Wall clock time and date at job start Sat Mar 6 2021 16:12:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86296 * 109.47345 * 2 1 4 4 C 1.50703 * 109.46886 * 240.00009 * 2 1 3 5 5 C 1.38347 * 120.35227 * 300.26299 * 4 2 1 6 6 C 1.40035 * 118.28886 * 180.28005 * 5 4 2 7 7 C 1.47799 * 120.56127 * 179.73401 * 6 5 4 8 8 O 1.21546 * 120.00074 * 359.72363 * 7 6 5 9 9 N 1.34787 * 119.99813 * 179.72636 * 7 6 5 10 10 C 1.39195 * 119.99355 * 185.28188 * 9 7 6 11 11 C 1.40292 * 120.16123 * 214.65002 * 10 9 7 12 12 C 1.47508 * 120.20233 * 359.97438 * 11 10 9 13 13 O 1.21597 * 119.99859 * 354.73714 * 12 11 10 14 14 N 1.34781 * 119.99874 * 174.73980 * 12 11 10 15 15 C 1.46498 * 119.99421 * 180.02562 * 14 12 11 16 16 H 1.08997 * 109.47518 * 35.00166 * 15 14 12 17 17 C 1.53006 * 109.46700 * 154.99752 * 15 14 12 18 18 C 1.52999 * 109.46878 * 179.97438 * 17 15 14 19 19 C 1.52999 * 109.47170 * 299.99867 * 18 17 15 20 20 H 1.09002 * 109.47135 * 300.00141 * 19 18 17 21 21 O 1.42908 * 109.47532 * 180.02562 * 19 18 17 22 22 C 1.52996 * 109.47049 * 60.00157 * 19 18 17 23 23 C 1.52999 * 109.47120 * 274.99479 * 15 14 12 24 24 C 1.39689 * 119.59787 * 179.70789 * 11 10 9 25 25 C 1.37795 * 119.92061 * 0.27214 * 24 11 10 26 26 C 1.38569 * 120.33752 * 0.02562 * 25 24 11 27 27 C 1.38000 * 120.40961 * 0.02562 * 26 25 24 28 28 C 1.39548 * 118.87789 * 359.46704 * 6 5 4 29 29 N 1.31686 * 120.56072 * 0.26844 * 28 6 5 30 30 C 1.31922 * 121.88453 * 0.02562 * 29 28 6 31 31 H 0.96694 * 113.99867 * 300.00508 * 1 2 3 32 32 H 1.08996 * 109.46875 * 120.00431 * 2 1 3 33 33 H 1.48494 * 110.00086 * 300.00500 * 3 2 1 34 34 H 1.48509 * 109.99814 * 61.31683 * 3 2 1 35 35 H 1.08004 * 120.85286 * 0.04455 * 5 4 2 36 36 H 0.96992 * 119.99927 * 5.28358 * 9 7 6 37 37 H 0.97000 * 120.00182 * 359.97438 * 14 12 11 38 38 H 1.09002 * 109.47232 * 59.99809 * 17 15 14 39 39 H 1.08998 * 109.47209 * 299.99722 * 17 15 14 40 40 H 1.08997 * 109.47290 * 60.00445 * 18 17 15 41 41 H 1.09004 * 109.47324 * 180.02562 * 18 17 15 42 42 H 0.96690 * 114.00659 * 180.02562 * 21 19 18 43 43 H 1.09002 * 109.47165 * 60.00002 * 22 19 18 44 44 H 1.09003 * 109.47584 * 179.97438 * 22 19 18 45 45 H 1.09000 * 109.47271 * 60.00489 * 23 15 14 46 46 H 1.09002 * 109.47135 * 300.00390 * 23 15 14 47 47 H 1.07999 * 120.03803 * 180.25335 * 24 11 10 48 48 H 1.08009 * 119.83059 * 180.02562 * 25 24 11 49 49 H 1.08000 * 119.79540 * 179.97438 * 26 25 24 50 50 H 1.08003 * 119.96852 * 179.97438 * 27 26 25 51 51 H 1.08004 * 119.71901 * 180.25275 * 28 6 5 52 52 H 1.08001 * 119.45680 * 180.02562 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5971 -2.0333 -1.4594 6 6 2.0923 -2.6528 -2.6135 7 6 1.7715 -4.0659 -2.9045 8 8 1.0764 -4.7018 -2.1365 9 7 2.2498 -4.6493 -4.0214 10 6 1.8592 -5.9437 -4.3522 11 6 2.7637 -6.8146 -4.9782 12 6 4.1331 -6.3637 -5.2899 13 8 4.4521 -5.2071 -5.0925 14 7 5.0308 -7.2338 -5.7937 15 6 6.3910 -6.7860 -6.1027 16 1 6.7026 -6.0396 -5.3722 17 6 7.3454 -7.9807 -6.0500 18 6 8.7659 -7.5132 -6.3734 19 6 8.7942 -6.8993 -7.7746 20 1 8.4823 -7.6460 -8.5048 21 8 10.1210 -6.4632 -8.0770 22 6 7.8397 -5.7047 -7.8273 23 6 6.4197 -6.1717 -7.5037 24 6 2.3612 -8.1131 -5.2993 25 6 1.0806 -8.5283 -5.0056 26 6 0.1877 -7.6636 -4.3929 27 6 0.5704 -6.3775 -4.0705 28 6 2.8893 -1.9117 -3.4870 29 7 3.1752 -0.6527 -3.2277 30 6 2.7276 -0.0451 -2.1457 31 1 -0.3933 0.4417 0.7650 32 1 1.7923 -0.5139 0.8899 33 1 1.5615 2.4679 -1.2084 34 1 1.5879 2.4585 1.2243 35 1 0.9734 -2.5753 -0.7639 36 1 2.8660 -4.1671 -4.5946 37 1 4.7764 -8.1566 -5.9508 38 1 7.0338 -8.7273 -6.7806 39 1 7.3250 -8.4184 -5.0520 40 1 9.0778 -6.7666 -5.6432 41 1 9.4458 -8.3644 -6.3364 42 1 10.2135 -6.0622 -8.9519 43 1 8.1516 -4.9580 -7.0970 44 1 7.8602 -5.2670 -8.8253 45 1 5.7397 -5.3206 -7.5413 46 1 6.1081 -6.9183 -8.2342 47 1 3.0529 -8.7908 -5.7776 48 1 0.7711 -9.5328 -5.2542 49 1 -0.8140 -7.9981 -4.1670 50 1 -0.1314 -5.7094 -3.5934 51 1 3.2752 -2.3748 -4.3832 52 1 2.9860 0.9891 -1.9721 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11560734_13287814.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:12:59 Heat of formation + Delta-G solvation = -81.513402 kcal Electronic energy + Delta-G solvation = -37115.271074 eV Core-core repulsion = 32239.121811 eV Total energy + Delta-G solvation = -4876.149263 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.172 amu Computer time = 1.87 seconds Orbital eigenvalues (eV) -42.42709 -41.59263 -40.75962 -39.77050 -38.98072 -38.05506 -37.09022 -36.11465 -34.60847 -33.97624 -33.48467 -32.33882 -31.87098 -30.69585 -29.26648 -27.37068 -26.26736 -25.08850 -24.08837 -23.87313 -23.63794 -22.85475 -21.91766 -21.30422 -21.04513 -19.43258 -19.03363 -18.74228 -18.43089 -18.18623 -18.13770 -17.51786 -17.38254 -16.81280 -16.57066 -16.46692 -16.09274 -15.85391 -15.69852 -15.59048 -15.48600 -15.38177 -15.02995 -14.84672 -14.74051 -14.49672 -14.38809 -14.18579 -14.14957 -13.93425 -13.72497 -13.35741 -13.25223 -13.16085 -12.95212 -12.77801 -12.61994 -12.44194 -12.17203 -12.14972 -11.77250 -11.74219 -11.51459 -11.28699 -11.21099 -10.98012 -10.82785 -10.75965 -10.64417 -10.31739 -10.29012 -9.98984 -9.31167 -4.96707 -0.77977 -0.27308 -0.12200 0.24610 1.18822 1.48207 1.56920 1.71359 1.76591 1.91729 1.98045 2.46216 2.77635 2.95943 3.13521 3.27325 3.47333 3.49344 3.54478 3.57739 3.62471 3.66067 3.71225 3.72201 4.01167 4.02582 4.07766 4.11545 4.12293 4.21266 4.28802 4.30211 4.33258 4.34259 4.41932 4.42843 4.44235 4.65511 4.71706 4.78471 4.82010 4.88616 4.95674 5.01927 5.03239 5.10475 5.12505 5.16649 5.22357 5.24614 5.28991 5.31454 5.43113 5.44623 5.82689 6.11480 6.41626 6.49940 6.54512 6.74199 6.87790 7.08105 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.085 4.085 3 Si 0.769 3.231 4 C -0.136 4.136 5 C 0.005 3.995 6 C -0.200 4.200 7 C 0.566 3.434 8 O -0.545 6.545 9 N -0.651 5.651 10 C 0.184 3.816 11 C -0.182 4.182 12 C 0.565 3.435 13 O -0.574 6.574 14 N -0.703 5.703 15 C 0.145 3.855 16 H 0.068 0.932 17 C -0.114 4.114 18 C -0.112 4.112 19 C 0.103 3.897 20 H 0.071 0.929 21 O -0.590 6.590 22 C -0.145 4.145 23 C -0.121 4.121 24 C -0.057 4.057 25 C -0.136 4.136 26 C -0.070 4.070 27 C -0.152 4.152 28 C 0.147 3.853 29 N -0.491 5.491 30 C 0.132 3.868 31 H 0.400 0.600 32 H 0.104 0.896 33 H -0.290 1.290 34 H -0.276 1.276 35 H 0.146 0.854 36 H 0.426 0.574 37 H 0.416 0.584 38 H 0.094 0.906 39 H 0.082 0.918 40 H 0.058 0.942 41 H 0.077 0.923 42 H 0.394 0.606 43 H 0.056 0.944 44 H 0.078 0.922 45 H 0.055 0.945 46 H 0.083 0.917 47 H 0.167 0.833 48 H 0.165 0.835 49 H 0.151 0.849 50 H 0.122 0.878 51 H 0.175 0.825 52 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.873 -4.459 -2.616 5.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.193 4.193 3 Si 0.672 3.328 4 C -0.138 4.138 5 C -0.021 4.021 6 C -0.205 4.205 7 C 0.355 3.645 8 O -0.423 6.423 9 N -0.301 5.301 10 C 0.087 3.913 11 C -0.188 4.188 12 C 0.354 3.646 13 O -0.455 6.455 14 N -0.354 5.354 15 C 0.040 3.960 16 H 0.086 0.914 17 C -0.152 4.152 18 C -0.150 4.150 19 C 0.044 3.956 20 H 0.089 0.911 21 O -0.399 6.399 22 C -0.183 4.183 23 C -0.159 4.159 24 C -0.076 4.076 25 C -0.154 4.154 26 C -0.089 4.089 27 C -0.173 4.173 28 C -0.012 4.012 29 N -0.199 5.199 30 C -0.024 4.024 31 H 0.251 0.749 32 H 0.122 0.878 33 H -0.217 1.217 34 H -0.202 1.202 35 H 0.164 0.836 36 H 0.272 0.728 37 H 0.254 0.746 38 H 0.113 0.887 39 H 0.101 0.899 40 H 0.076 0.924 41 H 0.096 0.904 42 H 0.243 0.757 43 H 0.075 0.925 44 H 0.097 0.903 45 H 0.073 0.927 46 H 0.102 0.898 47 H 0.184 0.816 48 H 0.182 0.818 49 H 0.169 0.831 50 H 0.140 0.860 51 H 0.192 0.808 52 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 2.192 -3.284 -2.491 4.668 hybrid contribution -1.817 -0.211 0.397 1.872 sum 0.375 -3.495 -2.094 4.091 Atomic orbital electron populations 1.86535 1.18066 1.80930 1.51367 1.25000 0.84519 1.12533 0.97256 0.94143 0.90002 0.71131 0.77558 1.20532 1.00385 0.94354 0.98515 1.21651 0.92591 0.93785 0.94082 1.20836 1.05458 0.94467 0.99747 1.18332 0.79023 0.86613 0.80560 1.90781 1.38613 1.64869 1.48058 1.43648 1.47261 1.14193 1.25029 1.17891 0.92755 0.84391 0.96267 1.19790 0.93158 0.96039 1.09803 1.18229 0.84902 0.85225 0.76231 1.90565 1.79982 1.19479 1.55494 1.45775 1.11474 1.13941 1.64235 1.21040 0.80793 0.97345 0.96776 0.91394 1.21706 0.92787 0.96743 1.03983 1.21424 0.96908 1.01150 0.95547 1.21913 0.81642 0.94836 0.97171 0.91095 1.86483 1.29717 1.82486 1.41193 1.22171 0.94837 0.98609 1.02707 1.21786 0.96558 1.01085 0.96491 1.21538 0.97378 0.92597 0.96051 1.21513 0.93099 1.01565 0.99270 1.21589 1.01243 0.91851 0.94228 1.21197 0.94132 0.98746 1.03206 1.23270 0.90795 0.89538 0.97557 1.67811 1.22184 1.10268 1.19591 1.23267 0.91057 1.00444 0.87616 0.74872 0.87796 1.21717 1.20240 0.83622 0.72816 0.74550 0.88726 0.89923 0.92365 0.90404 0.75650 0.92478 0.90314 0.92662 0.89838 0.81605 0.81775 0.83136 0.86040 0.80763 0.79682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.18 12.75 -148.98 -1.90 -3.08 16 2 C -0.08 0.07 2.83 71.24 0.20 0.27 16 3 Si 0.77 -2.66 29.82 68.60 2.05 -0.61 16 4 C -0.14 -0.53 5.43 -19.81 -0.11 -0.63 16 5 C 0.01 0.04 9.31 22.73 0.21 0.25 16 6 C -0.20 -1.65 5.89 -20.00 -0.12 -1.77 16 7 C 0.57 6.20 7.50 86.77 0.65 6.85 16 8 O -0.54 -8.70 14.21 -3.86 -0.05 -8.76 16 9 N -0.65 -5.34 4.65 -305.57 -1.42 -6.76 16 10 C 0.18 1.32 6.25 38.63 0.24 1.56 16 11 C -0.18 -0.45 5.89 -19.98 -0.12 -0.57 16 12 C 0.57 1.78 7.72 86.69 0.67 2.45 16 13 O -0.57 -5.05 13.55 -4.02 -0.05 -5.10 16 14 N -0.70 2.53 5.03 -445.72 -2.24 0.29 16 15 C 0.14 -0.36 2.45 44.99 0.11 -0.25 16 16 H 0.07 0.22 7.58 -2.39 -0.02 0.20 16 17 C -0.11 0.72 5.39 30.60 0.16 0.88 16 18 C -0.11 0.28 5.57 30.59 0.17 0.45 16 19 C 0.10 -0.27 3.47 30.59 0.11 -0.17 16 20 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 21 O -0.59 -0.43 13.32 -148.98 -1.98 -2.41 16 22 C -0.14 0.36 5.54 30.58 0.17 0.53 16 23 C -0.12 0.34 5.49 30.58 0.17 0.50 16 24 C -0.06 0.24 9.52 22.52 0.21 0.46 16 25 C -0.14 0.60 10.02 22.24 0.22 0.82 16 26 C -0.07 0.00 10.03 22.29 0.22 0.22 16 27 C -0.15 -0.98 8.63 22.37 0.19 -0.79 16 28 C 0.15 0.93 10.71 85.03 0.91 1.84 16 29 N -0.49 -3.35 10.34 -194.73 -2.01 -5.37 16 30 C 0.13 0.46 9.84 84.71 0.83 1.29 16 31 H 0.40 -2.54 8.74 -74.06 -0.65 -3.19 16 32 H 0.10 -0.51 7.96 -2.39 -0.02 -0.53 16 33 H -0.29 -0.98 7.11 99.48 0.71 -0.27 16 34 H -0.28 -0.06 7.11 99.48 0.71 0.65 16 35 H 0.15 1.17 7.74 -2.91 -0.02 1.15 16 36 H 0.43 2.85 4.37 -92.71 -0.40 2.44 16 37 H 0.42 -4.15 6.66 -92.71 -0.62 -4.77 16 38 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 39 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 40 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 41 H 0.08 -0.19 8.14 -2.38 -0.02 -0.20 16 42 H 0.39 -2.73 9.08 -74.06 -0.67 -3.40 16 43 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 44 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 45 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 46 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 47 H 0.17 -2.03 6.44 -2.91 -0.02 -2.05 16 48 H 0.16 -1.74 8.06 -2.91 -0.02 -1.76 16 49 H 0.15 -0.64 8.06 -2.91 -0.02 -0.66 16 50 H 0.12 1.18 6.53 -2.91 -0.02 1.16 16 51 H 0.18 0.53 6.44 -2.91 -0.02 0.51 16 52 H 0.19 -0.42 4.88 -2.91 -0.01 -0.43 16 Total: 0.00 -27.67 421.17 -3.79 -31.45 By element: Atomic # 1 Polarization: -12.57 SS G_CDS: -1.28 Total: -13.85 kcal Atomic # 6 Polarization: 9.09 SS G_CDS: 5.12 Total: 14.20 kcal Atomic # 7 Polarization: -6.17 SS G_CDS: -5.68 Total: -11.84 kcal Atomic # 8 Polarization: -15.36 SS G_CDS: -3.99 Total: -19.35 kcal Atomic # 14 Polarization: -2.66 SS G_CDS: 2.05 Total: -0.61 kcal Total: -27.67 -3.79 -31.45 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11560734_13287814.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.062 kcal (2) G-P(sol) polarization free energy of solvation -27.667 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.785 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.452 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.513 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.87 seconds