5.0557 -7.8260 4.1982 17 6 5.1286 -8.4356 2.8680 18 1 5.3486 -7.6666 2.1276 19 6 6.2354 -9.4917 2.8509 20 6 6.3119 -10.1278 1.4616 21 6 4.9723 -10.7876 1.1284 22 1 4.7519 -11.5568 1.8685 23 8 5.0435 -11.3813 -0.1695 24 6 3.8654 -9.7315 1.1455 25 6 3.7889 -9.0953 2.5348 26 6 5.0336 -6.6238 6.7868 27 6 4.9627 -6.0448 8.0351 28 6 4.3457 -4.8153 8.2024 29 6 3.8001 -4.1547 7.1206 30 6 2.3312 -2.7517 2.4246 31 6 1.8674 -2.0936 1.3030 32 9 1.3544 -2.7994 0.2716 33 1 -0.3934 0.4418 0.7651 34 1 1.7923 -0.5139 -0.8899 35 1 3.5346 1.7702 0.0322 36 1 1.5616 2.4679 -1.2085 37 1 2.4904 1.0977 2.2222 38 1 2.8791 -4.5684 4.0538 39 1 5.3681 -8.3168 4.9744 40 1 7.1899 -9.0216 3.0880 41 1 6.0154 -10.2607 3.5914 42 1 6.5321 -9.3587 0.7214 43 1 7.1007 -10.8800 1.4492 44 1 4.2273 -11.8193 -0.4470 45 1 4.0857 -8.9623 0.4053 46 1 2.9111 -10.2015 0.9076 47 1 3.5686 -9.8646 3.2750 48 1 3.0007 -8.3426 2.5469 49 1 5.5159 -7.5819 6.6617 50 1 5.3895 -6.5522 8.8877 51 1 4.2948 -4.3697 9.1849 52 1 3.3249 -3.1947 7.2584 53 1 2.2855 -3.8295 2.4774 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11560734_12360598.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:11:12 Heat of formation + Delta-G solvation = -176.740713 kcal Electronic energy + Delta-G solvation = -42965.119745 eV Core-core repulsion = 37211.359075 eV Total energy + Delta-G solvation = -5753.760670 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.158 amu Computer time = 2.05 seconds Orbital eigenvalues (eV) -50.20467 -50.18059 -42.30183 -41.23440 -40.37105 -39.72790 -38.98485 -37.69543 -37.10905 -36.11480 -34.62953 -33.58687 -32.33975 -31.90144 -31.47894 -30.78636 -29.30077 -27.87270 -25.20540 -24.72710 -24.49941 -23.90433 -23.49131 -22.81825 -21.96460 -21.56331 -21.07816 -19.85564 -19.27494 -18.86113 -18.73141 -18.22522 -18.07531 -17.87742 -17.58721 -17.41988 -17.09437 -16.76054 -16.57597 -16.43074 -16.26622 -16.07903 -15.96215 -15.78107 -15.66915 -15.51216 -15.47654 -15.41172 -15.15852 -14.83295 -14.72331 -14.52356 -14.22531 -14.18854 -13.91334 -13.78749 -13.39048 -13.28512 -13.26734 -13.12152 -13.09139 -12.96986 -12.68223 -12.46945 -12.36917 -12.20773 -12.19382 -11.77824 -11.73578 -11.33881 -11.31082 -10.96099 -10.78767 -10.67527 -10.63624 -10.30193 -9.99432 -9.94988 -9.32801 -5.07192 -0.98431 -0.40468 -0.29156 0.23595 1.13107 1.25018 1.61423 1.63814 1.75264 1.92342 1.96027 2.09617 2.67587 2.71179 2.77510 3.01221 3.20316 3.24544 3.34638 3.48538 3.52271 3.60442 3.68638 3.69731 3.72818 3.99504 4.02166 4.08235 4.09211 4.18280 4.22052 4.25994 4.26206 4.28321 4.31218 4.36135 4.39526 4.40866 4.45566 4.60033 4.62384 4.63637 4.80084 4.85494 4.92846 4.99427 5.01952 5.07124 5.09230 5.17392 5.21436 5.27189 5.28494 5.29749 5.41475 5.44654 5.83446 6.06183 6.39928 6.66350 6.70075 6.84731 7.05499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.082 4.082 3 Si 0.788 3.212 4 C -0.091 4.091 5 C -0.116 4.116 6 C 0.151 3.849 7 F -0.116 7.116 8 C -0.152 4.152 9 C 0.558 3.442 10 O -0.531 6.531 11 N -0.647 5.647 12 C 0.180 3.820 13 C -0.181 4.181 14 C 0.564 3.436 15 O -0.575 6.575 16 N -0.703 5.703 17 C 0.145 3.855 18 H 0.067 0.933 19 C -0.114 4.114 20 C -0.112 4.112 21 C 0.103 3.897 22 H 0.072 0.928 23 O -0.590 6.590 24 C -0.145 4.145 25 C -0.121 4.121 26 C -0.059 4.059 27 C -0.135 4.135 28 C -0.072 4.072 29 C -0.150 4.150 30 C -0.080 4.080 31 C 0.099 3.901 32 F -0.130 7.130 33 H 0.400 0.600 34 H 0.112 0.888 35 H -0.280 1.280 36 H -0.288 1.288 37 H 0.190 0.810 38 H 0.424 0.576 39 H 0.416 0.584 40 H 0.083 0.917 41 H 0.095 0.905 42 H 0.056 0.944 43 H 0.078 0.922 44 H 0.394 0.606 45 H 0.055 0.945 46 H 0.078 0.922 47 H 0.084 0.916 48 H 0.054 0.946 49 H 0.165 0.835 50 H 0.164 0.836 51 H 0.152 0.848 52 H 0.130 0.870 53 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.929 -4.595 5.052 6.892 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.191 4.191 3 Si 0.691 3.309 4 C -0.092 4.092 5 C -0.134 4.134 6 C 0.131 3.869 7 F -0.094 7.094 8 C -0.156 4.156 9 C 0.347 3.653 10 O -0.409 6.409 11 N -0.296 5.296 12 C 0.083 3.917 13 C -0.187 4.187 14 C 0.353 3.647 15 O -0.456 6.456 16 N -0.354 5.354 17 C 0.040 3.960 18 H 0.085 0.915 19 C -0.152 4.152 20 C -0.150 4.150 21 C 0.044 3.956 22 H 0.090 0.910 23 O -0.399 6.399 24 C -0.183 4.183 25 C -0.159 4.159 26 C -0.078 4.078 27 C -0.153 4.153 28 C -0.090 4.090 29 C -0.171 4.171 30 C -0.100 4.100 31 C 0.080 3.920 32 F -0.109 7.109 33 H 0.251 0.749 34 H 0.130 0.870 35 H -0.206 1.206 36 H -0.215 1.215 37 H 0.206 0.794 38 H 0.268 0.732 39 H 0.255 0.745 40 H 0.101 0.899 41 H 0.113 0.887 42 H 0.075 0.925 43 H 0.096 0.904 44 H 0.244 0.756 45 H 0.074 0.926 46 H 0.097 0.903 47 H 0.102 0.898 48 H 0.073 0.927 49 H 0.183 0.817 50 H 0.182 0.818 51 H 0.169 0.831 52 H 0.148 0.852 53 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges 0.273 -3.224 3.998 5.143 hybrid contribution -0.637 -1.190 -0.555 1.459 sum -0.364 -4.414 3.443 5.610 Atomic orbital electron populations 1.86559 1.16070 1.82192 1.50563 1.25389 0.86157 1.11925 0.95579 0.93771 0.78158 0.73312 0.85642 1.20648 0.98596 0.92133 0.97848 1.21037 0.99694 1.02262 0.90416 1.17673 0.95681 0.87644 0.85929 1.91622 1.83674 1.77237 1.56843 1.19651 1.07026 0.92834 0.96121 1.18201 0.78359 0.82183 0.86560 1.90842 1.45199 1.66326 1.38495 1.43432 1.56295 1.06284 1.23549 1.17889 0.94654 0.91837 0.87298 1.19798 1.06993 0.97311 0.94586 1.18258 0.76885 0.81631 0.87950 1.90618 1.50341 1.63194 1.41449 1.45791 1.63316 1.15346 1.10992 1.21028 0.95921 0.95119 0.83886 0.91518 1.21705 0.98331 0.97727 0.97441 1.21424 0.96819 1.00133 0.96665 1.21917 0.95086 0.93891 0.84676 0.91016 1.86485 1.42565 1.75662 1.35183 1.22181 0.99832 0.99115 0.97213 1.21797 0.96845 1.00091 0.97184 1.21523 0.95448 0.99858 0.90954 1.21522 1.00003 0.95509 0.98306 1.21628 0.93823 0.94538 0.99042 1.21362 1.03103 1.01628 0.90970 1.21260 0.96174 1.01712 0.90808 1.17378 0.99438 0.89448 0.85763 1.91558 1.84402 1.78424 1.56475 0.74937 0.87013 1.20600 1.21498 0.79356 0.73230 0.74540 0.89855 0.88668 0.92478 0.90361 0.75642 0.92617 0.90323 0.89789 0.92695 0.81739 0.81847 0.83063 0.85241 0.82248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.40 12.88 -148.98 -1.92 -1.52 16 2 C -0.08 0.10 2.44 71.24 0.17 0.27 16 3 Si 0.79 -3.27 29.90 68.60 2.05 -1.22 16 4 C -0.09 0.00 5.27 -19.77 -0.10 -0.10 16 5 C -0.12 0.20 8.62 22.27 0.19 0.39 16 6 C 0.15 0.65 7.28 22.67 0.17 0.81 16 7 F -0.12 -0.95 15.55 44.97 0.70 -0.26 16 8 C -0.15 -0.89 5.88 -20.06 -0.12 -1.00 16 9 C 0.56 5.43 7.60 86.73 0.66 6.08 16 10 O -0.53 -7.90 12.77 -3.96 -0.05 -7.95 16 11 N -0.65 -4.60 4.48 -305.69 -1.37 -5.98 16 12 C 0.18 1.14 6.30 38.63 0.24 1.39 16 13 C -0.18 -0.36 5.89 -19.98 -0.12 -0.48 16 14 C 0.56 1.58 7.71 86.69 0.67 2.25 16 15 O -0.57 -4.94 13.65 -4.01 -0.05 -4.99 16 16 N -0.70 2.70 5.03 -445.72 -2.24 0.46 16 17 C 0.14 -0.37 2.45 44.99 0.11 -0.25 16 18 H 0.07 0.22 7.58 -2.39 -0.02 0.20 16 19 C -0.11 0.73 5.39 30.59 0.16 0.89 16 20 C -0.11 0.26 5.57 30.59 0.17 0.43 16 21 C 0.10 -0.26 3.47 30.60 0.11 -0.15 16 22 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 23 O -0.59 -0.56 13.32 -148.98 -1.98 -2.54 16 24 C -0.14 0.34 5.54 30.59 0.17 0.51 16 25 C -0.12 0.34 5.50 30.59 0.17 0.50 16 26 C -0.06 0.27 9.52 22.51 0.21 0.49 16 27 C -0.14 0.64 10.02 22.24 0.22 0.87 16 28 C -0.07 0.04 10.03 22.29 0.22 0.27 16 29 C -0.15 -0.84 8.68 22.37 0.19 -0.65 16 30 C -0.08 -0.27 9.51 22.58 0.21 -0.05 16 31 C 0.10 0.35 7.23 22.33 0.16 0.51 16 32 F -0.13 -0.87 16.73 44.97 0.75 -0.12 16 33 H 0.40 -4.00 8.70 -74.05 -0.64 -4.64 16 34 H 0.11 0.10 7.89 -2.39 -0.02 0.08 16 35 H -0.28 -0.25 7.11 99.48 0.71 0.45 16 36 H -0.29 -0.87 7.11 99.48 0.71 -0.16 16 37 H 0.19 -1.59 5.11 -2.91 -0.01 -1.60 16 38 H 0.42 2.28 4.63 -92.71 -0.43 1.85 16 39 H 0.42 -4.26 6.66 -92.71 -0.62 -4.88 16 40 H 0.08 -0.57 8.14 -2.38 -0.02 -0.59 16 41 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 42 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 43 H 0.08 -0.18 8.14 -2.38 -0.02 -0.20 16 44 H 0.39 -2.65 9.08 -74.06 -0.67 -3.32 16 45 H 0.05 0.09 8.14 -2.39 -0.02 0.07 16 46 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 47 H 0.08 -0.49 8.14 -2.38 -0.02 -0.51 16 48 H 0.05 0.07 8.14 -2.38 -0.02 0.05 16 49 H 0.17 -2.03 6.44 -2.91 -0.02 -2.05 16 50 H 0.16 -1.77 8.06 -2.91 -0.02 -1.80 16 51 H 0.15 -0.73 8.06 -2.91 -0.02 -0.76 16 52 H 0.13 1.14 6.23 -2.91 -0.02 1.12 16 53 H 0.16 0.27 6.41 -2.91 -0.02 0.25 16 Total: 0.00 -27.76 436.58 -1.51 -29.28 By element: Atomic # 1 Polarization: -16.86 SS G_CDS: -1.28 Total: -18.14 kcal Atomic # 6 Polarization: 9.09 SS G_CDS: 3.88 Total: 12.97 kcal Atomic # 7 Polarization: -1.90 SS G_CDS: -3.61 Total: -5.51 kcal Atomic # 8 Polarization: -13.00 SS G_CDS: -4.01 Total: -17.01 kcal Atomic # 9 Polarization: -1.83 SS G_CDS: 1.45 Total: -0.37 kcal Atomic # 14 Polarization: -3.27 SS G_CDS: 2.05 Total: -1.22 kcal Total: -27.76 -1.51 -29.28 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_12360598.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.463 kcal (2) G-P(sol) polarization free energy of solvation -27.765 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.278 kcal (6) G-S(sol) free energy of system = (1) + (5) -176.741 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.05 seconds