Wall clock time and date at job start Sat Mar 6 2021 16:11:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86296 * 109.47351 * 2 1 4 4 C 1.50695 * 109.46957 * 120.00283 * 2 1 3 5 5 C 1.38633 * 119.93886 * 194.97182 * 4 2 1 6 6 F 1.35097 * 119.87933 * 359.97438 * 5 4 2 7 7 C 1.38685 * 120.24433 * 179.97438 * 5 4 2 8 8 C 1.37813 * 120.11893 * 359.74828 * 7 5 4 9 9 C 1.39694 * 119.87591 * 0.52707 * 8 7 5 10 10 C 1.47678 * 120.12007 * 179.74467 * 9 8 7 11 11 O 1.21567 * 120.00367 * 179.72188 * 10 9 8 12 12 N 1.34781 * 119.99938 * 359.73149 * 10 9 8 13 13 C 1.39200 * 119.99733 * 185.41146 * 12 10 9 14 14 C 1.40289 * 120.16388 * 136.88265 * 13 12 10 15 15 C 1.47511 * 120.20307 * 359.97438 * 14 13 12 16 16 O 1.21590 * 119.99685 * 358.02964 * 15 14 13 17 17 N 1.34772 * 119.99849 * 178.30881 * 15 14 13 18 18 C 1.46505 * 119.99787 * 179.72528 * 17 15 14 19 19 H 1.09004 * 109.47151 * 324.99254 * 18 17 15 20 20 C 1.52999 * 109.47282 * 84.99555 * 18 17 15 21 21 C 1.52998 * 109.46843 * 179.97438 * 20 18 17 22 22 C 1.52999 * 109.47568 * 299.99908 * 21 20 18 23 23 H 1.09000 * 109.47370 * 300.00385 * 22 21 20 24 24 O 1.42900 * 109.47058 * 179.97438 * 22 21 20 25 25 C 1.53002 * 109.46489 * 60.00377 * 22 21 20 26 26 C 1.53000 * 109.46900 * 204.99969 * 18 17 15 27 27 C 1.39694 * 119.59641 * 179.72172 * 14 13 12 28 28 C 1.37790 * 119.92149 * 0.24657 * 27 14 13 29 29 C 1.38570 * 120.33914 * 0.02562 * 28 27 14 30 30 C 1.38009 * 120.40716 * 359.97438 * 29 28 27 31 31 C 1.37854 * 119.93955 * 14.99576 * 4 2 1 32 32 H 0.96701 * 114.00072 * 300.00287 * 1 2 3 33 33 H 1.09000 * 109.46490 * 239.99924 * 2 1 3 34 34 H 1.48499 * 110.00153 * 300.00346 * 3 2 1 35 35 H 1.48504 * 109.99848 * 61.32041 * 3 2 1 36 36 H 1.07997 * 119.94010 * 179.97438 * 7 5 4 37 37 H 1.07997 * 120.06307 * 180.25227 * 8 7 5 38 38 H 0.97000 * 120.00063 * 5.39915 * 12 10 9 39 39 H 0.97002 * 120.00292 * 359.71947 * 17 15 14 40 40 H 1.08999 * 109.47116 * 300.00494 * 20 18 17 41 41 H 1.09000 * 109.46898 * 60.00079 * 20 18 17 42 42 H 1.09006 * 109.46815 * 179.97438 * 21 20 18 43 43 H 1.09000 * 109.47089 * 60.00465 * 21 20 18 44 44 H 0.96705 * 113.99700 * 60.00664 * 24 22 21 45 45 H 1.09004 * 109.46660 * 179.97438 * 25 22 21 46 46 H 1.08991 * 109.47584 * 59.99968 * 25 22 21 47 47 H 1.09003 * 109.47330 * 299.99335 * 26 18 17 48 48 H 1.08998 * 109.47478 * 59.99395 * 26 18 17 49 49 H 1.07997 * 120.03426 * 180.23117 * 27 14 13 50 50 H 1.08005 * 119.83342 * 179.97438 * 28 27 14 51 51 H 1.07998 * 119.79723 * 179.97438 * 29 28 27 52 52 H 1.07998 * 119.96904 * 180.02562 * 30 29 28 53 53 H 1.07995 * 120.06100 * 359.97438 * 31 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 3.2561 -0.5744 1.6155 6 9 4.0935 0.1947 0.8859 7 6 3.7250 -1.2250 2.7470 8 6 2.8738 -2.0066 3.4979 9 6 1.5393 -2.1518 3.1112 10 6 0.6240 -2.9926 3.9087 11 8 -0.5382 -3.1135 3.5731 12 7 1.0770 -3.6260 5.0088 13 6 0.2467 -4.5067 5.6963 14 6 0.7469 -5.7346 6.1547 15 6 2.1550 -6.1000 5.9104 16 8 2.8764 -5.3520 5.2792 17 7 2.6403 -7.2655 6.3821 18 6 4.0372 -7.6311 6.1343 19 1 4.3380 -7.2712 5.1503 20 6 4.9280 -6.9962 7.2039 21 6 6.3867 -7.3786 6.9454 22 6 6.5321 -8.9007 6.9985 23 1 6.2311 -9.2604 7.9824 24 8 7.8944 -9.2578 6.7565 25 6 5.6412 -9.5356 5.9288 26 6 4.1829 -9.1532 6.1869 27 6 -0.0952 -6.6069 6.8484 28 6 -1.4096 -6.2598 7.0735 29 6 -1.9020 -5.0486 6.6145 30 6 -1.0822 -4.1764 5.9276 31 6 1.0727 -1.4948 1.9706 32 1 -0.3933 0.4417 0.7650 33 1 1.7923 -0.5139 -0.8900 34 1 1.5616 2.4679 -1.2084 35 1 1.5880 2.4585 1.2243 36 1 4.7580 -1.1159 3.0423 37 1 3.2389 -2.5095 4.3812 38 1 1.9816 -3.4682 5.3214 39 1 2.0648 -7.8622 6.8857 40 1 4.8241 -5.9118 7.1665 41 1 4.6273 -7.3562 8.1878 42 1 7.0215 -6.9258 7.7072 43 1 6.6878 -7.0189 5.9615 44 1 8.5175 -8.8892 7.3976 45 1 5.7451 -10.6200 5.9663 46 1 5.9422 -9.1759 4.9449 47 1 3.8822 -9.5133 7.1708 48 1 3.5482 -9.6056 5.4249 49 1 0.2834 -7.5524 7.2077 50 1 -2.0595 -6.9355 7.6097 51 1 -2.9337 -4.7855 6.7954 52 1 -1.4734 -3.2341 5.5734 53 1 0.0409 -1.6001 1.6698 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11560734_12496548.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:11:25 Heat of formation + Delta-G solvation = -135.961971 kcal Electronic energy + Delta-G solvation = -39891.005514 eV Core-core repulsion = 34608.467119 eV Total energy + Delta-G solvation = -5282.538395 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.167 amu Computer time = 1.77 seconds Orbital eigenvalues (eV) -50.34311 -42.23847 -41.23420 -40.32706 -39.61238 -38.93984 -37.86621 -37.05833 -36.05210 -34.57839 -33.03437 -32.33247 -32.21083 -31.86729 -30.53854 -29.24676 -27.21425 -25.66052 -25.02083 -23.86722 -23.69871 -23.33246 -22.81910 -21.81185 -21.30456 -21.03342 -19.62575 -19.10396 -18.67664 -18.47784 -18.18684 -17.95185 -17.51845 -17.45626 -17.11547 -16.68294 -16.54527 -16.34497 -16.05888 -15.94145 -15.73135 -15.62070 -15.47837 -15.42395 -15.21804 -15.03379 -14.75654 -14.53628 -14.41590 -14.28221 -14.15440 -13.99781 -13.70307 -13.43884 -13.35185 -13.24722 -13.09966 -12.94523 -12.90962 -12.63045 -12.51168 -12.43269 -12.16842 -12.01076 -11.74156 -11.60461 -11.36864 -11.28089 -11.08936 -10.89427 -10.74696 -10.26233 -10.15759 -9.97800 -9.86283 -9.35174 -4.85632 -0.66924 -0.26145 -0.05860 0.24867 1.12995 1.45483 1.51005 1.74317 1.83786 1.87040 1.99983 2.46182 2.76958 2.87660 3.10764 3.25452 3.27736 3.43553 3.55407 3.59156 3.63864 3.72354 3.73795 3.90154 4.02326 4.03059 4.04888 4.12261 4.21379 4.29699 4.30927 4.33291 4.36226 4.37521 4.42691 4.44520 4.49726 4.66116 4.72070 4.79688 4.81411 4.88653 4.93570 4.96152 4.97847 5.03393 5.07693 5.11045 5.12673 5.20193 5.24950 5.30901 5.33397 5.43399 5.45762 5.53185 5.83988 6.17736 6.30980 6.44193 6.84416 6.88012 7.09939 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.079 4.079 3 Si 0.746 3.254 4 C -0.161 4.161 5 C 0.126 3.874 6 F -0.097 7.097 7 C -0.142 4.142 8 C -0.046 4.046 9 C -0.155 4.155 10 C 0.560 3.440 11 O -0.553 6.553 12 N -0.649 5.649 13 C 0.179 3.821 14 C -0.177 4.177 15 C 0.563 3.437 16 O -0.568 6.568 17 N -0.706 5.706 18 C 0.146 3.854 19 H 0.068 0.932 20 C -0.120 4.120 21 C -0.144 4.144 22 C 0.102 3.898 23 H 0.070 0.930 24 O -0.590 6.590 25 C -0.112 4.112 26 C -0.115 4.115 27 C -0.062 4.062 28 C -0.133 4.133 29 C -0.076 4.076 30 C -0.144 4.144 31 C -0.032 4.032 32 H 0.387 0.613 33 H 0.135 0.865 34 H -0.287 1.287 35 H -0.283 1.283 36 H 0.179 0.821 37 H 0.156 0.844 38 H 0.425 0.575 39 H 0.415 0.585 40 H 0.057 0.943 41 H 0.081 0.919 42 H 0.079 0.921 43 H 0.058 0.942 44 H 0.394 0.606 45 H 0.076 0.924 46 H 0.058 0.942 47 H 0.093 0.907 48 H 0.081 0.919 49 H 0.165 0.835 50 H 0.163 0.837 51 H 0.150 0.850 52 H 0.122 0.878 53 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.247 -4.105 8.552 10.027 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.188 4.188 3 Si 0.649 3.351 4 C -0.163 4.163 5 C 0.106 3.894 6 F -0.075 7.075 7 C -0.160 4.160 8 C -0.064 4.064 9 C -0.158 4.158 10 C 0.351 3.649 11 O -0.432 6.432 12 N -0.298 5.298 13 C 0.083 3.917 14 C -0.182 4.182 15 C 0.352 3.648 16 O -0.449 6.449 17 N -0.357 5.357 18 C 0.041 3.959 19 H 0.086 0.914 20 C -0.158 4.158 21 C -0.182 4.182 22 C 0.044 3.956 23 H 0.088 0.912 24 O -0.399 6.399 25 C -0.150 4.150 26 C -0.153 4.153 27 C -0.081 4.081 28 C -0.151 4.151 29 C -0.094 4.094 30 C -0.164 4.164 31 C -0.051 4.051 32 H 0.237 0.763 33 H 0.152 0.848 34 H -0.214 1.214 35 H -0.209 1.209 36 H 0.196 0.804 37 H 0.174 0.826 38 H 0.268 0.732 39 H 0.253 0.747 40 H 0.076 0.924 41 H 0.100 0.900 42 H 0.097 0.903 43 H 0.076 0.924 44 H 0.244 0.756 45 H 0.095 0.905 46 H 0.076 0.924 47 H 0.112 0.888 48 H 0.100 0.900 49 H 0.182 0.818 50 H 0.181 0.819 51 H 0.168 0.832 52 H 0.140 0.860 53 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 2.657 -3.438 6.772 8.046 hybrid contribution -0.738 0.330 0.840 1.166 sum 1.919 -3.109 7.612 8.443 Atomic orbital electron populations 1.86573 1.17818 1.80479 1.50312 1.25105 0.84066 1.11651 0.97939 0.94039 0.91604 0.71698 0.77721 1.20334 0.93383 1.02386 1.00170 1.17729 0.86889 0.93042 0.91690 1.91206 1.69416 1.71054 1.75832 1.21394 1.02979 0.97855 0.93766 1.21433 0.90806 0.94989 0.99217 1.19801 0.95030 1.02619 0.98381 1.18533 0.87211 0.79079 0.80101 1.90790 1.18762 1.63261 1.70416 1.43321 1.18047 1.42102 1.26305 1.17835 0.91352 0.88955 0.93591 1.19915 0.94905 0.95008 1.08382 1.18202 0.86593 0.81771 0.78248 1.90639 1.60501 1.51853 1.41922 1.45810 1.12943 1.20639 1.56300 1.21022 0.80104 0.95525 0.99205 0.91371 1.21789 0.94045 1.00623 0.99381 1.22173 0.96832 0.96534 1.02700 1.21913 0.81878 0.93183 0.98636 0.91190 1.86489 1.17940 1.77177 1.58290 1.21413 0.93542 1.01398 0.98683 1.21698 0.96188 0.92944 1.04469 1.21541 0.93373 0.98635 0.94558 1.21518 0.95806 0.97137 1.00669 1.21602 1.00583 0.93447 0.93805 1.21246 0.92883 1.01732 1.00577 1.20871 1.00676 0.91894 0.91631 0.76293 0.84774 1.21397 1.20922 0.80386 0.82607 0.73247 0.74706 0.92405 0.90005 0.90251 0.92365 0.75640 0.90544 0.92355 0.88843 0.90044 0.81782 0.81917 0.83218 0.85989 0.84101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.94 11.64 -148.98 -1.73 -4.68 16 2 C -0.08 -0.21 2.96 71.23 0.21 0.00 16 3 Si 0.75 1.48 29.57 68.60 2.03 3.51 16 4 C -0.16 -0.48 5.13 -19.86 -0.10 -0.58 16 5 C 0.13 0.02 6.67 22.47 0.15 0.17 16 6 F -0.10 0.17 13.71 44.97 0.62 0.79 16 7 C -0.14 0.31 10.01 22.28 0.22 0.53 16 8 C -0.05 -0.01 9.53 22.52 0.21 0.21 16 9 C -0.16 -0.85 5.87 -20.09 -0.12 -0.97 16 10 C 0.56 5.29 7.58 86.74 0.66 5.95 16 11 O -0.55 -8.55 14.27 -3.93 -0.06 -8.60 16 12 N -0.65 -3.95 4.26 -305.67 -1.30 -5.26 16 13 C 0.18 1.05 6.16 38.62 0.24 1.29 16 14 C -0.18 -0.28 5.89 -19.98 -0.12 -0.39 16 15 C 0.56 1.10 7.73 86.69 0.67 1.77 16 16 O -0.57 -3.99 13.76 -4.00 -0.06 -4.05 16 17 N -0.71 3.17 5.03 -445.72 -2.24 0.93 16 18 C 0.15 -0.51 2.45 44.99 0.11 -0.40 16 19 H 0.07 0.14 7.58 -2.38 -0.02 0.12 16 20 C -0.12 0.51 5.50 30.59 0.17 0.67 16 21 C -0.14 0.56 5.54 30.59 0.17 0.73 16 22 C 0.10 -0.36 3.47 30.59 0.11 -0.25 16 23 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 24 O -0.59 0.04 13.32 -148.98 -1.98 -1.94 16 25 C -0.11 0.34 5.57 30.58 0.17 0.51 16 26 C -0.12 0.79 5.39 30.58 0.16 0.95 16 27 C -0.06 0.29 9.53 22.52 0.21 0.51 16 28 C -0.13 0.63 10.02 22.24 0.22 0.85 16 29 C -0.08 0.04 10.03 22.29 0.22 0.27 16 30 C -0.14 -0.78 8.66 22.37 0.19 -0.58 16 31 C -0.03 -0.19 8.78 22.52 0.20 0.01 16 32 H 0.39 0.00 8.43 -74.06 -0.62 -0.62 16 33 H 0.13 0.12 7.96 -2.39 -0.02 0.10 16 34 H -0.29 -2.35 7.11 99.48 0.71 -1.64 16 35 H -0.28 -1.82 7.11 99.48 0.71 -1.11 16 36 H 0.18 -1.42 8.06 -2.91 -0.02 -1.45 16 37 H 0.16 -0.48 6.41 -2.91 -0.02 -0.50 16 38 H 0.42 1.39 5.00 -92.71 -0.46 0.93 16 39 H 0.41 -4.37 6.64 -92.71 -0.62 -4.98 16 40 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 41 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 42 H 0.08 -0.46 8.14 -2.38 -0.02 -0.48 16 43 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 44 H 0.39 -3.07 9.08 -74.05 -0.67 -3.75 16 45 H 0.08 -0.21 8.14 -2.38 -0.02 -0.23 16 46 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 47 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 48 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 49 H 0.16 -2.04 6.41 -2.91 -0.02 -2.06 16 50 H 0.16 -1.74 8.06 -2.91 -0.02 -1.77 16 51 H 0.15 -0.70 8.06 -2.91 -0.02 -0.72 16 52 H 0.12 1.01 6.79 -2.91 -0.02 0.99 16 53 H 0.14 1.12 6.66 -2.91 -0.02 1.10 16 Total: 0.00 -24.77 430.65 -2.08 -26.85 By element: Atomic # 1 Polarization: -17.47 SS G_CDS: -1.32 Total: -18.79 kcal Atomic # 6 Polarization: 7.27 SS G_CDS: 3.97 Total: 11.24 kcal Atomic # 7 Polarization: -0.78 SS G_CDS: -3.54 Total: -4.33 kcal Atomic # 8 Polarization: -15.44 SS G_CDS: -3.83 Total: -19.27 kcal Atomic # 9 Polarization: 0.17 SS G_CDS: 0.62 Total: 0.79 kcal Atomic # 14 Polarization: 1.48 SS G_CDS: 2.03 Total: 3.51 kcal Total: -24.77 -2.08 -26.85 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_12496548.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.111 kcal (2) G-P(sol) polarization free energy of solvation -24.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.883 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.851 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.962 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.77 seconds